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The map label for this gene is nudF [H]

Identifier: 222526680

GI number: 222526680

Start: 4302026

End: 4302754

Strand: Reverse

Name: nudF [H]

Synonym: Chy400_3450

Alternate gene names: 222526680

Gene position: 4302754-4302026 (Counterclockwise)

Preceding gene: 222526681

Following gene: 222526679

Centisome position: 81.66

GC content: 56.1

Gene sequence:

>729_bases
ATGCAGGATGAACGCCCGGTACCTTACGACATCAGCAAATATCAACTGCCGGCTGTCACGGTCGATGTGGTCATCTTCAG
CCTGATCAATCGTACCCTGCACGTCTTACTGGTACAGCGCAAGCGCTGGCCATTTGAAGGACGCTGGGCGATACCGGGCG
GTTTCATCCGGCTTGACGAATCGCTTGAAGAGGCTGCACGTCGTGAACTCGAAGAGGAGACTGGGGTACGAGATGTGTAC
CTTGAGCAGCTCTACACCTTCGGCGATGTTCAGCGCGATCCGCGTCACCGTGTGATCAGTGTGGCCTACATTGCACTGGT
ACGCGCTGATGCACAGACGATCCGGGTGAGCGCTGAGAACAGCGATGTGCGCTGGTTCCCGGTTGACCACCTGCCCACGC
CGTTGGCCTTCGATCACGATCAGATTCTGGCCTATGCCCTCTCGCGATTGCGCTCGAAGCTTGAGTATACGACGCTGGCG
TTTCAGTTGCTACCTGAACTCTTCTCGATCCTCGAATTGAAACACATTTACGAGCAGATTTTGGGGGAAAAGCTCGACAA
GGGCAATTTCTACCGCAAGATCAAAGAGGCCGGTATTCTGGAAGAGACACCCTATATGCGTGAAGGCCGTGGGCGACCAA
CCCGCCTCTGGCGGTTTCGCCGTGATCGATCCGGCGATAAGCAATTTGTCTTCCGCTGGCGCGAGGATCGCCGTGAAGGG
GTGAGTTGA

Upstream 100 bases:

>100_bases
AGCCGGTCTCCTCGGCGCGGCAGCAGCAGCAATGAGTTGACACCGTTAGTATTTTAGTGTATAAATAACACTAAATCACA
ACGGAGGGAGATAATCGATC

Downstream 100 bases:

>100_bases
CCGACCCCAAGATCAGCTTCTCTAATGTTTCTGCAAGCGTTTGTCATCAGAATCGATAGGGTAGAACCCTGTTCTCGCTT
CGTGCACCCCCGTGCGGGAC

Product: NUDIX hydrolase

Products: NA

Alternate protein names: ADP-ribose diphosphatase; ADP-ribose phosphohydrolase; Adenosine diphosphoribose pyrophosphatase; ADPR-PPase [H]

Number of amino acids: Translated: 242; Mature: 242

Protein sequence:

>242_residues
MQDERPVPYDISKYQLPAVTVDVVIFSLINRTLHVLLVQRKRWPFEGRWAIPGGFIRLDESLEEAARRELEEETGVRDVY
LEQLYTFGDVQRDPRHRVISVAYIALVRADAQTIRVSAENSDVRWFPVDHLPTPLAFDHDQILAYALSRLRSKLEYTTLA
FQLLPELFSILELKHIYEQILGEKLDKGNFYRKIKEAGILEETPYMREGRGRPTRLWRFRRDRSGDKQFVFRWREDRREG
VS

Sequences:

>Translated_242_residues
MQDERPVPYDISKYQLPAVTVDVVIFSLINRTLHVLLVQRKRWPFEGRWAIPGGFIRLDESLEEAARRELEEETGVRDVY
LEQLYTFGDVQRDPRHRVISVAYIALVRADAQTIRVSAENSDVRWFPVDHLPTPLAFDHDQILAYALSRLRSKLEYTTLA
FQLLPELFSILELKHIYEQILGEKLDKGNFYRKIKEAGILEETPYMREGRGRPTRLWRFRRDRSGDKQFVFRWREDRREG
VS
>Mature_242_residues
MQDERPVPYDISKYQLPAVTVDVVIFSLINRTLHVLLVQRKRWPFEGRWAIPGGFIRLDESLEEAARRELEEETGVRDVY
LEQLYTFGDVQRDPRHRVISVAYIALVRADAQTIRVSAENSDVRWFPVDHLPTPLAFDHDQILAYALSRLRSKLEYTTLA
FQLLPELFSILELKHIYEQILGEKLDKGNFYRKIKEAGILEETPYMREGRGRPTRLWRFRRDRSGDKQFVFRWREDRREG
VS

Specific function: Unknown

COG id: COG1051

COG function: function code F; ADP-ribose pyrophosphatase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020476
- InterPro:   IPR020084
- InterPro:   IPR000086
- InterPro:   IPR015797 [H]

Pfam domain/function: PF00293 NUDIX [H]

EC number: =3.6.1.13 [H]

Molecular weight: Translated: 28678; Mature: 28678

Theoretical pI: Translated: 8.71; Mature: 8.71

Prosite motif: PS00893 NUDIX

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQDERPVPYDISKYQLPAVTVDVVIFSLINRTLHVLLVQRKRWPFEGRWAIPGGFIRLDE
CCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCEEEEHH
SLEEAARRELEEETGVRDVYLEQLYTFGDVQRDPRHRVISVAYIALVRADAQTIRVSAEN
HHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCC
SDVRWFPVDHLPTPLAFDHDQILAYALSRLRSKLEYTTLAFQLLPELFSILELKHIYEQI
CCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGEKLDKGNFYRKIKEAGILEETPYMREGRGRPTRLWRFRRDRSGDKQFVFRWREDRREG
HHHHCCCCHHHHHHHHCCCCCCCCCHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCC
VS
CC
>Mature Secondary Structure
MQDERPVPYDISKYQLPAVTVDVVIFSLINRTLHVLLVQRKRWPFEGRWAIPGGFIRLDE
CCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCEEEEHH
SLEEAARRELEEETGVRDVYLEQLYTFGDVQRDPRHRVISVAYIALVRADAQTIRVSAEN
HHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCC
SDVRWFPVDHLPTPLAFDHDQILAYALSRLRSKLEYTTLAFQLLPELFSILELKHIYEQI
CCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGEKLDKGNFYRKIKEAGILEETPYMREGRGRPTRLWRFRRDRSGDKQFVFRWREDRREG
HHHHCCCCHHHHHHHHCCCCCCCCCHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCC
VS
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087; 9694840 [H]