| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is yfbK [C]
Identifier: 222526590
GI number: 222526590
Start: 4184209
End: 4187052
Strand: Direct
Name: yfbK [C]
Synonym: Chy400_3358
Alternate gene names: 222526590
Gene position: 4184209-4187052 (Clockwise)
Preceding gene: 222526589
Following gene: 222526591
Centisome position: 79.41
GC content: 56.89
Gene sequence:
>2844_bases ATGCCGTATGTCTCTTTTATCTACCCTGAAGCACTCTGGTTGTTACTGATACCGATTGGGATGGTGGTGCTTGCGCTGCT GTCTCCACGTCGGTTGTCACCAGTTCGATTCTGGGGTAGTCTTGCCGTGCGTACTACCATTGCGGTAGTGCTGGTCTTTG CCTTTGCCGGTATTCAATTTGTGCGACCGGTAGATCGGCTAACGACTGTCTTTCTCCTCGACGGTAGTGACTCGATGCCG GCCTCGACCCGTGCCCAGGCAGAGGCATTTATTCGCGATGCGTTGCAAGCGATGCCTGCCGATGATCAGGCGGCAATCAT CGTGTTTGGCGATAATGCGCTGGTTGAGCGTGCTCCCGAAAGTGATCCCCGGTTAGGGCGAATTACGTCTATCCCAATCG CCAATCGCACCAATATCGAGGCGGCCATTCAGCTCGGCCTGGCACTGTTTCCCGCCGATACGCAAAAGCGACTGGTTCTT CTCTCGGACGGTGGTGAGAACAGCGGGCGGGCAATTGATGCCGCCCGCCTGGCCGCCAGCCGCGGTATCCCAATCGATAT TGTTGATCTCACCCTGGTTGATGCTGATGCAGAGGCGTTGATTGCCAGTGTTGAAGCACCGAATAACGTGCGTGATGGTC AAGAAGCACTGATTGTAGCGAATGTAGAGAGTAATGTCGCACAGTCGGCAGTTGTGCGTCTGATCGATGACCTGGGAGTC ATTGAGGAACGCAACCTTGAATTAACGCCGGGAACGACGCGGGTCGAATTTCTGGTACCGGTTGAAGGCAGTGGTTTTCG GCGCTATCGCGTGCAGGTTGAGGCGGCCAGTGATGGCCGTGTGCAAAATAATGAAGCTGCCGCGCTGATCCGTGTGCAGG GGCCGCCGCGTATTCTGCTCGTTGCGCAAACTGCTGCCGATGCCCGCCCCTTGATGACTGCACTGACCGCTACCGGCATA ATTGCCGAGCTGGTATCACCCGAAGCTGCACCGCGTACACTGGCCGATCTTAGTACCTACGATGCGCTGGTGCTAGTGAA TACGCCGGCACGGATGTTACCGGTTGGTCTAATGCAGGCGATTCCCGGTTATGTGCGCGATCTGGGTCGTGGCTTGTTAA TGATTGGTGGCGAAGACAGCTTTGGTGTCGGTGGATATGGTCGGACTGCGGTTGAAGAGGCGTTGCCGGTGTACATGGAC GTGCGTAACCGTGAGTTGCGTCCCGACCTGGCAATTGTCTTTGTGATTGATAAGTCAGGATCGATGGACGCCTGCCACTG TGCCGATCCTGACCGTGGTGCGCCGATCACATCTTCTTCCGAACGCAAGATCGATATTGCCAAAGATGCAATTGTGCAGG CTGCCGCCTTGCTTGGCCCGCAAGATACTGTTGGTGTTGTGACGTTTGATGGTGCAGCATCTGCAACCTTTCCGGCCACA CGCGGGGCTACGGTCGAACAGGTTATGGATGCAGTCAGCGGTGTTGAACCGCGTGGGCCAACTAACATTCGCGCCGGTTT GCTGCGGGCCGAAGAGATGTTGCAGCAGGTCGATGCCCGGATCAAACACATGATCCTGCTCACCGATGGGTGGGGAAGTG GTGGCGATCAGCTTGATCTGGCAGCACGCTTGCGCGAACAAGGCATTACTCTGACCGTGGTAGCTGCCGGGAGTGGTTCG GCAGCCTATCTGAAACAACTGGCTGCCGAAGGTGGTGGTCGGTATTATCCGGCTGCGGATATGGCCGAGGTGCCACAAAT CTTCGTTCAGGAAACCATTACCGCGATTGGGAATTATATCGTTGAACAGCCATTTGTGCCGGTACGGTATAGCAATAGTC CGATCCTGGCCGGTATCAATGCCACGCCACCGTTGTATGGCTACAATGGCAGCACGTTGAAAGATACTGCGCAGTTACTG CTGGCTACTGAAGATCAACAACCAATCCTGGCGACCTGGCAATTTGGCCTGGGGCGCAGTGCAGCCTGGTTGAGTGACAC TAAGGGGAAGTGGGCACGTGACTGGATCACGTGGGAAGGCTTTCCACGTTTTGCTGCTCAACTGGTTGGTGATTTGACGC CACGTGGTGGGCAGAATGTCAATACGGAAGTCTCCGTTGTTGGTGGCGAGACGGTAATTCGGCTGGTCACAGCCACAGCC CAGAATGACTTAACCGTTGTTGCTACCCTGATCGGTGGTGATGGCTCGCGGCGTGAAGTGCCGCTTATGCAGGTGGCTCC GAATCAATATCAGGCGCGATTGGAAAGCCCTGCTCCGGGAACCTACCTGGTGCAGATTGCCGGCACCAGCGCTGATCGCG TGGTGGTGCAAGAGACTGCCGGGATGGTTGTCCCCTATTCGTCGGAATATCGTAGTGCGCAAGCCAATCCTGGCCTGCTG GCAGAACTGGCAGCGACGACCAATGGTCGGTTGTTGAATGAACCGGCAGATGTCTTCGACCGTTTGAACCACGTCTTTTC GGCGCAGGAGGTGGCGTTGCCACTGCTCTGGCTGGCCCTGATGTTGTTACCGCTTGACATTGCCTTGCGGCGGTTGATGT TGCGGCGGAGTGATTTCGGCGCCCTGGGTTCGCTTGCCAGCCGATTGCGACCGGCAGGCGCGACGCCGGTCGCGCCTGAC CCGGTGCTCAGCCGGTTACGGGCCGCCCGTGATCAGGTTCGCCAACAGATAGCCGGTGAGCGGATTCAGGTACCACCAAC TGAAACAGCATCATCTGAACCGCAACCACCACCTGCACCACCTCCGACTGACGATGCGTTGAGCCGGTTACGTGCTGCCA AGGAGCGAGCACGCAGACAAATTACCGGTGACGGAGACAGGTAA
Upstream 100 bases:
>100_bases AGGGGATGACTTCGTCTAACGAAAGAGGTACTATTTTGTCTTGCCAGCGGCGGTCGTTCCCGGTACAATGCCTGTATGAT CATCCATCGCGAGATTGCCT
Downstream 100 bases:
>100_bases GTAATGGGTATGGTTGTTCATGAACAATCGACTGACACCTTTCAGTCCTGGCTTGGTCGCCTGCTGTTGGCACTCGTTAT CGGTTGTCTGGTTGGTATTC
Product: von Willebrand factor type A
Products: NA
Alternate protein names: Chloride Channel; Mg-Chelatase Subunit Chld; Membrane-Associated Protein; Von Willebrand Factor Type A Domain-Containing Protein; Von Willebrand Factor; Von Willebrand Factor Type A Domain Protein; Protein Containing A Von Willebrand Factor Type A Domain
Number of amino acids: Translated: 947; Mature: 946
Protein sequence:
>947_residues MPYVSFIYPEALWLLLIPIGMVVLALLSPRRLSPVRFWGSLAVRTTIAVVLVFAFAGIQFVRPVDRLTTVFLLDGSDSMP ASTRAQAEAFIRDALQAMPADDQAAIIVFGDNALVERAPESDPRLGRITSIPIANRTNIEAAIQLGLALFPADTQKRLVL LSDGGENSGRAIDAARLAASRGIPIDIVDLTLVDADAEALIASVEAPNNVRDGQEALIVANVESNVAQSAVVRLIDDLGV IEERNLELTPGTTRVEFLVPVEGSGFRRYRVQVEAASDGRVQNNEAAALIRVQGPPRILLVAQTAADARPLMTALTATGI IAELVSPEAAPRTLADLSTYDALVLVNTPARMLPVGLMQAIPGYVRDLGRGLLMIGGEDSFGVGGYGRTAVEEALPVYMD VRNRELRPDLAIVFVIDKSGSMDACHCADPDRGAPITSSSERKIDIAKDAIVQAAALLGPQDTVGVVTFDGAASATFPAT RGATVEQVMDAVSGVEPRGPTNIRAGLLRAEEMLQQVDARIKHMILLTDGWGSGGDQLDLAARLREQGITLTVVAAGSGS AAYLKQLAAEGGGRYYPAADMAEVPQIFVQETITAIGNYIVEQPFVPVRYSNSPILAGINATPPLYGYNGSTLKDTAQLL LATEDQQPILATWQFGLGRSAAWLSDTKGKWARDWITWEGFPRFAAQLVGDLTPRGGQNVNTEVSVVGGETVIRLVTATA QNDLTVVATLIGGDGSRREVPLMQVAPNQYQARLESPAPGTYLVQIAGTSADRVVVQETAGMVVPYSSEYRSAQANPGLL AELAATTNGRLLNEPADVFDRLNHVFSAQEVALPLLWLALMLLPLDIALRRLMLRRSDFGALGSLASRLRPAGATPVAPD PVLSRLRAARDQVRQQIAGERIQVPPTETASSEPQPPPAPPPTDDALSRLRAAKERARRQITGDGDR
Sequences:
>Translated_947_residues MPYVSFIYPEALWLLLIPIGMVVLALLSPRRLSPVRFWGSLAVRTTIAVVLVFAFAGIQFVRPVDRLTTVFLLDGSDSMP ASTRAQAEAFIRDALQAMPADDQAAIIVFGDNALVERAPESDPRLGRITSIPIANRTNIEAAIQLGLALFPADTQKRLVL LSDGGENSGRAIDAARLAASRGIPIDIVDLTLVDADAEALIASVEAPNNVRDGQEALIVANVESNVAQSAVVRLIDDLGV IEERNLELTPGTTRVEFLVPVEGSGFRRYRVQVEAASDGRVQNNEAAALIRVQGPPRILLVAQTAADARPLMTALTATGI IAELVSPEAAPRTLADLSTYDALVLVNTPARMLPVGLMQAIPGYVRDLGRGLLMIGGEDSFGVGGYGRTAVEEALPVYMD VRNRELRPDLAIVFVIDKSGSMDACHCADPDRGAPITSSSERKIDIAKDAIVQAAALLGPQDTVGVVTFDGAASATFPAT RGATVEQVMDAVSGVEPRGPTNIRAGLLRAEEMLQQVDARIKHMILLTDGWGSGGDQLDLAARLREQGITLTVVAAGSGS AAYLKQLAAEGGGRYYPAADMAEVPQIFVQETITAIGNYIVEQPFVPVRYSNSPILAGINATPPLYGYNGSTLKDTAQLL LATEDQQPILATWQFGLGRSAAWLSDTKGKWARDWITWEGFPRFAAQLVGDLTPRGGQNVNTEVSVVGGETVIRLVTATA QNDLTVVATLIGGDGSRREVPLMQVAPNQYQARLESPAPGTYLVQIAGTSADRVVVQETAGMVVPYSSEYRSAQANPGLL AELAATTNGRLLNEPADVFDRLNHVFSAQEVALPLLWLALMLLPLDIALRRLMLRRSDFGALGSLASRLRPAGATPVAPD PVLSRLRAARDQVRQQIAGERIQVPPTETASSEPQPPPAPPPTDDALSRLRAAKERARRQITGDGDR >Mature_946_residues PYVSFIYPEALWLLLIPIGMVVLALLSPRRLSPVRFWGSLAVRTTIAVVLVFAFAGIQFVRPVDRLTTVFLLDGSDSMPA STRAQAEAFIRDALQAMPADDQAAIIVFGDNALVERAPESDPRLGRITSIPIANRTNIEAAIQLGLALFPADTQKRLVLL SDGGENSGRAIDAARLAASRGIPIDIVDLTLVDADAEALIASVEAPNNVRDGQEALIVANVESNVAQSAVVRLIDDLGVI EERNLELTPGTTRVEFLVPVEGSGFRRYRVQVEAASDGRVQNNEAAALIRVQGPPRILLVAQTAADARPLMTALTATGII AELVSPEAAPRTLADLSTYDALVLVNTPARMLPVGLMQAIPGYVRDLGRGLLMIGGEDSFGVGGYGRTAVEEALPVYMDV RNRELRPDLAIVFVIDKSGSMDACHCADPDRGAPITSSSERKIDIAKDAIVQAAALLGPQDTVGVVTFDGAASATFPATR GATVEQVMDAVSGVEPRGPTNIRAGLLRAEEMLQQVDARIKHMILLTDGWGSGGDQLDLAARLREQGITLTVVAAGSGSA AYLKQLAAEGGGRYYPAADMAEVPQIFVQETITAIGNYIVEQPFVPVRYSNSPILAGINATPPLYGYNGSTLKDTAQLLL ATEDQQPILATWQFGLGRSAAWLSDTKGKWARDWITWEGFPRFAAQLVGDLTPRGGQNVNTEVSVVGGETVIRLVTATAQ NDLTVVATLIGGDGSRREVPLMQVAPNQYQARLESPAPGTYLVQIAGTSADRVVVQETAGMVVPYSSEYRSAQANPGLLA ELAATTNGRLLNEPADVFDRLNHVFSAQEVALPLLWLALMLLPLDIALRRLMLRRSDFGALGSLASRLRPAGATPVAPDP VLSRLRAARDQVRQQIAGERIQVPPTETASSEPQPPPAPPPTDDALSRLRAAKERARRQITGDGDR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 101030; Mature: 100898
Theoretical pI: Translated: 4.69; Mature: 4.69
Prosite motif: PS50234 VWFA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPYVSFIYPEALWLLLIPIGMVVLALLSPRRLSPVRFWGSLAVRTTIAVVLVFAFAGIQF CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH VRPVDRLTTVFLLDGSDSMPASTRAQAEAFIRDALQAMPADDQAAIIVFGDNALVERAPE HCCHHHCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHCCCC SDPRLGRITSIPIANRTNIEAAIQLGLALFPADTQKRLVLLSDGGENSGRAIDAARLAAS CCCCCCCEEECCCCCCCCHHHHHHHCEEEECCCCCCEEEEEECCCCCCCCCHHHHHHHHC RGIPIDIVDLTLVDADAEALIASVEAPNNVRDGQEALIVANVESNVAQSAVVRLIDDLGV CCCCEEEEEEEEECCCHHHHEEECCCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHCCC IEERNLELTPGTTRVEFLVPVEGSGFRRYRVQVEAASDGRVQNNEAAALIRVQGPPRILL CCCCCEEECCCCCEEEEEEEECCCCCEEEEEEEEECCCCCEECCCCEEEEEECCCCEEEE VAQTAADARPLMTALTATGIIAELVSPEAAPRTLADLSTYDALVLVNTPARMLPVGLMQA EEECCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCEEEEECCCHHHHHHHHHHH IPGYVRDLGRGLLMIGGEDSFGVGGYGRTAVEEALPVYMDVRNRELRPDLAIVFVIDKSG CCHHHHHHCCCEEEECCCCCCCCCCCCHHHHHHHCCEEEECCCCCCCCCEEEEEEEECCC SMDACHCADPDRGAPITSSSERKIDIAKDAIVQAAALLGPQDTVGVVTFDGAASATFPAT CCCEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCC RGATVEQVMDAVSGVEPRGPTNIRAGLLRAEEMLQQVDARIKHMILLTDGWGSGGDQLDL CCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCHHH AARLREQGITLTVVAAGSGSAAYLKQLAAEGGGRYYPAADMAEVPQIFVQETITAIGNYI HHHHHHCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH VEQPFVPVRYSNSPILAGINATPPLYGYNGSTLKDTAQLLLATEDQQPILATWQFGLGRS HHCCCEEEEECCCCEEEECCCCCCCCCCCCCCHHHHHHEEEECCCCCCEEEEEECCCCCC AAWLSDTKGKWARDWITWEGFPRFAAQLVGDLTPRGGQNVNTEVSVVGGETVIRLVTATA CCCCCCCCCCHHHCCEECCCCHHHHHHHHHCCCCCCCCCCCCEEEEECCCEEEEEEECCC QNDLTVVATLIGGDGSRREVPLMQVAPNQYQARLESPAPGTYLVQIAGTSADRVVVQETA CCCEEEEEEEECCCCCCCCCCEEEECCCHHHHHCCCCCCCEEEEEEECCCCCEEEEEECC GMVVPYSSEYRSAQANPGLLAELAATTNGRLLNEPADVFDRLNHVFSAQEVALPLLWLAL CEEEECCHHHCCCCCCCCHHHHHHHCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHH MLLPLDIALRRLMLRRSDFGALGSLASRLRPAGATPVAPDPVLSRLRAARDQVRQQIAGE HHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC RIQVPPTETASSEPQPPPAPPPTDDALSRLRAAKERARRQITGDGDR EEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure PYVSFIYPEALWLLLIPIGMVVLALLSPRRLSPVRFWGSLAVRTTIAVVLVFAFAGIQF CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH VRPVDRLTTVFLLDGSDSMPASTRAQAEAFIRDALQAMPADDQAAIIVFGDNALVERAPE HCCHHHCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHCCCC SDPRLGRITSIPIANRTNIEAAIQLGLALFPADTQKRLVLLSDGGENSGRAIDAARLAAS CCCCCCCEEECCCCCCCCHHHHHHHCEEEECCCCCCEEEEEECCCCCCCCCHHHHHHHHC RGIPIDIVDLTLVDADAEALIASVEAPNNVRDGQEALIVANVESNVAQSAVVRLIDDLGV CCCCEEEEEEEEECCCHHHHEEECCCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHCCC IEERNLELTPGTTRVEFLVPVEGSGFRRYRVQVEAASDGRVQNNEAAALIRVQGPPRILL CCCCCEEECCCCCEEEEEEEECCCCCEEEEEEEEECCCCCEECCCCEEEEEECCCCEEEE VAQTAADARPLMTALTATGIIAELVSPEAAPRTLADLSTYDALVLVNTPARMLPVGLMQA EEECCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCEEEEECCCHHHHHHHHHHH IPGYVRDLGRGLLMIGGEDSFGVGGYGRTAVEEALPVYMDVRNRELRPDLAIVFVIDKSG CCHHHHHHCCCEEEECCCCCCCCCCCCHHHHHHHCCEEEECCCCCCCCCEEEEEEEECCC SMDACHCADPDRGAPITSSSERKIDIAKDAIVQAAALLGPQDTVGVVTFDGAASATFPAT CCCEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCC RGATVEQVMDAVSGVEPRGPTNIRAGLLRAEEMLQQVDARIKHMILLTDGWGSGGDQLDL CCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCHHH AARLREQGITLTVVAAGSGSAAYLKQLAAEGGGRYYPAADMAEVPQIFVQETITAIGNYI HHHHHHCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH VEQPFVPVRYSNSPILAGINATPPLYGYNGSTLKDTAQLLLATEDQQPILATWQFGLGRS HHCCCEEEEECCCCEEEECCCCCCCCCCCCCCHHHHHHEEEECCCCCCEEEEEECCCCCC AAWLSDTKGKWARDWITWEGFPRFAAQLVGDLTPRGGQNVNTEVSVVGGETVIRLVTATA CCCCCCCCCCHHHCCEECCCCHHHHHHHHHCCCCCCCCCCCCEEEEECCCEEEEEEECCC QNDLTVVATLIGGDGSRREVPLMQVAPNQYQARLESPAPGTYLVQIAGTSADRVVVQETA CCCEEEEEEEECCCCCCCCCCEEEECCCHHHHHCCCCCCCEEEEEEECCCCCEEEEEECC GMVVPYSSEYRSAQANPGLLAELAATTNGRLLNEPADVFDRLNHVFSAQEVALPLLWLAL CEEEECCHHHCCCCCCCCHHHHHHHCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHH MLLPLDIALRRLMLRRSDFGALGSLASRLRPAGATPVAPDPVLSRLRAARDQVRQQIAGE HHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC RIQVPPTETASSEPQPPPAPPPTDDALSRLRAAKERARRQITGDGDR EEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA