| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222526633
Identifier: 222526633
GI number: 222526633
Start: 4230219
End: 4232351
Strand: Reverse
Name: 222526633
Synonym: Chy400_3401
Alternate gene names: NA
Gene position: 4232351-4230219 (Counterclockwise)
Preceding gene: 222526635
Following gene: 222526627
Centisome position: 80.33
GC content: 55.88
Gene sequence:
>2133_bases ATGAGACTCAGGGTGCGCGCACAGGTATGGTTCACGCTGTTCATAATGAGTGCGCTGTGTCTGGCACTCTGGCCAGCAAC TCCGGCACCGGCTCAGACCACGACATTCCTACCAGTCTTTCGCTTAACAAAATTACTCGTGAGCAATGACACCACCCAAC AGTTAGGTGGCTTACTCGAAGGGATTGGTCGTACCGCAACCGCGGGTCAGGATGAATTCCGTGGCAAGAACCGCCTCTTT CGTTTGAACGAACAAAACCGCACGGTGCTGACTCAATATGAGGCATCAGGCGGTTTTTTCGCGTATGACATTGATGGTTT GGGACGTGAAACGCCGACTGGTGCAGTAGATGAAGAGGAAGCCAAACGCCTGGCCTGTCTCTTTCTCAGGAATAACGATC TGGTCAGCCACGACGGCACACTGATTGGAAACAGCCAGAGTAACTATCCGGTACGTCTGCCCACAATACCAGGCACGTGT AGTGACCCGAAAGACTTTGGCCGCACTATCCTCATCCGGGCAGCGCAGGTACCGGTCAGCGGTGCCGGCCTGGGCCAGGT TACTGAGTCGGTGGTTGGTGTGGTGGTTGAAGTACCGTTTGGTTTTGTCAATGGTCAGCAGTTCATCCCTATCGGTGGCG CGGGCGGCCATCTATCGCTCCTGTTTACGACAACCGACACGCTGCTTACTCAACAGGGAGGTGGAGACTCACTGGATAGT TCAGTCCCCGGTTTAGCGGCGATTGCCATGCCCTTCCATGGCAGGAGTCTTGATTTTGTAGCAGAGGTACCGGTGCGGAG CTTCGACCAGGTGCGCAACGAGGTGCAGCAGACCGTCGAGCGATCATACCCCGGCGCAACGGTGAATGTGCCCAATCCGG TATTGAGTTATCAGGTTGACGATTTCGCCGTTGAGCAGTCTATTATCGAACCAGAGGCTGTATTTGACAATATCACGGTC ACGCTACCGGGTGGCGAGGAGATTGTGCTCCGCTCGTTCTCAGTACCTCTGGCAGCAGGTGGATCGGGAGGGTTTGCACC GACGGTCAACATTACCTCACCCACCAATGGCAGCACATTTCAGCCGGGTAGTGCAGTAACCTTCAACGGCACCATCGCCG ATGGCACCGCTCCGTATACCTATCAGTGGTTCCTCGGCGATGAGACACCGCTGAGCAATCCGGCCACCCGCAACACTCCC GGCACAGTAACGTTAACGACAACCCTACCGGCGAGTCTGCGCGAGACGACACCAGACGCTCAAACCGTCATCTTGCGGGT GACCGACGACAATGGCGTGCAACGTGACGCGAGCATTAGCCTGACTCCCGATTTTCGGTTTCTTTATATTCCGGTGATCA TTCGCGCGGGTACCAGTTCCAGTGCGATACCGCAGATCGAACTCAGTCAAGCCAGCTACACCTTCGGGATCGAAGGCAAC TGGGACTATCCACCAGCCGGGACGGGAGGATCGGATCTGCCCGGTGTGATACCCGATGTCAATGGGTTACGGTTCGGTAT GCTGAGTTACGGCTATACCCAGCGCTTCTTCTGGTCAAATTCGGCAGCCTGGGAGCGCGACTGGCGTGATTGCAGTCTGG GTGGGATTGATTGTACATTCGGTGTTGATCGGGCGGCCTTCGTATACTACGCCGGCCACGGTGGACCAGGTGGCATCTCA ATGGCGTCAAACAAGGATAGCACCTGGTTTGATGGCACGAACGCCCGTTATCAATCTCTGCGCTGGGTCGGCTTCGCCTC GTGTCAGACGCTGCGGGTACAGGGATATGCAGCCGGTAGTGAGCCTATCCGACGCTGGTTTAACGCCTTTCAGGGTGCCC ATATGCTGCTCGGCTTCAACAGCAACATGGCCGACGTCGCATTCGGTGGTCAGTTGATGAACAACATGCGGATGCCATCC TTCCTGGGGATTGATTTTCCGTGGGCACAACTTACGATTGCACAGGCGTGGGTGAAGACCGCCTTTGATATGAATGCCGG CAAGCCAGCCTATATCTACGCCCGTAGCACAACGGTGAACCCAATTAACGACAAACTGCCCAAGCCGGGTGGGGACTTCC CATCACGACCGTTCCCGGTGACATCATACAATTGGGTGTGGTGGGAGTTTTAG
Upstream 100 bases:
>100_bases ACGTTTAAGATCATAAAAGCCTGAAATGTCTAACCTTAAACTCTTTCTCGTCCTCATTTCAGGCGGATTGTTTCCGCGAG TATGGAGTGAGGAGGAGACC
Downstream 100 bases:
>100_bases GAGGAAAAGGCTACAGGGGGTAGATATCCAATCTACCCCCGTAATAACCCAAGTCGCTACCTTTATCACCGCAGAGACAC AGAGGACACAGAGGATGGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 710; Mature: 710
Protein sequence:
>710_residues MRLRVRAQVWFTLFIMSALCLALWPATPAPAQTTTFLPVFRLTKLLVSNDTTQQLGGLLEGIGRTATAGQDEFRGKNRLF RLNEQNRTVLTQYEASGGFFAYDIDGLGRETPTGAVDEEEAKRLACLFLRNNDLVSHDGTLIGNSQSNYPVRLPTIPGTC SDPKDFGRTILIRAAQVPVSGAGLGQVTESVVGVVVEVPFGFVNGQQFIPIGGAGGHLSLLFTTTDTLLTQQGGGDSLDS SVPGLAAIAMPFHGRSLDFVAEVPVRSFDQVRNEVQQTVERSYPGATVNVPNPVLSYQVDDFAVEQSIIEPEAVFDNITV TLPGGEEIVLRSFSVPLAAGGSGGFAPTVNITSPTNGSTFQPGSAVTFNGTIADGTAPYTYQWFLGDETPLSNPATRNTP GTVTLTTTLPASLRETTPDAQTVILRVTDDNGVQRDASISLTPDFRFLYIPVIIRAGTSSSAIPQIELSQASYTFGIEGN WDYPPAGTGGSDLPGVIPDVNGLRFGMLSYGYTQRFFWSNSAAWERDWRDCSLGGIDCTFGVDRAAFVYYAGHGGPGGIS MASNKDSTWFDGTNARYQSLRWVGFASCQTLRVQGYAAGSEPIRRWFNAFQGAHMLLGFNSNMADVAFGGQLMNNMRMPS FLGIDFPWAQLTIAQAWVKTAFDMNAGKPAYIYARSTTVNPINDKLPKPGGDFPSRPFPVTSYNWVWWEF
Sequences:
>Translated_710_residues MRLRVRAQVWFTLFIMSALCLALWPATPAPAQTTTFLPVFRLTKLLVSNDTTQQLGGLLEGIGRTATAGQDEFRGKNRLF RLNEQNRTVLTQYEASGGFFAYDIDGLGRETPTGAVDEEEAKRLACLFLRNNDLVSHDGTLIGNSQSNYPVRLPTIPGTC SDPKDFGRTILIRAAQVPVSGAGLGQVTESVVGVVVEVPFGFVNGQQFIPIGGAGGHLSLLFTTTDTLLTQQGGGDSLDS SVPGLAAIAMPFHGRSLDFVAEVPVRSFDQVRNEVQQTVERSYPGATVNVPNPVLSYQVDDFAVEQSIIEPEAVFDNITV TLPGGEEIVLRSFSVPLAAGGSGGFAPTVNITSPTNGSTFQPGSAVTFNGTIADGTAPYTYQWFLGDETPLSNPATRNTP GTVTLTTTLPASLRETTPDAQTVILRVTDDNGVQRDASISLTPDFRFLYIPVIIRAGTSSSAIPQIELSQASYTFGIEGN WDYPPAGTGGSDLPGVIPDVNGLRFGMLSYGYTQRFFWSNSAAWERDWRDCSLGGIDCTFGVDRAAFVYYAGHGGPGGIS MASNKDSTWFDGTNARYQSLRWVGFASCQTLRVQGYAAGSEPIRRWFNAFQGAHMLLGFNSNMADVAFGGQLMNNMRMPS FLGIDFPWAQLTIAQAWVKTAFDMNAGKPAYIYARSTTVNPINDKLPKPGGDFPSRPFPVTSYNWVWWEF >Mature_710_residues MRLRVRAQVWFTLFIMSALCLALWPATPAPAQTTTFLPVFRLTKLLVSNDTTQQLGGLLEGIGRTATAGQDEFRGKNRLF RLNEQNRTVLTQYEASGGFFAYDIDGLGRETPTGAVDEEEAKRLACLFLRNNDLVSHDGTLIGNSQSNYPVRLPTIPGTC SDPKDFGRTILIRAAQVPVSGAGLGQVTESVVGVVVEVPFGFVNGQQFIPIGGAGGHLSLLFTTTDTLLTQQGGGDSLDS SVPGLAAIAMPFHGRSLDFVAEVPVRSFDQVRNEVQQTVERSYPGATVNVPNPVLSYQVDDFAVEQSIIEPEAVFDNITV TLPGGEEIVLRSFSVPLAAGGSGGFAPTVNITSPTNGSTFQPGSAVTFNGTIADGTAPYTYQWFLGDETPLSNPATRNTP GTVTLTTTLPASLRETTPDAQTVILRVTDDNGVQRDASISLTPDFRFLYIPVIIRAGTSSSAIPQIELSQASYTFGIEGN WDYPPAGTGGSDLPGVIPDVNGLRFGMLSYGYTQRFFWSNSAAWERDWRDCSLGGIDCTFGVDRAAFVYYAGHGGPGGIS MASNKDSTWFDGTNARYQSLRWVGFASCQTLRVQGYAAGSEPIRRWFNAFQGAHMLLGFNSNMADVAFGGQLMNNMRMPS FLGIDFPWAQLTIAQAWVKTAFDMNAGKPAYIYARSTTVNPINDKLPKPGGDFPSRPFPVTSYNWVWWEF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 76814; Mature: 76814
Theoretical pI: Translated: 4.71; Mature: 4.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLRVRAQVWFTLFIMSALCLALWPATPAPAQTTTFLPVFRLTKLLVSNDTTQQLGGLLE CEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEHHHHHHHHHHHCCCCHHHHHHHHH GIGRTATAGQDEFRGKNRLFRLNEQNRTVLTQYEASGGFFAYDIDGLGRETPTGAVDEEE HCCCCCCCCCHHHCCCCCEEEECCCCCEEEEEEECCCCEEEEECCCCCCCCCCCCCCHHH AKRLACLFLRNNDLVSHDGTLIGNSQSNYPVRLPTIPGTCSDPKDFGRTILIRAAQVPVS HCEEEEEEEECCCEECCCCEEEECCCCCCCEECCCCCCCCCCHHHHCCEEEEEEEECCCC GAGLGQVTESVVGVVVEVPFGFVNGQQFIPIGGAGGHLSLLFTTTDTLLTQQGGGDSLDS CCCHHHHHHHHHEEEEEECCCEECCCEEEEECCCCCEEEEEEEECCHHEEECCCCCCCCC SVPGLAAIAMPFHGRSLDFVAEVPVRSFDQVRNEVQQTVERSYPGATVNVPNPVLSYQVD CCCCEEEEEECCCCCCCCEEECCCHHHHHHHHHHHHHHHHHCCCCCEEECCCCEEEEEEC DFAVEQSIIEPEAVFDNITVTLPGGEEIVLRSFSVPLAAGGSGGFAPTVNITSPTNGSTF HHHHHHHHCCCHHHHCCEEEEECCCCEEEEEEECCCEEECCCCCCCEEEEECCCCCCCCC QPGSAVTFNGTIADGTAPYTYQWFLGDETPLSNPATRNTPGTVTLTTTLPASLRETTPDA CCCCEEEECCEECCCCCCEEEEEEECCCCCCCCCCCCCCCCEEEEEEECCCHHHHCCCCC QTVILRVTDDNGVQRDASISLTPDFRFLYIPVIIRAGTSSSAIPQIELSQASYTFGIEGN EEEEEEEECCCCCCCCCEEEECCCCEEEEEEEEEECCCCCCCCCEEEECCCEEEEECCCC WDYPPAGTGGSDLPGVIPDVNGLRFGMLSYGYTQRFFWSNSAAWERDWRDCSLGGIDCTF CCCCCCCCCCCCCCCCCCCCCCCEEEHHHCCCEEEEEECCCCCCCCCCCCCCCCCEEEEC GVDRAAFVYYAGHGGPGGISMASNKDSTWFDGTNARYQSLRWVGFASCQTLRVQGYAAGS CCCCEEEEEECCCCCCCCCEECCCCCCCEECCCCCHHHEEEEEEECCEEEEEEEEEECCC EPIRRWFNAFQGAHMLLGFNSNMADVAFGGQLMNNMRMPSFLGIDFPWAQLTIAQAWVKT HHHHHHHHHHCCCEEEEEECCCCCCEEECHHHHHCCCCCCEECCCCCHHHHHHHHHHHHH AFDMNAGKPAYIYARSTTVNPINDKLPKPGGDFPSRPFPVTSYNWVWWEF HHCCCCCCCEEEEEECCCCCCCHHCCCCCCCCCCCCCCCCCCCCEEEEEC >Mature Secondary Structure MRLRVRAQVWFTLFIMSALCLALWPATPAPAQTTTFLPVFRLTKLLVSNDTTQQLGGLLE CEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEHHHHHHHHHHHCCCCHHHHHHHHH GIGRTATAGQDEFRGKNRLFRLNEQNRTVLTQYEASGGFFAYDIDGLGRETPTGAVDEEE HCCCCCCCCCHHHCCCCCEEEECCCCCEEEEEEECCCCEEEEECCCCCCCCCCCCCCHHH AKRLACLFLRNNDLVSHDGTLIGNSQSNYPVRLPTIPGTCSDPKDFGRTILIRAAQVPVS HCEEEEEEEECCCEECCCCEEEECCCCCCCEECCCCCCCCCCHHHHCCEEEEEEEECCCC GAGLGQVTESVVGVVVEVPFGFVNGQQFIPIGGAGGHLSLLFTTTDTLLTQQGGGDSLDS CCCHHHHHHHHHEEEEEECCCEECCCEEEEECCCCCEEEEEEEECCHHEEECCCCCCCCC SVPGLAAIAMPFHGRSLDFVAEVPVRSFDQVRNEVQQTVERSYPGATVNVPNPVLSYQVD CCCCEEEEEECCCCCCCCEEECCCHHHHHHHHHHHHHHHHHCCCCCEEECCCCEEEEEEC DFAVEQSIIEPEAVFDNITVTLPGGEEIVLRSFSVPLAAGGSGGFAPTVNITSPTNGSTF HHHHHHHHCCCHHHHCCEEEEECCCCEEEEEEECCCEEECCCCCCCEEEEECCCCCCCCC QPGSAVTFNGTIADGTAPYTYQWFLGDETPLSNPATRNTPGTVTLTTTLPASLRETTPDA CCCCEEEECCEECCCCCCEEEEEEECCCCCCCCCCCCCCCCEEEEEEECCCHHHHCCCCC QTVILRVTDDNGVQRDASISLTPDFRFLYIPVIIRAGTSSSAIPQIELSQASYTFGIEGN EEEEEEEECCCCCCCCCEEEECCCCEEEEEEEEEECCCCCCCCCEEEECCCEEEEECCCC WDYPPAGTGGSDLPGVIPDVNGLRFGMLSYGYTQRFFWSNSAAWERDWRDCSLGGIDCTF CCCCCCCCCCCCCCCCCCCCCCCEEEHHHCCCEEEEEECCCCCCCCCCCCCCCCCEEEEC GVDRAAFVYYAGHGGPGGISMASNKDSTWFDGTNARYQSLRWVGFASCQTLRVQGYAAGS CCCCEEEEEECCCCCCCCCEECCCCCCCEECCCCCHHHEEEEEEECCEEEEEEEEEECCC EPIRRWFNAFQGAHMLLGFNSNMADVAFGGQLMNNMRMPSFLGIDFPWAQLTIAQAWVKT HHHHHHHHHHCCCEEEEEECCCCCCEEECHHHHHCCCCCCEECCCCCHHHHHHHHHHHHH AFDMNAGKPAYIYARSTTVNPINDKLPKPGGDFPSRPFPVTSYNWVWWEF HHCCCCCCCEEEEEECCCCCCCHHCCCCCCCCCCCCCCCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA