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The map label for this gene is 222526872

Identifier: 222526872

GI number: 222526872

Start: 4540322

End: 4541317

Strand: Direct

Name: 222526872

Synonym: Chy400_3648

Alternate gene names: NA

Gene position: 4540322-4541317 (Clockwise)

Preceding gene: 222526871

Following gene: 222526873

Centisome position: 86.17

GC content: 54.82

Gene sequence:

>996_bases
ATGGCTACGTTATACATTCAGGAACAGGGGACGACCGTGCGCAAACGGGACAATCAGATCATCATCATCCGTGACGGTAG
TATCCTGCAAGAAATACCGCTGAATAAAGTCGATCAGATCGTCCTCATGGGGCGTGGAGTCCAAATCTCAACGGCTCTCC
TGGTCGAATTGTTGCTACGGGGCATTCCCGTGATGATCACAAATCAACACGGTAGCCGTCATTATGCAACGCTAAGTGCG
GGTCCGTCGCGTTTTGGCCCATTACGTCTACGCCAGAGTCAACTGATTATCGATCCGGTCTGGTCACTCGAACTGGTTCG
TGGGATTGTGGCTGCAAAACTGGCCGCGCAACGCCTCATTCTTTCTGGGACAGGTTGGCCGTCTGCTGCTGGGGCCATTG
CTCAGATCGATACGGCTCTTCAGCGATTGCCCGCTGCCACGACCCTTGATATAGCGCGGGGCTTTGAAGGGGCAGCCGCC
GCAGCCTATTTCGGTGCCTGGCGCAATGTCTTTCAGCAAGGATGGGGATTTCAGGGGCGCGCCTTCCATCCGCCACCCGA
TCCTATCAATGCCCTGCTCTCATTTGGATATACCCTCTTGTTGCACGATGTCCTGAGCGCAGTTCAATTTACCGGCCTCG
ACCCGTATCTGGGGGTTTTTCATGCCGTTGAAACCGGTCGGCCATCATTAGCGCTTGACGTCATGGAAGAATTTCGACCA
CTGGTTGTTGATCGCCTGGTACTCAGCCTGATCACAACCGGCACAATAACGCGGAGTCAATTCGTGCGTACTCAATCTGA
GCAGCCAAACGCAATCTACCTGACTCCCGATGCCCGCAAACTGGTGGTCAGTCGCTATGAAGCCCTCATGAAGGCGCCAT
TCCGCCTGTCTGACGGCACGCAGACGGCCATGAGGCGGGTTATTCTCTTACAAACCCAAATGGTGGCCCGCATGATTCGT
GGCGAACAGGCTGCCTACGAAGGAGTCATTCGATGA

Upstream 100 bases:

>100_bases
GAACAGCGGTTACGCGAACACGTTGAACGACTACGCAGACCAGACAAACCACCGACATCTGATCGATAAGACGGATATTC
TGCCAATCAGGAGGTAGTGG

Downstream 100 bases:

>100_bases
AAATGTTCACAGTTATCAGTTATGATATCGTCGATGATCAGCGTCGCACCAGCGTGATGAAGGTGCTGAAAGGATACGGT
GTGCGCGTTCAGTACAGCGT

Product: CRISPR-associated protein Cas1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 331; Mature: 330

Protein sequence:

>331_residues
MATLYIQEQGTTVRKRDNQIIIIRDGSILQEIPLNKVDQIVLMGRGVQISTALLVELLLRGIPVMITNQHGSRHYATLSA
GPSRFGPLRLRQSQLIIDPVWSLELVRGIVAAKLAAQRLILSGTGWPSAAGAIAQIDTALQRLPAATTLDIARGFEGAAA
AAYFGAWRNVFQQGWGFQGRAFHPPPDPINALLSFGYTLLLHDVLSAVQFTGLDPYLGVFHAVETGRPSLALDVMEEFRP
LVVDRLVLSLITTGTITRSQFVRTQSEQPNAIYLTPDARKLVVSRYEALMKAPFRLSDGTQTAMRRVILLQTQMVARMIR
GEQAAYEGVIR

Sequences:

>Translated_331_residues
MATLYIQEQGTTVRKRDNQIIIIRDGSILQEIPLNKVDQIVLMGRGVQISTALLVELLLRGIPVMITNQHGSRHYATLSA
GPSRFGPLRLRQSQLIIDPVWSLELVRGIVAAKLAAQRLILSGTGWPSAAGAIAQIDTALQRLPAATTLDIARGFEGAAA
AAYFGAWRNVFQQGWGFQGRAFHPPPDPINALLSFGYTLLLHDVLSAVQFTGLDPYLGVFHAVETGRPSLALDVMEEFRP
LVVDRLVLSLITTGTITRSQFVRTQSEQPNAIYLTPDARKLVVSRYEALMKAPFRLSDGTQTAMRRVILLQTQMVARMIR
GEQAAYEGVIR
>Mature_330_residues
ATLYIQEQGTTVRKRDNQIIIIRDGSILQEIPLNKVDQIVLMGRGVQISTALLVELLLRGIPVMITNQHGSRHYATLSAG
PSRFGPLRLRQSQLIIDPVWSLELVRGIVAAKLAAQRLILSGTGWPSAAGAIAQIDTALQRLPAATTLDIARGFEGAAAA
AYFGAWRNVFQQGWGFQGRAFHPPPDPINALLSFGYTLLLHDVLSAVQFTGLDPYLGVFHAVETGRPSLALDVMEEFRPL
VVDRLVLSLITTGTITRSQFVRTQSEQPNAIYLTPDARKLVVSRYEALMKAPFRLSDGTQTAMRRVILLQTQMVARMIRG
EQAAYEGVIR

Specific function: Unknown

COG id: COG1518

COG function: function code L; Uncharacterized protein predicted to be involved in DNA repair

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002729
- InterPro:   IPR019858 [H]

Pfam domain/function: PF01867 DUF48 [H]

EC number: NA

Molecular weight: Translated: 36436; Mature: 36305

Theoretical pI: Translated: 10.41; Mature: 10.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATLYIQEQGTTVRKRDNQIIIIRDGSILQEIPLNKVDQIVLMGRGVQISTALLVELLLR
CEEEEEECCCCEEEECCCEEEEEECCCHHHHCCCCHHCEEEEECCCCCHHHHHHHHHHHC
GIPVMITNQHGSRHYATLSAGPSRFGPLRLRQSQLIIDPVWSLELVRGIVAAKLAAQRLI
CCCEEEECCCCCCEEEEECCCCCCCCCCEECCCCEEECCHHHHHHHHHHHHHHHHHHHHH
LSGTGWPSAAGAIAQIDTALQRLPAATTLDIARGFEGAAAAAYFGAWRNVFQQGWGFQGR
EECCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCC
AFHPPPDPINALLSFGYTLLLHDVLSAVQFTGLDPYLGVFHAVETGRPSLALDVMEEFRP
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHH
LVVDRLVLSLITTGTITRSQFVRTQSEQPNAIYLTPDARKLVVSRYEALMKAPFRLSDGT
HHHHHHHHHHHHCCCHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHHHHCCCCCCCCH
QTAMRRVILLQTQMVARMIRGEQAAYEGVIR
HHHHHHHHHHHHHHHHHHHHCCHHHHHCCCC
>Mature Secondary Structure 
ATLYIQEQGTTVRKRDNQIIIIRDGSILQEIPLNKVDQIVLMGRGVQISTALLVELLLR
EEEEEECCCCEEEECCCEEEEEECCCHHHHCCCCHHCEEEEECCCCCHHHHHHHHHHHC
GIPVMITNQHGSRHYATLSAGPSRFGPLRLRQSQLIIDPVWSLELVRGIVAAKLAAQRLI
CCCEEEECCCCCCEEEEECCCCCCCCCCEECCCCEEECCHHHHHHHHHHHHHHHHHHHHH
LSGTGWPSAAGAIAQIDTALQRLPAATTLDIARGFEGAAAAAYFGAWRNVFQQGWGFQGR
EECCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCC
AFHPPPDPINALLSFGYTLLLHDVLSAVQFTGLDPYLGVFHAVETGRPSLALDVMEEFRP
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHH
LVVDRLVLSLITTGTITRSQFVRTQSEQPNAIYLTPDARKLVVSRYEALMKAPFRLSDGT
HHHHHHHHHHHHCCCHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHHHHCCCCCCCCH
QTAMRRVILLQTQMVARMIRGEQAAYEGVIR
HHHHHHHHHHHHHHHHHHHHCCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]