| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is sfsA
Identifier: 222526784
GI number: 222526784
Start: 4436575
End: 4437354
Strand: Direct
Name: sfsA
Synonym: Chy400_3558
Alternate gene names: 222526784
Gene position: 4436575-4437354 (Clockwise)
Preceding gene: 222526773
Following gene: 222526786
Centisome position: 84.2
GC content: 60.13
Gene sequence:
>780_bases ATGGTGACAGGGCACGGAACAGGACATCACGGACAATCGCCAGTACGGGTTCCGCTTTCCAGTGGAGCGCCACTGGTTGA GGCGACGTTTGCCAGTCGTCCGAGCCAGTTTCTGGTCGAAGCCCAGATGGGTGGGCGAATGGTGCGTGCGCATCTCGCCG ACCGGGGGCGATTAACCGATTTGCTAACACCAGGAGCGCGCCTGTTGCTCGCCTCACGCGAGGAAATTGGGCGGAAGACG GCATTTCAGGTGGTAGCAGTCTATCAGGATGGCGACCTGGTCTCGCTTGACACCCAATTACCCAATCGCCTGGTGGCGGC AGCATTGTCGCTCGGTGCGCTTCCCCAATTCGCGCGTTATTCGCGGGTACAGCGAGAAGTACAGCTTGGCCCGCATCGCA TCGATTTTCGCTTAAGTGAAGGACTGGATACCTGTCTGCTGGAGGTCAAGTCGGTGACCCGGCTGGTTGATGGGATTGCC GTCTTTCCCGACGCACCGACTGAGCGTGGGGGGCGCCATCTGGAGCTACTGATCAATGCTGCCCGGAATGGTCAGCGGGC GGCTGTAGTGTTCATCATTCAACGCTCGCGTGGTTGCGCATTTGCCCCCGATGTGACCGTTGATCCGGCGTTCAGCCGGT CGTTACGAGAAGCACGCTCGGTTGGTGTTGAGATATACGCCTACCGTTGCCCGGTCGATCCGTCTGGTATCACGCTGGGC CAGGAGGTGCCGGTCTTCGCCTCGTTTGCAGCCGTACCGTTCGAGCTGCGGCAACACTGA
Upstream 100 bases:
>100_bases TACCATTGCGAGGAACGATCCTCGATGACTGCGTTGCATATTGTGATAGCATTCACTGGGAATGTGCATGATTTGATACA AGCCGTGTTATACTTAGGAT
Downstream 100 bases:
>100_bases TGAAGCCGTGTTGCACTCACTCCAGTTCGCGCAAGAGCGTGACCAACCGCTCATTCAACAACCTGTACCCCGCTGCATTG ATGTGAAGCAGATCATCACG
Product: sugar fermentation stimulation protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 259; Mature: 259
Protein sequence:
>259_residues MVTGHGTGHHGQSPVRVPLSSGAPLVEATFASRPSQFLVEAQMGGRMVRAHLADRGRLTDLLTPGARLLLASREEIGRKT AFQVVAVYQDGDLVSLDTQLPNRLVAAALSLGALPQFARYSRVQREVQLGPHRIDFRLSEGLDTCLLEVKSVTRLVDGIA VFPDAPTERGGRHLELLINAARNGQRAAVVFIIQRSRGCAFAPDVTVDPAFSRSLREARSVGVEIYAYRCPVDPSGITLG QEVPVFASFAAVPFELRQH
Sequences:
>Translated_259_residues MVTGHGTGHHGQSPVRVPLSSGAPLVEATFASRPSQFLVEAQMGGRMVRAHLADRGRLTDLLTPGARLLLASREEIGRKT AFQVVAVYQDGDLVSLDTQLPNRLVAAALSLGALPQFARYSRVQREVQLGPHRIDFRLSEGLDTCLLEVKSVTRLVDGIA VFPDAPTERGGRHLELLINAARNGQRAAVVFIIQRSRGCAFAPDVTVDPAFSRSLREARSVGVEIYAYRCPVDPSGITLG QEVPVFASFAAVPFELRQH >Mature_259_residues MVTGHGTGHHGQSPVRVPLSSGAPLVEATFASRPSQFLVEAQMGGRMVRAHLADRGRLTDLLTPGARLLLASREEIGRKT AFQVVAVYQDGDLVSLDTQLPNRLVAAALSLGALPQFARYSRVQREVQLGPHRIDFRLSEGLDTCLLEVKSVTRLVDGIA VFPDAPTERGGRHLELLINAARNGQRAAVVFIIQRSRGCAFAPDVTVDPAFSRSLREARSVGVEIYAYRCPVDPSGITLG QEVPVFASFAAVPFELRQH
Specific function: Probable Regulatory Factor Involved In Maltose Metabolism. [C]
COG id: COG1489
COG function: function code R; DNA-binding protein, stimulates sugar fermentation
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sfsA family
Homologues:
Organism=Escherichia coli, GI1786340, Length=227, Percent_Identity=33.0396475770925, Blast_Score=118, Evalue=4e-28,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): SFSA_CHLAA (A9WJ28)
Other databases:
- EMBL: CP000909 - RefSeq: YP_001636876.1 - GeneID: 5825101 - GenomeReviews: CP000909_GR - KEGG: cau:Caur_3299 - HOGENOM: HBG655520 - OMA: NTGSMLN - ProtClustDB: CLSK943493 - HAMAP: MF_00095 - InterPro: IPR005224 - TIGRFAMs: TIGR00230
Pfam domain/function: PF03749 SfsA
EC number: NA
Molecular weight: Translated: 28069; Mature: 28069
Theoretical pI: Translated: 9.29; Mature: 9.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVTGHGTGHHGQSPVRVPLSSGAPLVEATFASRPSQFLVEAQMGGRMVRAHLADRGRLTD CCCCCCCCCCCCCCEEEECCCCCCEEEEHHHCCCHHEEEEHHHCCEEEEHHHHCCCCCHH LLTPGARLLLASREEIGRKTAFQVVAVYQDGDLVSLDTQLPNRLVAAALSLGALPQFARY HCCCCHHEEEECHHHHCCCEEEEEEEEEECCCEEEECCCCHHHHHHHHHHHCCCHHHHHH SRVQREVQLGPHRIDFRLSEGLDTCLLEVKSVTRLVDGIAVFPDAPTERGGRHLELLINA HHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHHHHCEEECCCCCCCCCCCEEEEEEEC ARNGQRAAVVFIIQRSRGCAFAPDVTVDPAFSRSLREARSVGVEIYAYRCPVDPSGITLG CCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCC QEVPVFASFAAVPFELRQH CCCCHHHHHHHCCHHHCCC >Mature Secondary Structure MVTGHGTGHHGQSPVRVPLSSGAPLVEATFASRPSQFLVEAQMGGRMVRAHLADRGRLTD CCCCCCCCCCCCCCEEEECCCCCCEEEEHHHCCCHHEEEEHHHCCEEEEHHHHCCCCCHH LLTPGARLLLASREEIGRKTAFQVVAVYQDGDLVSLDTQLPNRLVAAALSLGALPQFARY HCCCCHHEEEECHHHHCCCEEEEEEEEEECCCEEEECCCCHHHHHHHHHHHCCCHHHHHH SRVQREVQLGPHRIDFRLSEGLDTCLLEVKSVTRLVDGIAVFPDAPTERGGRHLELLINA HHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHHHHCEEECCCCCCCCCCCEEEEEEEC ARNGQRAAVVFIIQRSRGCAFAPDVTVDPAFSRSLREARSVGVEIYAYRCPVDPSGITLG CCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCC QEVPVFASFAAVPFELRQH CCCCHHHHHHHCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA