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The map label for this gene is nusB

Identifier: 222526903

GI number: 222526903

Start: 4593451

End: 4593906

Strand: Reverse

Name: nusB

Synonym: Chy400_3681

Alternate gene names: 222526903

Gene position: 4593906-4593451 (Counterclockwise)

Preceding gene: 222526904

Following gene: 222526902

Centisome position: 87.19

GC content: 55.04

Gene sequence:

>456_bases
ATGGGGAGGGCAAGATTGGCAAGTCAGCGGCATCGGGTACGGATCGCAGCATTGCAGATCCTCTTTGAAGTTGATGAAAC
CGATCATGCGATTGATCAAGTGCTCGAGCGCCGGCTCACTGATGAACCAATGTCGCAGGAGAGTGCTGAGTTTCTCCGGC
GACTTGTGTTTGGCGCATGGGAGCATCGCTCGTATCTGGATCGGATCATCGAGGAGGCAGCACCAAACTGGCCGGTAGCT
CAGATGCCGGGAGTTGATAAAGCGGTGCTACGGATTGCCCTCTTCGAGTTACTGATTGATGATGTCGAGCGCACACCGAT
AAAAGCTGTGATCAACGAGGCGGTCGAACTGGCGAAACAGTTCGGCAGCGACAATTCGAGCCGGTTTGTCAATGGCGTGC
TCGGTACGGTGGTAACGCGCTACCTGGCCGACCGCGATGATACTGTTGAGGAATAG

Upstream 100 bases:

>100_bases
GGAATTCCGGGCAGGTCGCATTCATACCGGTTACGTGGCTGAATTACTGCGCCAATGGAAAGAAACACTCAATCCGGTAT
AAAACGGTGACGGGATGCGT

Downstream 100 bases:

>100_bases
CCGTCTTTGAAAGGAAGGAATGTAACTCGTATGGCTTCGCCTGAGATGGAAGAGCGCCTGCGCAAGATTATTGTCGATCA
GCTCGGTGTCGAGCCAGAGC

Product: NusB antitermination factor

Products: NA

Alternate protein names: Protein nusB

Number of amino acids: Translated: 151; Mature: 150

Protein sequence:

>151_residues
MGRARLASQRHRVRIAALQILFEVDETDHAIDQVLERRLTDEPMSQESAEFLRRLVFGAWEHRSYLDRIIEEAAPNWPVA
QMPGVDKAVLRIALFELLIDDVERTPIKAVINEAVELAKQFGSDNSSRFVNGVLGTVVTRYLADRDDTVEE

Sequences:

>Translated_151_residues
MGRARLASQRHRVRIAALQILFEVDETDHAIDQVLERRLTDEPMSQESAEFLRRLVFGAWEHRSYLDRIIEEAAPNWPVA
QMPGVDKAVLRIALFELLIDDVERTPIKAVINEAVELAKQFGSDNSSRFVNGVLGTVVTRYLADRDDTVEE
>Mature_150_residues
GRARLASQRHRVRIAALQILFEVDETDHAIDQVLERRLTDEPMSQESAEFLRRLVFGAWEHRSYLDRIIEEAAPNWPVAQ
MPGVDKAVLRIALFELLIDDVERTPIKAVINEAVELAKQFGSDNSSRFVNGVLGTVVTRYLADRDDTVEE

Specific function: Involved in the transcription termination process

COG id: COG0781

COG function: function code K; Transcription termination factor

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nusB family

Homologues:

Organism=Escherichia coli, GI1786618, Length=119, Percent_Identity=35.2941176470588, Blast_Score=66, Evalue=1e-12,

Paralogues:

None

Copy number: 900 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NUSB_CHLSY (B9LDT2)

Other databases:

- EMBL:   CP001364
- RefSeq:   YP_002571374.1
- GeneID:   7403868
- GenomeReviews:   CP001364_GR
- KEGG:   chl:Chy400_3681
- OMA:   SDNSSRF
- ProtClustDB:   CLSK973269
- HAMAP:   MF_00073
- InterPro:   IPR011605
- InterPro:   IPR006027
- Gene3D:   G3DSA:1.10.940.10
- TIGRFAMs:   TIGR01951

Pfam domain/function: PF01029 NusB; SSF48013 NusB_RsmB_TIM44

EC number: NA

Molecular weight: Translated: 17216; Mature: 17085

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRARLASQRHRVRIAALQILFEVDETDHAIDQVLERRLTDEPMSQESAEFLRRLVFGAW
CCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
EHRSYLDRIIEEAAPNWPVAQMPGVDKAVLRIALFELLIDDVERTPIKAVINEAVELAKQ
HHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
FGSDNSSRFVNGVLGTVVTRYLADRDDTVEE
HCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
GRARLASQRHRVRIAALQILFEVDETDHAIDQVLERRLTDEPMSQESAEFLRRLVFGAW
CCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
EHRSYLDRIIEEAAPNWPVAQMPGVDKAVLRIALFELLIDDVERTPIKAVINEAVELAKQ
HHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
FGSDNSSRFVNGVLGTVVTRYLADRDDTVEE
HCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA