| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
Click here to switch to the map view.
The map label for this gene is 222526622
Identifier: 222526622
GI number: 222526622
Start: 4220252
End: 4220740
Strand: Reverse
Name: 222526622
Synonym: Chy400_3390
Alternate gene names: NA
Gene position: 4220740-4220252 (Counterclockwise)
Preceding gene: 222526623
Following gene: 222526621
Centisome position: 80.11
GC content: 53.99
Gene sequence:
>489_bases GTGAAAAGCATTCGCATCGTTCATCTGATATCCACGTTCGCAATTGGGTTGTTTGCCGGTTTGCTCTACACCTTTGAGCA GGGGGTCATCCCCGCCTTGATGACCCTGAACGCCACGGAATACGCCAGAGTCGAACAAGGGCTTATTCGCTCGCTCGATG CCTTCCCGACAGGCGTGATTGTCGTTGCCAATCTGGCGATGCTGTTGCCGTTGTATCCACTGGTGCGTCTGTGGCAACAG CGTAACACTGCCTATTGGCGTCTTACCGCACTGGGCTGGGCGCTCTTTTTCTTCGGGGTTGGGATATTCACAATTGTTCT AAATGTTCCAATCAATAATGCTGTACTGGCCTGGGATCCAGCAGCGCCGCCCGCCGACTGGGAGAACGCTCGCAGCACGT GGAACACGCTCAACGCCATCCGCACGCCGATTAATTACGTTAGCTTTTTGCTGATGATTTGGGCGTCTTTCGAGATGCCT GAAGGGTAG
Upstream 100 bases:
>100_bases TCAGGTCGGTGCATTGATGGGCGTGCTGGTGGTGATCATCGTGCTGCTCAAGATCTTCGAGCCGCCACTATGGTAATTGC TTGCAGCAAAGGAGTTTCGC
Downstream 100 bases:
>100_bases GCGAAGGGAACACCTTTCCTTGAGTCACGCTAGAGCAAAAACATTTACTAACCAAAGTTGCTACCTTTGCCACCACAGAG ACACTGAGGACACGGAGTAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 162; Mature: 162
Protein sequence:
>162_residues MKSIRIVHLISTFAIGLFAGLLYTFEQGVIPALMTLNATEYARVEQGLIRSLDAFPTGVIVVANLAMLLPLYPLVRLWQQ RNTAYWRLTALGWALFFFGVGIFTIVLNVPINNAVLAWDPAAPPADWENARSTWNTLNAIRTPINYVSFLLMIWASFEMP EG
Sequences:
>Translated_162_residues MKSIRIVHLISTFAIGLFAGLLYTFEQGVIPALMTLNATEYARVEQGLIRSLDAFPTGVIVVANLAMLLPLYPLVRLWQQ RNTAYWRLTALGWALFFFGVGIFTIVLNVPINNAVLAWDPAAPPADWENARSTWNTLNAIRTPINYVSFLLMIWASFEMP EG >Mature_162_residues MKSIRIVHLISTFAIGLFAGLLYTFEQGVIPALMTLNATEYARVEQGLIRSLDAFPTGVIVVANLAMLLPLYPLVRLWQQ RNTAYWRLTALGWALFFFGVGIFTIVLNVPINNAVLAWDPAAPPADWENARSTWNTLNAIRTPINYVSFLLMIWASFEMP EG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18174; Mature: 18174
Theoretical pI: Translated: 7.52; Mature: 7.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSIRIVHLISTFAIGLFAGLLYTFEQGVIPALMTLNATEYARVEQGLIRSLDAFPTGVI CCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHH VVANLAMLLPLYPLVRLWQQRNTAYWRLTALGWALFFFGVGIFTIVLNVPINNAVLAWDP HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECC AAPPADWENARSTWNTLNAIRTPINYVSFLLMIWASFEMPEG CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MKSIRIVHLISTFAIGLFAGLLYTFEQGVIPALMTLNATEYARVEQGLIRSLDAFPTGVI CCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHH VVANLAMLLPLYPLVRLWQQRNTAYWRLTALGWALFFFGVGIFTIVLNVPINNAVLAWDP HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECC AAPPADWENARSTWNTLNAIRTPINYVSFLLMIWASFEMPEG CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA