| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
Click here to switch to the map view.
The map label for this gene is yfeW [H]
Identifier: 222526676
GI number: 222526676
Start: 4297792
End: 4298841
Strand: Direct
Name: yfeW [H]
Synonym: Chy400_3446
Alternate gene names: 222526676
Gene position: 4297792-4298841 (Clockwise)
Preceding gene: 222526675
Following gene: 222526677
Centisome position: 81.57
GC content: 62.1
Gene sequence:
>1050_bases ATGATACCTGAGATTGATCACATCATCACCACCGCGATTCACGAGCGTATCTTTCCAGGCGCCATTGTCCTGGTGGCGCA GGACACCCACATCCTGCATGCGGCTGCTTATGGCACCACGATGTACGATGACCCCGGCACCATGCCGGTCACGCTCGATA CCATCTACGATCTGGCGTCGTTAACCAAAGTCTTCACCGCCACCGCCGCACTCCGCCTGCACGACGCCGGCATGCTACCA CTCGACCAACCCATCCAGCACTGGCTACCGGCACTGCATGCACCCGACATCACCGTTCGCCATCTCCTGAGTCACTCCAG TGGTCTGACCGTCCAACTGGCGCCCTTAGCCCGCGCCGGCGCCGCAACGATCAGAACAATGGTCTACACAGCCACTCCCC GCCATCCACCCGGTCGCATCGTTGAGTATGCCAACCTCAACACCCTGTTGTTGGGTGATGTCGTGACCGCGATCTACGGT GGTTCACTGGCCGACGCCCTGACCGAACTGGTCTGTGTACCGCTCGGCCTGCACAAGACGCGCTTCAACCCACCGACGGA GTGGCGGGCAACCATTGCCCCCACCGAATGGGACTGGGAATGGCGTGGTGGCCTTGTACACGGCGTGGTGCATGACGAAA GCACGTATGCGCTGGGCGGCGTTGCCGGTCATGCCGGCCTCTTCGGCCCGGCGGCTGAAGCATTGCGGCTGGTACAGCTC TTCATCCAGGAAGGAGCCTGGCAAGACCGCCAGCTCCTGCGGGCCGGCACAGCACTGGCTGCACTAACCCCACAACCGGC CTCCGACACCAGCCGATTGGTGAGTGGCCTGGGCTGGATGCTACACCGCCCATACATGGGGAGCGCCATCCACCACGGCT TCGGCCATAGTGGCTTCACCGGCCCCCTCCTGATCGGCATTCCCCAGCGGAGACTGGCAATCGTCCTGCTGTGCAACCGC ACCTACCCCAAACGAACACCGCCGCCGTACCGTCACCATGCGATTGCTGCTATGGTTGTAGACGCAATCATCCAGGCGAT AGATCGTTAG
Upstream 100 bases:
>100_bases GTATCGGCTTGAGCCGCACCGATTCCTTCACCTCACAACAGGCGTATACTTTCAGGAAAGCGTCAGCAGATAAGGGAGCA ACCTTCGTACCCACAACGAT
Downstream 100 bases:
>100_bases CGCTCTTGCCAGCCAGATTGCCATAAGTACGGGTATAATGATAGAGAGCGATAAAACCGTTTGATTCAACCTCTTCCAGG AGAGTGATATGAGTCGCAAA
Product: beta-lactamase
Products: substituted beta-amino acid
Alternate protein names: NA
Number of amino acids: Translated: 349; Mature: 349
Protein sequence:
>349_residues MIPEIDHIITTAIHERIFPGAIVLVAQDTHILHAAAYGTTMYDDPGTMPVTLDTIYDLASLTKVFTATAALRLHDAGMLP LDQPIQHWLPALHAPDITVRHLLSHSSGLTVQLAPLARAGAATIRTMVYTATPRHPPGRIVEYANLNTLLLGDVVTAIYG GSLADALTELVCVPLGLHKTRFNPPTEWRATIAPTEWDWEWRGGLVHGVVHDESTYALGGVAGHAGLFGPAAEALRLVQL FIQEGAWQDRQLLRAGTALAALTPQPASDTSRLVSGLGWMLHRPYMGSAIHHGFGHSGFTGPLLIGIPQRRLAIVLLCNR TYPKRTPPPYRHHAIAAMVVDAIIQAIDR
Sequences:
>Translated_349_residues MIPEIDHIITTAIHERIFPGAIVLVAQDTHILHAAAYGTTMYDDPGTMPVTLDTIYDLASLTKVFTATAALRLHDAGMLP LDQPIQHWLPALHAPDITVRHLLSHSSGLTVQLAPLARAGAATIRTMVYTATPRHPPGRIVEYANLNTLLLGDVVTAIYG GSLADALTELVCVPLGLHKTRFNPPTEWRATIAPTEWDWEWRGGLVHGVVHDESTYALGGVAGHAGLFGPAAEALRLVQL FIQEGAWQDRQLLRAGTALAALTPQPASDTSRLVSGLGWMLHRPYMGSAIHHGFGHSGFTGPLLIGIPQRRLAIVLLCNR TYPKRTPPPYRHHAIAAMVVDAIIQAIDR >Mature_349_residues MIPEIDHIITTAIHERIFPGAIVLVAQDTHILHAAAYGTTMYDDPGTMPVTLDTIYDLASLTKVFTATAALRLHDAGMLP LDQPIQHWLPALHAPDITVRHLLSHSSGLTVQLAPLARAGAATIRTMVYTATPRHPPGRIVEYANLNTLLLGDVVTAIYG GSLADALTELVCVPLGLHKTRFNPPTEWRATIAPTEWDWEWRGGLVHGVVHDESTYALGGVAGHAGLFGPAAEALRLVQL FIQEGAWQDRQLLRAGTALAALTPQPASDTSRLVSGLGWMLHRPYMGSAIHHGFGHSGFTGPLLIGIPQRRLAIVLLCNR TYPKRTPPPYRHHAIAAMVVDAIIQAIDR
Specific function: Unknown
COG id: COG1680
COG function: function code V; Beta-lactamase class C and other penicillin binding proteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0214 family [H]
Homologues:
Organism=Escherichia coli, GI87082101, Length=383, Percent_Identity=30.0261096605744, Blast_Score=121, Evalue=8e-29, Organism=Escherichia coli, GI1786574, Length=351, Percent_Identity=24.2165242165242, Blast_Score=62, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012338 - InterPro: IPR001466 - InterPro: IPR022849 [H]
Pfam domain/function: PF00144 Beta-lactamase [H]
EC number: 3.5.2.6
Molecular weight: Translated: 37823; Mature: 37823
Theoretical pI: Translated: 7.23; Mature: 7.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIPEIDHIITTAIHERIFPGAIVLVAQDTHILHAAAYGTTMYDDPGTMPVTLDTIYDLAS CCCCHHHHHHHHHHHHCCCCEEEEEECCCEEEEEECCCCEEECCCCCCEEEHHHHHHHHH LTKVFTATAALRLHDAGMLPLDQPIQHWLPALHAPDITVRHLLSHSSGLTVQLAPLARAG HHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCEEEECCCHHCC AATIRTMVYTATPRHPPGRIVEYANLNTLLLGDVVTAIYGGSLADALTELVCVPLGLHKT HHHHHEEEEECCCCCCCCCEEEECCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHC RFNPPTEWRATIAPTEWDWEWRGGLVHGVVHDESTYALGGVAGHAGLFGPAAEALRLVQL CCCCCCCCEEEECCCCCCCCCCCCEEEEEEECCCCEEECCCCCCCCCCCHHHHHHHHHHH FIQEGAWQDRQLLRAGTALAALTPQPASDTSRLVSGLGWMLHRPYMGSAIHHGFGHSGFT HHHHCCCHHHHHHHHCCHHEEECCCCCCHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCC GPLLIGIPQRRLAIVLLCNRTYPKRTPPPYRHHAIAAMVVDAIIQAIDR CCEEEECCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MIPEIDHIITTAIHERIFPGAIVLVAQDTHILHAAAYGTTMYDDPGTMPVTLDTIYDLAS CCCCHHHHHHHHHHHHCCCCEEEEEECCCEEEEEECCCCEEECCCCCCEEEHHHHHHHHH LTKVFTATAALRLHDAGMLPLDQPIQHWLPALHAPDITVRHLLSHSSGLTVQLAPLARAG HHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCEEEECCCHHCC AATIRTMVYTATPRHPPGRIVEYANLNTLLLGDVVTAIYGGSLADALTELVCVPLGLHKT HHHHHEEEEECCCCCCCCCEEEECCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHC RFNPPTEWRATIAPTEWDWEWRGGLVHGVVHDESTYALGGVAGHAGLFGPAAEALRLVQL CCCCCCCCEEEECCCCCCCCCCCCEEEEEEECCCCEEECCCCCCCCCCCHHHHHHHHHHH FIQEGAWQDRQLLRAGTALAALTPQPASDTSRLVSGLGWMLHRPYMGSAIHHGFGHSGFT HHHHCCCHHHHHHHHCCHHEEECCCCCCHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCC GPLLIGIPQRRLAIVLLCNRTYPKRTPPPYRHHAIAAMVVDAIIQAIDR CCEEEECCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: beta-lactam; H2O
Specific reaction: A beta-lactam + H2O = a substituted beta-amino acid
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]