| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222526785
Identifier: 222526785
GI number: 222526785
Start: 4437371
End: 4438093
Strand: Reverse
Name: 222526785
Synonym: Chy400_3559
Alternate gene names: NA
Gene position: 4438093-4437371 (Counterclockwise)
Preceding gene: 222526787
Following gene: 222526783
Centisome position: 84.23
GC content: 58.09
Gene sequence:
>723_bases TTGACACGTTGGCTCTGGCTTATCTGGCTCGCTGTGCTGGGGGTAGTCTGTCTAGGGGGATTGCTGGCCTGGCAGCGCGC CCGTCATTTTGAACGGCTGTTTCATCTGACTCGGCTTGATCCGCTGGGTTTGACCGCTATCAGCAATGATCGCTCGCCAT CAGCGCGTATCGTGATGTTCGGTGACTCGCGAGCCGCAGCATGGCCACCACCGGACGGCTTTACGATGGTCAACCGCGGT GTTCCCGGCCATACTAGCGCCCAGGCGCGCCTGCGCTACCGGCTCCATGTTAGTCCGCTCAAGCCAGAACTGGTGATTAT GCAGGTCGGTGTCAATGATCTGGCGGCGCTGGCAATTCTGGACGACGACGATGACAGCGAGGCGATTACGCAGGCAACTA TTGCCAATCTGCGCGAGATGCTGACCCTCGCCCGCAATGATGGCAGTCGGGTTATCCTGACCACCATCTTTCCCCTTGGC CCAAATGCGCTTGAACGGCTCGATCCATCAACCAGTCGGATCACGGCGGCGATTACCCGCGTCAATCAGGCAATCCATGC TATGGCAGCCCCAGATGTCATTATCTTCGACAGTGCAGCGATCCTGGCCGATGAAACGGGGTATGTGGCTGAGCCGTTTC GTGATGATCTGCTTCACATCAATGCAGCGGGGTACAGGTTGTTGAATGAGCGGTTGGTCACGCTCTTGCGCGAACTGGAG TGA
Upstream 100 bases:
>100_bases ATTTCCCAACCTCCGGTTCTTGCACGTGCGTTTCAGTATTTGTTGTGGTAAAAAAGATTGTGCAGTACGCAAAGATGATG ACGACTTCGGAGGCTCGCAA
Downstream 100 bases:
>100_bases GTGCAACACGGCTTCATCAGTGTTGCCGCAGCTCGAACGGTACGGCTGCAAACGAGGCGAAGACCGGCACCTCCTGGCCC AGCGTGATACCAGACGGATC
Product: G-D-S-L family lipolytic protein
Products: NA
Alternate protein names: GDSL-Like Lipase/Acylhydrolase Domain Protein; GDSL Family Lipase; Lipolytic Protein G-D-S-L Family
Number of amino acids: Translated: 240; Mature: 239
Protein sequence:
>240_residues MTRWLWLIWLAVLGVVCLGGLLAWQRARHFERLFHLTRLDPLGLTAISNDRSPSARIVMFGDSRAAAWPPPDGFTMVNRG VPGHTSAQARLRYRLHVSPLKPELVIMQVGVNDLAALAILDDDDDSEAITQATIANLREMLTLARNDGSRVILTTIFPLG PNALERLDPSTSRITAAITRVNQAIHAMAAPDVIIFDSAAILADETGYVAEPFRDDLLHINAAGYRLLNERLVTLLRELE
Sequences:
>Translated_240_residues MTRWLWLIWLAVLGVVCLGGLLAWQRARHFERLFHLTRLDPLGLTAISNDRSPSARIVMFGDSRAAAWPPPDGFTMVNRG VPGHTSAQARLRYRLHVSPLKPELVIMQVGVNDLAALAILDDDDDSEAITQATIANLREMLTLARNDGSRVILTTIFPLG PNALERLDPSTSRITAAITRVNQAIHAMAAPDVIIFDSAAILADETGYVAEPFRDDLLHINAAGYRLLNERLVTLLRELE >Mature_239_residues TRWLWLIWLAVLGVVCLGGLLAWQRARHFERLFHLTRLDPLGLTAISNDRSPSARIVMFGDSRAAAWPPPDGFTMVNRGV PGHTSAQARLRYRLHVSPLKPELVIMQVGVNDLAALAILDDDDDSEAITQATIANLREMLTLARNDGSRVILTTIFPLGP NALERLDPSTSRITAAITRVNQAIHAMAAPDVIIFDSAAILADETGYVAEPFRDDLLHINAAGYRLLNERLVTLLRELE
Specific function: Unknown
COG id: COG2755
COG function: function code E; Lysophospholipase L1 and related esterases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26531; Mature: 26400
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRWLWLIWLAVLGVVCLGGLLAWQRARHFERLFHLTRLDPLGLTAISNDRSPSARIVMF CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCEEEEEE GDSRAAAWPPPDGFTMVNRGVPGHTSAQARLRYRLHVSPLKPELVIMQVGVNDLAALAIL ECCCCCCCCCCCCCEEEECCCCCCCCHHEEEEEEEEECCCCCEEEEEEECCCCEEEEEEE DDDDDSEAITQATIANLREMLTLARNDGSRVILTTIFPLGPNALERLDPSTSRITAAITR ECCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCHHHHHCCCCHHHHHHHHHH VNQAIHAMAAPDVIIFDSAAILADETGYVAEPFRDDLLHINAAGYRLLNERLVTLLRELE HHHHHHHHCCCCEEEECCCEEEECCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TRWLWLIWLAVLGVVCLGGLLAWQRARHFERLFHLTRLDPLGLTAISNDRSPSARIVMF CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCEEEEEE GDSRAAAWPPPDGFTMVNRGVPGHTSAQARLRYRLHVSPLKPELVIMQVGVNDLAALAIL ECCCCCCCCCCCCCEEEECCCCCCCCHHEEEEEEEEECCCCCEEEEEEECCCCEEEEEEE DDDDDSEAITQATIANLREMLTLARNDGSRVILTTIFPLGPNALERLDPSTSRITAAITR ECCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCHHHHHCCCCHHHHHHHHHH VNQAIHAMAAPDVIIFDSAAILADETGYVAEPFRDDLLHINAAGYRLLNERLVTLLRELE HHHHHHHHCCCCEEEECCCEEEECCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA