| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222526901
Identifier: 222526901
GI number: 222526901
Start: 4591737
End: 4592621
Strand: Reverse
Name: 222526901
Synonym: Chy400_3679
Alternate gene names: NA
Gene position: 4592621-4591737 (Counterclockwise)
Preceding gene: 222526902
Following gene: 222526900
Centisome position: 87.16
GC content: 58.42
Gene sequence:
>885_bases ATGACTAGACGGATCGGCACCGACATAGCACGGGGTCGTATGGAGATATTTAACGTTCATCTCTTTGAGTTCATCCTGAT CGCCGGCCTTGCTCTGGTGCTCTTCGGGCCAGAACGCCTGCCGGAGTTAGGGCGCTTTGCCGGCAAGCAGGTGGCAAAGT TTCTTGCCTGGCAGCAACAGTCACCCGAATTGCAGATGATCAATGAAATGCGCAGCGAGTTTGAACGCGAGATTGCCCAG TTGCGCGATGAGCTGGTGCGTACCCGCAATCAACTCGATGTGCGTAATGATATGCAGGCACTCGCCGATGAGGTGAAGGC CGCCGGTCAGCAGGTGCAAAGTGCGCTGGACGAAGTTAAGACCGTCGGTCAGCAGGCGCAAAGTGTACTCGACGACGTCA AAACCGTTGGGCAACAGGCACAAAGTGTGCTCGATGACGCCGCAACCACTGCCAGACCGGTGATTCGCCCGCCGGCCCAG CCAATTGTGCCCGCAGCGACACCGATGGCAGCCTCGCCATCAGCCTCGGCGGTGGTGCAAACGATTACTGAGGAAGACCG TGCCTTGCTTGCTGAACCGGCACCTGCACCGGCTGAGGCGGGGACAACCTCTGCAACGCCATCGCCTGCGCCCCAGGAGC AGCCGGTGCTGTCCACGACAGCGGATCACGCTCCGGCGCAAGAGGTGCCTTTTCTCGACCCAAACGGTACTGCGCCGGTA TCTGTCTCTGCCGATGAACTGCATAACCTGCTCAACCGGCTGAACAGTCTGGCGGCTGAATTGCAGGCCATTGTCTTTCA GTTACAGGCTCGTGGTTTGCTTGATGAACACTGGCAACCGCAGATACCTGCATCACCTGCAACAGAGGAGACGGTAACCT CATGA
Upstream 100 bases:
>100_bases CAGCTCCCGGAGCAAAACAGCACCTTCAGCGATCACTATCTCGATGTGGGGGTGATCCCGTCCCTTCCACAATCCACAGC TCCGCTTCCTGTGGTAAGAT
Downstream 100 bases:
>100_bases CCACACGACCGGCAAGAGCTAATCGGGCCGACGATGCCTCAATGACCCTGGTTGAGCACCTGATCGAGCTGCGGAGCCGG CTGATTAAGTCTGGTATTGC
Product: sec-independent translocation protein mttA/Hcf106
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 294; Mature: 293
Protein sequence:
>294_residues MTRRIGTDIARGRMEIFNVHLFEFILIAGLALVLFGPERLPELGRFAGKQVAKFLAWQQQSPELQMINEMRSEFEREIAQ LRDELVRTRNQLDVRNDMQALADEVKAAGQQVQSALDEVKTVGQQAQSVLDDVKTVGQQAQSVLDDAATTARPVIRPPAQ PIVPAATPMAASPSASAVVQTITEEDRALLAEPAPAPAEAGTTSATPSPAPQEQPVLSTTADHAPAQEVPFLDPNGTAPV SVSADELHNLLNRLNSLAAELQAIVFQLQARGLLDEHWQPQIPASPATEETVTS
Sequences:
>Translated_294_residues MTRRIGTDIARGRMEIFNVHLFEFILIAGLALVLFGPERLPELGRFAGKQVAKFLAWQQQSPELQMINEMRSEFEREIAQ LRDELVRTRNQLDVRNDMQALADEVKAAGQQVQSALDEVKTVGQQAQSVLDDVKTVGQQAQSVLDDAATTARPVIRPPAQ PIVPAATPMAASPSASAVVQTITEEDRALLAEPAPAPAEAGTTSATPSPAPQEQPVLSTTADHAPAQEVPFLDPNGTAPV SVSADELHNLLNRLNSLAAELQAIVFQLQARGLLDEHWQPQIPASPATEETVTS >Mature_293_residues TRRIGTDIARGRMEIFNVHLFEFILIAGLALVLFGPERLPELGRFAGKQVAKFLAWQQQSPELQMINEMRSEFEREIAQL RDELVRTRNQLDVRNDMQALADEVKAAGQQVQSALDEVKTVGQQAQSVLDDVKTVGQQAQSVLDDAATTARPVIRPPAQP IVPAATPMAASPSASAVVQTITEEDRALLAEPAPAPAEAGTTSATPSPAPQEQPVLSTTADHAPAQEVPFLDPNGTAPVS VSADELHNLLNRLNSLAAELQAIVFQLQARGLLDEHWQPQIPASPATEETVTS
Specific function: Unknown
COG id: COG1826
COG function: function code U; Sec-independent protein secretion pathway components
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31721; Mature: 31590
Theoretical pI: Translated: 4.37; Mature: 4.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRRIGTDIARGRMEIFNVHLFEFILIAGLALVLFGPERLPELGRFAGKQVAKFLAWQQQ CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCC SPELQMINEMRSEFEREIAQLRDELVRTRNQLDVRNDMQALADEVKAAGQQVQSALDEVK CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TVGQQAQSVLDDVKTVGQQAQSVLDDAATTARPVIRPPAQPIVPAATPMAASPSASAVVQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH TITEEDRALLAEPAPAPAEAGTTSATPSPAPQEQPVLSTTADHAPAQEVPFLDPNGTAPV HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCC SVSADELHNLLNRLNSLAAELQAIVFQLQARGLLDEHWQPQIPASPATEETVTS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCC >Mature Secondary Structure TRRIGTDIARGRMEIFNVHLFEFILIAGLALVLFGPERLPELGRFAGKQVAKFLAWQQQ CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCC SPELQMINEMRSEFEREIAQLRDELVRTRNQLDVRNDMQALADEVKAAGQQVQSALDEVK CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TVGQQAQSVLDDVKTVGQQAQSVLDDAATTARPVIRPPAQPIVPAATPMAASPSASAVVQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH TITEEDRALLAEPAPAPAEAGTTSATPSPAPQEQPVLSTTADHAPAQEVPFLDPNGTAPV HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCC SVSADELHNLLNRLNSLAAELQAIVFQLQARGLLDEHWQPQIPASPATEETVTS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA