| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is dnaJ [H]
Identifier: 222526744
GI number: 222526744
Start: 4381223
End: 4382092
Strand: Reverse
Name: dnaJ [H]
Synonym: Chy400_3518
Alternate gene names: 222526744
Gene position: 4382092-4381223 (Counterclockwise)
Preceding gene: 222526746
Following gene: 222526743
Centisome position: 83.17
GC content: 53.22
Gene sequence:
>870_bases ATGAAGGATTATTATCAGGTATTGGGGGTAAGCCGTACCGCCAGCGACGAAGAGATAAAGCAGGCATACCGACGGCTGGC TCGAAAGTACCACCCTGACGTTAATCCAGGTGATCCGAAAGCTGAAGCACGCTTCAAAGAGATTAACGAAGCCTATCAGG TGCTATCCGACAAAGAGCAACGTGCGAAATATGACCGCTTTGGCAGTGATTTTCGCCGTTACGAACAAACCGGGTTTGGC GGTTTTGATTACGGTAGTCAGGATTTTGCTGATTTATTTGAGACACTCTTTGGGCAGCGCCGCACAACCGGCGGTGGGTT CAATGTACGTCTCGATGGGCAAGATGTTGAACAACCGGTTGAGCTGACGCTTGAGGAAGCGTATAACGGTACCCAACGCA CAGTTCAGTTTTCAAACCCTAACGGCACACCACGCACAATTACCGTAAAGATTCCTGCCGGCATCGATACCGGCAAACGG GTGCGCGTGCCGGGGGAAGGCGCGCCTGGTCTCAATGGTGGTCGGCGTGGCGATCTCTACCTGGTCGTGACCGTCAAACC GCACGAGCGGTTTGAACGTAAGGGCAATGATCTGCACACGACTATCCCGGTGAGTATGTATACCCTGCTACTGGGAGGAC AAACCCAGATTCCACTGCTGTCAGGTAAAACTCTGACCCTGAATATTCCACCGCAAACCCAGAACGGACGGGTATTTCGT ATTGCCGGTCAGGGGATGCCGCTGATGCATAGTCATCAGCATGGCGATCTCTACGTTACCGTCAGCGCCGTTTTGCCGAC CAACCTTTCGCCGCAGGCACGCAAGCTGGTGGAGGAATTGCAGCAACTGACGGAAGGAGATAGGAGATAG
Upstream 100 bases:
>100_bases GATCTTGACGTTGCCGACAAGCCTCTCTACAATCAAACATAAGCCCTCAGCAGCACAAGACCGGTATGCTGCGCTTCCAT TCACGGTGCGAGGCACATCT
Downstream 100 bases:
>100_bases GAGATAGGAGATAGGAGATAGGAGATAGGAGATAGGAGATAGAAGATAGAAGATAGAAGATAGGAGATAGGAGAGAGGGG AAGAGGGTGGAGAAATTTGT
Product: chaperone DnaJ domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 289; Mature: 289
Protein sequence:
>289_residues MKDYYQVLGVSRTASDEEIKQAYRRLARKYHPDVNPGDPKAEARFKEINEAYQVLSDKEQRAKYDRFGSDFRRYEQTGFG GFDYGSQDFADLFETLFGQRRTTGGGFNVRLDGQDVEQPVELTLEEAYNGTQRTVQFSNPNGTPRTITVKIPAGIDTGKR VRVPGEGAPGLNGGRRGDLYLVVTVKPHERFERKGNDLHTTIPVSMYTLLLGGQTQIPLLSGKTLTLNIPPQTQNGRVFR IAGQGMPLMHSHQHGDLYVTVSAVLPTNLSPQARKLVEELQQLTEGDRR
Sequences:
>Translated_289_residues MKDYYQVLGVSRTASDEEIKQAYRRLARKYHPDVNPGDPKAEARFKEINEAYQVLSDKEQRAKYDRFGSDFRRYEQTGFG GFDYGSQDFADLFETLFGQRRTTGGGFNVRLDGQDVEQPVELTLEEAYNGTQRTVQFSNPNGTPRTITVKIPAGIDTGKR VRVPGEGAPGLNGGRRGDLYLVVTVKPHERFERKGNDLHTTIPVSMYTLLLGGQTQIPLLSGKTLTLNIPPQTQNGRVFR IAGQGMPLMHSHQHGDLYVTVSAVLPTNLSPQARKLVEELQQLTEGDRR >Mature_289_residues MKDYYQVLGVSRTASDEEIKQAYRRLARKYHPDVNPGDPKAEARFKEINEAYQVLSDKEQRAKYDRFGSDFRRYEQTGFG GFDYGSQDFADLFETLFGQRRTTGGGFNVRLDGQDVEQPVELTLEEAYNGTQRTVQFSNPNGTPRTITVKIPAGIDTGKR VRVPGEGAPGLNGGRRGDLYLVVTVKPHERFERKGNDLHTTIPVSMYTLLLGGQTQIPLLSGKTLTLNIPPQTQNGRVFR IAGQGMPLMHSHQHGDLYVTVSAVLPTNLSPQARKLVEELQQLTEGDRR
Specific function: Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion. Unfolded proteins bind initially to dnaJ; upon
COG id: COG0484
COG function: function code O; DnaJ-class molecular chaperone with C-terminal Zn finger domain
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 J domain [H]
Homologues:
Organism=Homo sapiens, GI5453690, Length=337, Percent_Identity=30.5637982195846, Blast_Score=137, Evalue=2e-32, Organism=Homo sapiens, GI6631085, Length=336, Percent_Identity=29.1666666666667, Blast_Score=132, Evalue=3e-31, Organism=Homo sapiens, GI201862587, Length=343, Percent_Identity=29.7376093294461, Blast_Score=129, Evalue=3e-30, Organism=Homo sapiens, GI56549115, Length=343, Percent_Identity=29.7376093294461, Blast_Score=129, Evalue=4e-30, Organism=Homo sapiens, GI201862518, Length=343, Percent_Identity=29.7376093294461, Blast_Score=129, Evalue=4e-30, Organism=Homo sapiens, GI7706495, Length=330, Percent_Identity=30.6060606060606, Blast_Score=125, Evalue=4e-29, Organism=Homo sapiens, GI39204547, Length=312, Percent_Identity=29.1666666666667, Blast_Score=123, Evalue=2e-28, Organism=Homo sapiens, GI205360838, Length=146, Percent_Identity=40.4109589041096, Blast_Score=100, Evalue=1e-21, Organism=Homo sapiens, GI205360840, Length=146, Percent_Identity=40.4109589041096, Blast_Score=100, Evalue=1e-21, Organism=Homo sapiens, GI194306642, Length=112, Percent_Identity=48.2142857142857, Blast_Score=92, Evalue=8e-19, Organism=Homo sapiens, GI194306640, Length=112, Percent_Identity=48.2142857142857, Blast_Score=92, Evalue=8e-19, Organism=Homo sapiens, GI47777312, Length=101, Percent_Identity=49.5049504950495, Blast_Score=87, Evalue=2e-17, Organism=Homo sapiens, GI24308127, Length=93, Percent_Identity=44.0860215053763, Blast_Score=87, Evalue=2e-17, Organism=Homo sapiens, GI23503241, Length=74, Percent_Identity=54.0540540540541, Blast_Score=85, Evalue=8e-17, Organism=Homo sapiens, GI29126218, Length=65, Percent_Identity=53.8461538461538, Blast_Score=84, Evalue=2e-16, Organism=Homo sapiens, GI4504511, Length=134, Percent_Identity=38.0597014925373, Blast_Score=83, Evalue=3e-16, Organism=Homo sapiens, GI4885495, Length=68, Percent_Identity=57.3529411764706, Blast_Score=83, Evalue=4e-16, Organism=Homo sapiens, GI27151736, Length=108, Percent_Identity=41.6666666666667, Blast_Score=82, Evalue=4e-16, Organism=Homo sapiens, GI21553335, Length=106, Percent_Identity=42.4528301886792, Blast_Score=82, Evalue=5e-16, Organism=Homo sapiens, GI88501736, Length=69, Percent_Identity=55.0724637681159, Blast_Score=82, Evalue=5e-16, Organism=Homo sapiens, GI9558755, Length=131, Percent_Identity=41.2213740458015, Blast_Score=82, Evalue=5e-16, Organism=Homo sapiens, GI194328758, Length=137, Percent_Identity=37.956204379562, Blast_Score=82, Evalue=6e-16, Organism=Homo sapiens, GI194328760, Length=137, Percent_Identity=37.956204379562, Blast_Score=82, Evalue=6e-16, Organism=Homo sapiens, GI17388799, Length=68, Percent_Identity=57.3529411764706, Blast_Score=82, Evalue=6e-16, Organism=Homo sapiens, GI56687498, Length=66, Percent_Identity=56.0606060606061, Blast_Score=82, Evalue=8e-16, Organism=Homo sapiens, GI45504382, Length=65, Percent_Identity=50.7692307692308, Blast_Score=80, Evalue=2e-15, Organism=Homo sapiens, GI72534740, Length=112, Percent_Identity=41.9642857142857, Blast_Score=79, Evalue=5e-15, Organism=Homo sapiens, GI22749377, Length=116, Percent_Identity=41.3793103448276, Blast_Score=78, Evalue=1e-14, Organism=Homo sapiens, GI5031741, Length=139, Percent_Identity=40.2877697841727, Blast_Score=76, Evalue=3e-14, Organism=Homo sapiens, GI68077168, Length=90, Percent_Identity=50, Blast_Score=71, Evalue=9e-13, Organism=Homo sapiens, GI68077166, Length=90, Percent_Identity=50, Blast_Score=71, Evalue=1e-12, Organism=Homo sapiens, GI217035105, Length=71, Percent_Identity=50.7042253521127, Blast_Score=68, Evalue=1e-11, Organism=Homo sapiens, GI8922563, Length=65, Percent_Identity=43.0769230769231, Blast_Score=66, Evalue=5e-11, Organism=Escherichia coli, GI1787235, Length=295, Percent_Identity=40.3389830508475, Blast_Score=206, Evalue=1e-54, Organism=Escherichia coli, GI1786197, Length=346, Percent_Identity=35.8381502890173, Blast_Score=194, Evalue=4e-51, Organism=Caenorhabditis elegans, GI17534355, Length=327, Percent_Identity=29.6636085626911, Blast_Score=129, Evalue=2e-30, Organism=Caenorhabditis elegans, GI212645553, Length=332, Percent_Identity=31.0240963855422, Blast_Score=119, Evalue=1e-27, Organism=Caenorhabditis elegans, GI17554644, Length=81, Percent_Identity=51.8518518518518, Blast_Score=84, Evalue=1e-16, Organism=Caenorhabditis elegans, GI115532378, Length=89, Percent_Identity=47.1910112359551, Blast_Score=80, Evalue=2e-15, Organism=Caenorhabditis elegans, GI115532476, Length=79, Percent_Identity=50.6329113924051, Blast_Score=78, Evalue=7e-15, Organism=Caenorhabditis elegans, GI17553098, Length=64, Percent_Identity=51.5625, Blast_Score=72, Evalue=3e-13, Organism=Caenorhabditis elegans, GI17553096, Length=64, Percent_Identity=51.5625, Blast_Score=72, Evalue=3e-13, Organism=Caenorhabditis elegans, GI17568643, Length=65, Percent_Identity=53.8461538461538, Blast_Score=71, Evalue=8e-13, Organism=Caenorhabditis elegans, GI17507263, Length=63, Percent_Identity=52.3809523809524, Blast_Score=70, Evalue=1e-12, Organism=Caenorhabditis elegans, GI86563276, Length=104, Percent_Identity=41.3461538461538, Blast_Score=70, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17538236, Length=118, Percent_Identity=37.2881355932203, Blast_Score=69, Evalue=4e-12, Organism=Saccharomyces cerevisiae, GI6322194, Length=96, Percent_Identity=51.0416666666667, Blast_Score=92, Evalue=9e-20, Organism=Saccharomyces cerevisiae, GI6324265, Length=137, Percent_Identity=40.8759124087591, Blast_Score=89, Evalue=1e-18, Organism=Saccharomyces cerevisiae, GI6323870, Length=69, Percent_Identity=50.7246376811594, Blast_Score=82, Evalue=7e-17, Organism=Saccharomyces cerevisiae, GI6320888, Length=156, Percent_Identity=35.8974358974359, Blast_Score=80, Evalue=3e-16, Organism=Saccharomyces cerevisiae, GI6323813, Length=126, Percent_Identity=40.4761904761905, Blast_Score=77, Evalue=2e-15, Organism=Saccharomyces cerevisiae, GI6323119, Length=140, Percent_Identity=37.1428571428571, Blast_Score=74, Evalue=3e-14, Organism=Saccharomyces cerevisiae, GI6322388, Length=77, Percent_Identity=46.7532467532467, Blast_Score=68, Evalue=2e-12, Organism=Saccharomyces cerevisiae, GI6324103, Length=63, Percent_Identity=52.3809523809524, Blast_Score=66, Evalue=6e-12, Organism=Saccharomyces cerevisiae, GI6324321, Length=69, Percent_Identity=44.9275362318841, Blast_Score=66, Evalue=6e-12, Organism=Saccharomyces cerevisiae, GI6324252, Length=65, Percent_Identity=46.1538461538462, Blast_Score=66, Evalue=7e-12, Organism=Drosophila melanogaster, GI24658562, Length=336, Percent_Identity=32.1428571428571, Blast_Score=134, Evalue=7e-32, Organism=Drosophila melanogaster, GI24658555, Length=336, Percent_Identity=32.1428571428571, Blast_Score=134, Evalue=7e-32, Organism=Drosophila melanogaster, GI85726398, Length=355, Percent_Identity=31.2676056338028, Blast_Score=133, Evalue=1e-31, Organism=Drosophila melanogaster, GI18858081, Length=347, Percent_Identity=29.1066282420749, Blast_Score=123, Evalue=1e-28, Organism=Drosophila melanogaster, GI19920464, Length=308, Percent_Identity=29.2207792207792, Blast_Score=122, Evalue=2e-28, Organism=Drosophila melanogaster, GI45549272, Length=363, Percent_Identity=25.8953168044077, Blast_Score=107, Evalue=1e-23, Organism=Drosophila melanogaster, GI45552813, Length=363, Percent_Identity=25.8953168044077, Blast_Score=107, Evalue=1e-23, Organism=Drosophila melanogaster, GI45552811, Length=363, Percent_Identity=25.068870523416, Blast_Score=93, Evalue=2e-19, Organism=Drosophila melanogaster, GI24654066, Length=71, Percent_Identity=54.9295774647887, Blast_Score=87, Evalue=9e-18, Organism=Drosophila melanogaster, GI24654070, Length=71, Percent_Identity=54.9295774647887, Blast_Score=87, Evalue=9e-18, Organism=Drosophila melanogaster, GI24654068, Length=71, Percent_Identity=54.9295774647887, Blast_Score=87, Evalue=9e-18, Organism=Drosophila melanogaster, GI24654072, Length=71, Percent_Identity=54.9295774647887, Blast_Score=87, Evalue=9e-18, Organism=Drosophila melanogaster, GI20129487, Length=137, Percent_Identity=43.7956204379562, Blast_Score=86, Evalue=2e-17, Organism=Drosophila melanogaster, GI24584014, Length=137, Percent_Identity=43.7956204379562, Blast_Score=86, Evalue=2e-17, Organism=Drosophila melanogaster, GI161077138, Length=66, Percent_Identity=56.0606060606061, Blast_Score=81, Evalue=7e-16, Organism=Drosophila melanogaster, GI24641698, Length=64, Percent_Identity=54.6875, Blast_Score=78, Evalue=8e-15, Organism=Drosophila melanogaster, GI24641696, Length=64, Percent_Identity=54.6875, Blast_Score=78, Evalue=8e-15, Organism=Drosophila melanogaster, GI24668492, Length=69, Percent_Identity=50.7246376811594, Blast_Score=77, Evalue=9e-15, Organism=Drosophila melanogaster, GI17737735, Length=65, Percent_Identity=49.2307692307692, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI28574723, Length=65, Percent_Identity=49.2307692307692, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI24668523, Length=65, Percent_Identity=49.2307692307692, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI17648033, Length=112, Percent_Identity=40.1785714285714, Blast_Score=76, Evalue=3e-14, Organism=Drosophila melanogaster, GI24584630, Length=112, Percent_Identity=40.1785714285714, Blast_Score=76, Evalue=3e-14, Organism=Drosophila melanogaster, GI24646562, Length=138, Percent_Identity=38.4057971014493, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI24646560, Length=138, Percent_Identity=38.4057971014493, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI24646558, Length=138, Percent_Identity=38.4057971014493, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI24646556, Length=138, Percent_Identity=38.4057971014493, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI21357547, Length=138, Percent_Identity=38.4057971014493, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI21358273, Length=68, Percent_Identity=52.9411764705882, Blast_Score=72, Evalue=4e-13, Organism=Drosophila melanogaster, GI21357687, Length=64, Percent_Identity=53.125, Blast_Score=69, Evalue=4e-12, Organism=Drosophila melanogaster, GI24651436, Length=66, Percent_Identity=43.9393939393939, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI24651439, Length=66, Percent_Identity=43.9393939393939, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI21358311, Length=66, Percent_Identity=43.9393939393939, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI24762799, Length=67, Percent_Identity=50.7462686567164, Blast_Score=65, Evalue=6e-11, Organism=Drosophila melanogaster, GI21355911, Length=83, Percent_Identity=44.578313253012, Blast_Score=64, Evalue=8e-11, Organism=Drosophila melanogaster, GI18859921, Length=64, Percent_Identity=50, Blast_Score=64, Evalue=1e-10,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012724 - InterPro: IPR002939 - InterPro: IPR001623 - InterPro: IPR018253 - InterPro: IPR008971 - InterPro: IPR015609 - InterPro: IPR003095 - InterPro: IPR001305 [H]
Pfam domain/function: PF00226 DnaJ; PF01556 DnaJ_C; PF00684 DnaJ_CXXCXGXG [H]
EC number: NA
Molecular weight: Translated: 32401; Mature: 32401
Theoretical pI: Translated: 9.33; Mature: 9.33
Prosite motif: PS00636 DNAJ_1 ; PS50076 DNAJ_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKDYYQVLGVSRTASDEEIKQAYRRLARKYHPDVNPGDPKAEARFKEINEAYQVLSDKEQ CCCHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCHHH RAKYDRFGSDFRRYEQTGFGGFDYGSQDFADLFETLFGQRRTTGGGFNVRLDGQDVEQPV HHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCHH ELTLEEAYNGTQRTVQFSNPNGTPRTITVKIPAGIDTGKRVRVPGEGAPGLNGGRRGDLY HHHHHHHCCCCEEEEEECCCCCCCEEEEEEECCCCCCCCEEECCCCCCCCCCCCCCCCEE LVVTVKPHERFERKGNDLHTTIPVSMYTLLLGGQTQIPLLSGKTLTLNIPPQTQNGRVFR EEEEECCHHHHHHCCCCEEEEEHHHHHHHHCCCCCCCEEECCCEEEEECCCCCCCCEEEE IAGQGMPLMHSHQHGDLYVTVSAVLPTNLSPQARKLVEELQQLTEGDRR EECCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MKDYYQVLGVSRTASDEEIKQAYRRLARKYHPDVNPGDPKAEARFKEINEAYQVLSDKEQ CCCHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCHHH RAKYDRFGSDFRRYEQTGFGGFDYGSQDFADLFETLFGQRRTTGGGFNVRLDGQDVEQPV HHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCHH ELTLEEAYNGTQRTVQFSNPNGTPRTITVKIPAGIDTGKRVRVPGEGAPGLNGGRRGDLY HHHHHHHCCCCEEEEEECCCCCCCEEEEEEECCCCCCCCEEECCCCCCCCCCCCCCCCEE LVVTVKPHERFERKGNDLHTTIPVSMYTLLLGGQTQIPLLSGKTLTLNIPPQTQNGRVFR EEEEECCHHHHHHCCCCEEEEEHHHHHHHHCCCCCCCEEECCCEEEEECCCCCCCCEEEE IAGQGMPLMHSHQHGDLYVTVSAVLPTNLSPQARKLVEELQQLTEGDRR EECCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA