| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222526710
Identifier: 222526710
GI number: 222526710
Start: 4341003
End: 4341365
Strand: Reverse
Name: 222526710
Synonym: Chy400_3481
Alternate gene names: NA
Gene position: 4341365-4341003 (Counterclockwise)
Preceding gene: 222526711
Following gene: 222526709
Centisome position: 82.4
GC content: 54.82
Gene sequence:
>363_bases ATGCCATCCAATACGCCGAAGCCATCCTCACATTCTGTCGTCATCAAATCAGTTGATCGCGCTCGTATCGAGCAGGCGGT TGAGCAGTATATCGCCAGACTGCGTTCAGAACACCCGCAAATTGAGCGTGTGATCTGGTTTGGTTCATGGGTGAACGGTT TGCCGTCACCGGGTAGTGATGTTGATCTCTGCCTGATCGTCTCTGCCACAGACAAGCCGCCGCGCGAGCGAGTCGCTGAC TTTTTGCCGGTTGGATTTCCGGTCGGCATTGATCTGTTCGTTTACACTCGCGAAGAATTCGCGCGGTTGCAGGAAGTACA CCCTGGCTGGCATGCGAGCATTATTGCCGGTCGCGAGCTGTGA
Upstream 100 bases:
>100_bases TACGCACGTATACTTGACAAGCATTATATTCCTACCCGCTACCCAAACGGTTTCGATTCGGGAGCACCTACCGATTTCTA CACTGCAACAGAGGCACACC
Downstream 100 bases:
>100_bases AGATTGCCGGTGATCAGTCCCAAACACATAACCCACTCCGCCATGAAGCCGACCTGCCACGGCAAGCGTGGTACAATGAA ACCCAAGAGTATACGAACCA
Product: DNA polymerase, beta domain-containing protein region
Products: NA
Alternate protein names: DNA Polymerase Beta Domain Protein Region
Number of amino acids: Translated: 120; Mature: 119
Protein sequence:
>120_residues MPSNTPKPSSHSVVIKSVDRARIEQAVEQYIARLRSEHPQIERVIWFGSWVNGLPSPGSDVDLCLIVSATDKPPRERVAD FLPVGFPVGIDLFVYTREEFARLQEVHPGWHASIIAGREL
Sequences:
>Translated_120_residues MPSNTPKPSSHSVVIKSVDRARIEQAVEQYIARLRSEHPQIERVIWFGSWVNGLPSPGSDVDLCLIVSATDKPPRERVAD FLPVGFPVGIDLFVYTREEFARLQEVHPGWHASIIAGREL >Mature_119_residues PSNTPKPSSHSVVIKSVDRARIEQAVEQYIARLRSEHPQIERVIWFGSWVNGLPSPGSDVDLCLIVSATDKPPRERVADF LPVGFPVGIDLFVYTREEFARLQEVHPGWHASIIAGREL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13471; Mature: 13340
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSNTPKPSSHSVVIKSVDRARIEQAVEQYIARLRSEHPQIERVIWFGSWVNGLPSPGSD CCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCHHCCCCCCCCC VDLCLIVSATDKPPRERVADFLPVGFPVGIDLFVYTREEFARLQEVHPGWHASIIAGREL CEEEEEEECCCCCHHHHHHHHCCCCCCCCEEEEEEEHHHHHHHHHCCCCCCEEEECCCCC >Mature Secondary Structure PSNTPKPSSHSVVIKSVDRARIEQAVEQYIARLRSEHPQIERVIWFGSWVNGLPSPGSD CCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCHHCCCCCCCCC VDLCLIVSATDKPPRERVADFLPVGFPVGIDLFVYTREEFARLQEVHPGWHASIIAGREL CEEEEEEECCCCCHHHHHHHHCCCCCCCCEEEEEEEHHHHHHHHHCCCCCCEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA