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The map label for this gene is kaiB [H]

Identifier: 222526761

GI number: 222526761

Start: 4403513

End: 4403794

Strand: Direct

Name: kaiB [H]

Synonym: Chy400_3535

Alternate gene names: 222526761

Gene position: 4403513-4403794 (Clockwise)

Preceding gene: 222526760

Following gene: 222526762

Centisome position: 83.57

GC content: 49.65

Gene sequence:

>282_bases
GTGAGTAAAATTGTTTTGCAGCTCTATATTGCAGGTCACACACCTCGTGCCGAACGTGCAATTGGCACGTTGCGTCGTAT
GATTGAGTCGGAACTGGCCGGTTACGAGTGTGATTTGACGATCATTGATGTTCTTGCCAACCCGCAGCAGGCAGAAGATC
AGAAGATTCTGGCCACTCCGACACTGATTAAGAGTTCGCCTCCACCATACCGGCGGGTGATTGGCGATCTTTCCAGTGTC
ACCGATCTGTTGCAAGTGTTGAACTTACCTCCAAAATCGTGA

Upstream 100 bases:

>100_bases
AGCTAATGGGTTATCTTGCATCGTACTATCGAGCAGTAGCGGCGGGTGAATTGCGTGATCAGGATAAGTAGTAAGAGTTG
ACTGCTGGCGGGATGAGTCT

Downstream 100 bases:

>100_bases
GTTTGCTATTCATTGGTACCAACAAGGAGCAATCTGGTGTGCGCTGATCAGATCGAACGCCTGCCTACCGGAATTACCGG
TTTTGACCATATTGCTAACG

Product: KaiB domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 93; Mature: 92

Protein sequence:

>93_residues
MSKIVLQLYIAGHTPRAERAIGTLRRMIESELAGYECDLTIIDVLANPQQAEDQKILATPTLIKSSPPPYRRVIGDLSSV
TDLLQVLNLPPKS

Sequences:

>Translated_93_residues
MSKIVLQLYIAGHTPRAERAIGTLRRMIESELAGYECDLTIIDVLANPQQAEDQKILATPTLIKSSPPPYRRVIGDLSSV
TDLLQVLNLPPKS
>Mature_92_residues
SKIVLQLYIAGHTPRAERAIGTLRRMIESELAGYECDLTIIDVLANPQQAEDQKILATPTLIKSSPPPYRRVIGDLSSVT
DLLQVLNLPPKS

Specific function: Component of the kaiABC clock protein complex, which constitutes the main circadian regulator in cyanobacteria. The kaiABC complex may act as a promoter-non-specific transcription regulator that represses transcription, possibly by acting on the state of

COG id: COG0526

COG function: function code OC; Thiol-disulfide isomerase and thioredoxins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the kaiB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013474
- InterPro:   IPR011649
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF07689 KaiB [H]

EC number: NA

Molecular weight: Translated: 10254; Mature: 10123

Theoretical pI: Translated: 7.35; Mature: 7.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKIVLQLYIAGHTPRAERAIGTLRRMIESELAGYECDLTIIDVLANPQQAEDQKILATP
CCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHEEECCCCCCCCCCEEECCC
TLIKSSPPPYRRVIGDLSSVTDLLQVLNLPPKS
HHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
SKIVLQLYIAGHTPRAERAIGTLRRMIESELAGYECDLTIIDVLANPQQAEDQKILATP
CCEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHEEECCCCCCCCCCEEECCC
TLIKSSPPPYRRVIGDLSSVTDLLQVLNLPPKS
HHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA