| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222526626
Identifier: 222526626
GI number: 222526626
Start: 4225371
End: 4226153
Strand: Reverse
Name: 222526626
Synonym: Chy400_3394
Alternate gene names: NA
Gene position: 4226153-4225371 (Counterclockwise)
Preceding gene: 222526627
Following gene: 222526623
Centisome position: 80.21
GC content: 55.81
Gene sequence:
>783_bases ATGAAACAACTTATCGTTTGGTTACTCGTGTTCGTGGTTGCGCTTTCCGCGTGTAGTTTCACCCCGCCTGGCGCGGTGAC CGGATCGGGAAACATGGTCACCCAAACCTTCGATGTACGCGATTTCGATCAGATCCGCCTTGGGACATCAGGCGTGATGT ACATCGAACAGGGCGACAACTTCAGCCTGAGCATCGAAGCCGATGACAACATCCTGCCCGTTTTGCAGGTGGAGGTGGAG AAGGGCGTGCTGACTCTGCGTACCACCCCCGAGGTCTCCATGCTGCAATTTGAGACGCTCATCTACCGCGTGACCCTGCC CAAATTGAGCGCCATTGACCTTTCTGGCTCGGCGGATATCCGCGTGGAGGATTTCACCGCAGACTCACTGGACATCAACA TCAACGGCTCTGGCGATGTGACCTTCGTCAACCTGGATGTGGCTTCACTCTCCGTCCGCATCAGCGGTTCGGGCGACATG ATCCTGCCCAACGTGGCGGCAAAGACTATCCTTGCCGAAGTCAACAGCTCGGGTTTGATGGAGGCGGCGGGTACAACCGA TAGACTACATGTAAAAGTATCTGGTTCTGGCGATCTGTTGGCAGAAAAACTCAAGGCATCCATCGTGGAGGTGGCGGTCA ATGGCAGCGGTGATGTTACGGTCTGGGCAGTGGACACGCTGGATGTGTCCATCAGCGGTAGCGGCAATGTGAGGTATCTC GGCTCGCCTACATTGACCAAGAAGATCAGCGGTGGCGGCGATCTGAGCAAACTGGACAGCTAA
Upstream 100 bases:
>100_bases TGATGGCACTGTACGGTGTCTATTTGCTGCGCGGTTACAGGGAAGATATCGATCCTAACCGCGTGAATCATTGCCATTAC AGGCAACAAGGAGAAACATC
Downstream 100 bases:
>100_bases AACTCGTGATAGGATTGACCTTTCAAATTGATGGAAGGTCAATCCCTGTTAGCAGAATTATCAATTCCAACGGAATAGAG TAAAACAAGAAAGAAAAATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 260; Mature: 260
Protein sequence:
>260_residues MKQLIVWLLVFVVALSACSFTPPGAVTGSGNMVTQTFDVRDFDQIRLGTSGVMYIEQGDNFSLSIEADDNILPVLQVEVE KGVLTLRTTPEVSMLQFETLIYRVTLPKLSAIDLSGSADIRVEDFTADSLDININGSGDVTFVNLDVASLSVRISGSGDM ILPNVAAKTILAEVNSSGLMEAAGTTDRLHVKVSGSGDLLAEKLKASIVEVAVNGSGDVTVWAVDTLDVSISGSGNVRYL GSPTLTKKISGGGDLSKLDS
Sequences:
>Translated_260_residues MKQLIVWLLVFVVALSACSFTPPGAVTGSGNMVTQTFDVRDFDQIRLGTSGVMYIEQGDNFSLSIEADDNILPVLQVEVE KGVLTLRTTPEVSMLQFETLIYRVTLPKLSAIDLSGSADIRVEDFTADSLDININGSGDVTFVNLDVASLSVRISGSGDM ILPNVAAKTILAEVNSSGLMEAAGTTDRLHVKVSGSGDLLAEKLKASIVEVAVNGSGDVTVWAVDTLDVSISGSGNVRYL GSPTLTKKISGGGDLSKLDS >Mature_260_residues MKQLIVWLLVFVVALSACSFTPPGAVTGSGNMVTQTFDVRDFDQIRLGTSGVMYIEQGDNFSLSIEADDNILPVLQVEVE KGVLTLRTTPEVSMLQFETLIYRVTLPKLSAIDLSGSADIRVEDFTADSLDININGSGDVTFVNLDVASLSVRISGSGDM ILPNVAAKTILAEVNSSGLMEAAGTTDRLHVKVSGSGDLLAEKLKASIVEVAVNGSGDVTVWAVDTLDVSISGSGNVRYL GSPTLTKKISGGGDLSKLDS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27345; Mature: 27345
Theoretical pI: Translated: 4.15; Mature: 4.15
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQLIVWLLVFVVALSACSFTPPGAVTGSGNMVTQTFDVRDFDQIRLGTSGVMYIEQGDN CHHHHHHHHHHHHHHHHCCCCCCCCEECCCCEEEEEECCCCCCCEEECCCEEEEEECCCC FSLSIEADDNILPVLQVEVEKGVLTLRTTPEVSMLQFETLIYRVTLPKLSAIDLSGSADI EEEEEECCCCEEEEEEEEEECCEEEEECCCCCHHEEEEEEEEEEECCCEEEEECCCCCCE RVEDFTADSLDININGSGDVTFVNLDVASLSVRISGSGDMILPNVAAKTILAEVNSSGLM EEEEEECCEEEEEECCCCCEEEEEEEEEEEEEEECCCCCEEECCHHHHHHEEECCCCCCE EAAGTTDRLHVKVSGSGDLLAEKLKASIVEVAVNGSGDVTVWAVDTLDVSISGSGNVRYL EECCCCEEEEEEECCCCHHHHHHHHCEEEEEEECCCCCEEEEEEEEEEEEEECCCCEEEE GSPTLTKKISGGGDLSKLDS CCCCEEEEECCCCCCHHCCC >Mature Secondary Structure MKQLIVWLLVFVVALSACSFTPPGAVTGSGNMVTQTFDVRDFDQIRLGTSGVMYIEQGDN CHHHHHHHHHHHHHHHHCCCCCCCCEECCCCEEEEEECCCCCCCEEECCCEEEEEECCCC FSLSIEADDNILPVLQVEVEKGVLTLRTTPEVSMLQFETLIYRVTLPKLSAIDLSGSADI EEEEEECCCCEEEEEEEEEECCEEEEECCCCCHHEEEEEEEEEEECCCEEEEECCCCCCE RVEDFTADSLDININGSGDVTFVNLDVASLSVRISGSGDMILPNVAAKTILAEVNSSGLM EEEEEECCEEEEEECCCCCEEEEEEEEEEEEEEECCCCCEEECCHHHHHHEEECCCCCCE EAAGTTDRLHVKVSGSGDLLAEKLKASIVEVAVNGSGDVTVWAVDTLDVSISGSGNVRYL EECCCCEEEEEEECCCCHHHHHHHHCEEEEEEECCCCCEEEEEEEEEEEEEECCCCEEEE GSPTLTKKISGGGDLSKLDS CCCCEEEEECCCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA