| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is engA
Identifier: 222526586
GI number: 222526586
Start: 4176649
End: 4177998
Strand: Direct
Name: engA
Synonym: Chy400_3354
Alternate gene names: 222526586
Gene position: 4176649-4177998 (Clockwise)
Preceding gene: 222526583
Following gene: 222526587
Centisome position: 79.27
GC content: 54.74
Gene sequence:
>1350_bases ATGACAAAACCGATTGTGGCCATTGTTGGCCGCCCAAACGTTGGTAAATCGACATTTTTCAACCGCTTAATTGGCGAGCG GCGCGCGATTGTCGAGGACCTGCCCGGCACGACGCGCGACCGTCTCTATGGTGATACCTTTTGGAATGGGCGCGAGTTCA CCGTCGTCGATACGGCAGGTGTCCTCTTCGGTGGTGAAGATCCGAACCTGCCCGAAGCCGAGATTGCCCGTCGTACCCGT GCTCAGGCTGAACACGCGATTGCTGAGGCAGACGCGATCATCTTTATTGTTGACGGTCGTGACGGTCTGACTGCCGCTGA TTCTGATGTTGCCGACGTGTTACGCACCACGTCGAAACCGGTTGTGCTGGCCGTCAACAAGTGTGACAGTCAGGAACGCA TGCTCGATGCGGTTGAGTTTTATGCGCTCAATCTTGGCGAACCGATCCCGATGAGCGCATTTCATGGCCTGGGAACGGGG GATGTGCTCGACCGCCTGACCGAGTATCTGCCGCCAAAGACCTTTACCCAAGAGGAAGAGCGCCATCTACGGATTGCGAT TGTCGGTCGACCAAATGTAGGCAAGTCTTCGCTGCTGAACCGTCTGCTCGGTCAAGAGCGCAGCGTCGTAAGCTCGATTC CAGGTACTACACGCGATCCTATCGATACCACCATTACCTATCACGGTGAACCGATTACACTGATCGATACTGCCGGTATT CGGCGGGCCGGAAAGATCGAGCGTGGTATTGAGAAATATAGCGTGCTGCGCACATTGCGGGCAATTGAACGATGCGACGT AGCGCTGCTGCTGATCGATGCGACTGAAGGGGTAACAGCCCAGGATACCCACATTGCCGGTATGGTGGTTGAGGCCAAGA AAGGCTTGATCCTGGTCGTCAATAAGTGGGACGCCATTGAGAAAGACTCGCATACCTACTACGCATTCCAGGATCAGGTT CGCGAGGCATTTAAGTTTGTCGATTATGCACCGATTGTTTTTGTGTCGGCATTGACCGGTCAGCGCGTCTCGCACCTGCT CGACTATGCGCGTGAAGTGTATGTCCAGCGGCAGAAGCGAGTGCCGACCAGCGAGCTGAACAACTTCTTGCGGGAAGTGA TGTTGCAACAGCCACCGATGGCGGTCAAGAAGGGAGCACATCTGCGCCTGTACTATGCAGTGCAACCACAAACCGAGCCG CCGGTTTTTCTCTTCTTTGCCAACGATGGTGAGTTAGTCCACTGGTCGTATGCTCGCTACCTCGAAAATCGTTTGCGCGA ACGTTATGGTTTTCAGGGCACGCCAATCGTGATCGTGTTCCGTTCGCGTGAACGAAAAGAGGAACGTTGA
Upstream 100 bases:
>100_bases CCCTTCTACGACAACAATCGCAAACCCTGACCACTTCGTTTGCGATCCCTACTATAATAGAAGGCAGAGGACGCACCCAT ACTGGCGTCCAGGAGGAGTT
Downstream 100 bases:
>100_bases ACGTTGTTTCTATAGGCTTGTATCCGCTCATGATCATTGCTTAACGTCTATTGCAAGGCGGCATGTTGTTGATCGTTGCA GGTCAACACGGCTGCCTTTC
Product: GTP-binding protein EngA
Products: NA
Alternate protein names: GTP-binding protein EngA
Number of amino acids: Translated: 449; Mature: 448
Protein sequence:
>449_residues MTKPIVAIVGRPNVGKSTFFNRLIGERRAIVEDLPGTTRDRLYGDTFWNGREFTVVDTAGVLFGGEDPNLPEAEIARRTR AQAEHAIAEADAIIFIVDGRDGLTAADSDVADVLRTTSKPVVLAVNKCDSQERMLDAVEFYALNLGEPIPMSAFHGLGTG DVLDRLTEYLPPKTFTQEEERHLRIAIVGRPNVGKSSLLNRLLGQERSVVSSIPGTTRDPIDTTITYHGEPITLIDTAGI RRAGKIERGIEKYSVLRTLRAIERCDVALLLIDATEGVTAQDTHIAGMVVEAKKGLILVVNKWDAIEKDSHTYYAFQDQV REAFKFVDYAPIVFVSALTGQRVSHLLDYAREVYVQRQKRVPTSELNNFLREVMLQQPPMAVKKGAHLRLYYAVQPQTEP PVFLFFANDGELVHWSYARYLENRLRERYGFQGTPIVIVFRSRERKEER
Sequences:
>Translated_449_residues MTKPIVAIVGRPNVGKSTFFNRLIGERRAIVEDLPGTTRDRLYGDTFWNGREFTVVDTAGVLFGGEDPNLPEAEIARRTR AQAEHAIAEADAIIFIVDGRDGLTAADSDVADVLRTTSKPVVLAVNKCDSQERMLDAVEFYALNLGEPIPMSAFHGLGTG DVLDRLTEYLPPKTFTQEEERHLRIAIVGRPNVGKSSLLNRLLGQERSVVSSIPGTTRDPIDTTITYHGEPITLIDTAGI RRAGKIERGIEKYSVLRTLRAIERCDVALLLIDATEGVTAQDTHIAGMVVEAKKGLILVVNKWDAIEKDSHTYYAFQDQV REAFKFVDYAPIVFVSALTGQRVSHLLDYAREVYVQRQKRVPTSELNNFLREVMLQQPPMAVKKGAHLRLYYAVQPQTEP PVFLFFANDGELVHWSYARYLENRLRERYGFQGTPIVIVFRSRERKEER >Mature_448_residues TKPIVAIVGRPNVGKSTFFNRLIGERRAIVEDLPGTTRDRLYGDTFWNGREFTVVDTAGVLFGGEDPNLPEAEIARRTRA QAEHAIAEADAIIFIVDGRDGLTAADSDVADVLRTTSKPVVLAVNKCDSQERMLDAVEFYALNLGEPIPMSAFHGLGTGD VLDRLTEYLPPKTFTQEEERHLRIAIVGRPNVGKSSLLNRLLGQERSVVSSIPGTTRDPIDTTITYHGEPITLIDTAGIR RAGKIERGIEKYSVLRTLRAIERCDVALLLIDATEGVTAQDTHIAGMVVEAKKGLILVVNKWDAIEKDSHTYYAFQDQVR EAFKFVDYAPIVFVSALTGQRVSHLLDYAREVYVQRQKRVPTSELNNFLREVMLQQPPMAVKKGAHLRLYYAVQPQTEPP VFLFFANDGELVHWSYARYLENRLRERYGFQGTPIVIVFRSRERKEER
Specific function: GTPase that plays an essential role in the late steps of ribosome biogenesis
COG id: COG1160
COG function: function code R; Predicted GTPases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 KH-like domain
Homologues:
Organism=Homo sapiens, GI193082991, Length=133, Percent_Identity=33.0827067669173, Blast_Score=69, Evalue=1e-11, Organism=Homo sapiens, GI193082988, Length=134, Percent_Identity=32.8358208955224, Blast_Score=69, Evalue=1e-11, Organism=Escherichia coli, GI87082120, Length=474, Percent_Identity=39.873417721519, Blast_Score=315, Evalue=5e-87, Organism=Escherichia coli, GI1788919, Length=175, Percent_Identity=34.8571428571429, Blast_Score=83, Evalue=3e-17, Organism=Escherichia coli, GI2367268, Length=93, Percent_Identity=43.010752688172, Blast_Score=79, Evalue=7e-16, Organism=Caenorhabditis elegans, GI17507259, Length=135, Percent_Identity=33.3333333333333, Blast_Score=76, Evalue=3e-14, Organism=Saccharomyces cerevisiae, GI6323665, Length=184, Percent_Identity=34.2391304347826, Blast_Score=91, Evalue=3e-19, Organism=Drosophila melanogaster, GI45550813, Length=144, Percent_Identity=36.8055555555556, Blast_Score=72, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): DER_CHLAA (A9WHH9)
Other databases:
- EMBL: CP000909 - RefSeq: YP_001636694.1 - ProteinModelPortal: A9WHH9 - SMR: A9WHH9 - GeneID: 5827580 - GenomeReviews: CP000909_GR - KEGG: cau:Caur_3106 - HOGENOM: HBG592135 - OMA: TRDRTYQ - ProtClustDB: PRK00093 - GO: GO:0005622 - HAMAP: MF_00195 - InterPro: IPR003593 - InterPro: IPR016484 - InterPro: IPR006073 - InterPro: IPR015946 - InterPro: IPR002917 - InterPro: IPR005225 - Gene3D: G3DSA:3.30.300.20 - PIRSF: PIRSF006485 - PRINTS: PR00326 - SMART: SM00382 - TIGRFAMs: TIGR03594 - TIGRFAMs: TIGR00231
Pfam domain/function: PF01926 MMR_HSR1
EC number: NA
Molecular weight: Translated: 50514; Mature: 50383
Theoretical pI: Translated: 6.81; Mature: 6.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKPIVAIVGRPNVGKSTFFNRLIGERRAIVEDLPGTTRDRLYGDTFWNGREFTVVDTAG CCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCEEEEEEECCC VLFGGEDPNLPEAEIARRTRAQAEHAIAEADAIIFIVDGRDGLTAADSDVADVLRTTSKP EEECCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHHCCCCC VVLAVNKCDSQERMLDAVEFYALNLGEPIPMSAFHGLGTGDVLDRLTEYLPPKTFTQEEE EEEEEECCCCHHHHHHHHHHHHCCCCCCCCHHHHCCCCCHHHHHHHHHHCCCCCCCCCCC RHLRIAIVGRPNVGKSSLLNRLLGQERSVVSSIPGTTRDPIDTTITYHGEPITLIDTAGI CEEEEEEEECCCCCHHHHHHHHHCCHHHHHHHCCCCCCCCCCCEEEECCCEEEEEECCCC RRAGKIERGIEKYSVLRTLRAIERCDVALLLIDATEGVTAQDTHIAGMVVEAKKGLILVV CHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCEEEEEEEECCCCEEEEE NKWDAIEKDSHTYYAFQDQVREAFKFVDYAPIVFVSALTGQRVSHLLDYAREVYVQRQKR ECCCCCCCCCCEEEHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC VPTSELNNFLREVMLQQPPMAVKKGAHLRLYYAVQPQTEPPVFLFFANDGELVHWSYARY CCHHHHHHHHHHHHHCCCCHHHHCCCEEEEEEEECCCCCCCEEEEECCCCCEEEHHHHHH LENRLRERYGFQGTPIVIVFRSRERKEER HHHHHHHHHCCCCCCEEEEECCCCCCCCC >Mature Secondary Structure TKPIVAIVGRPNVGKSTFFNRLIGERRAIVEDLPGTTRDRLYGDTFWNGREFTVVDTAG CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCEEEEEEECCC VLFGGEDPNLPEAEIARRTRAQAEHAIAEADAIIFIVDGRDGLTAADSDVADVLRTTSKP EEECCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHHCCCCC VVLAVNKCDSQERMLDAVEFYALNLGEPIPMSAFHGLGTGDVLDRLTEYLPPKTFTQEEE EEEEEECCCCHHHHHHHHHHHHCCCCCCCCHHHHCCCCCHHHHHHHHHHCCCCCCCCCCC RHLRIAIVGRPNVGKSSLLNRLLGQERSVVSSIPGTTRDPIDTTITYHGEPITLIDTAGI CEEEEEEEECCCCCHHHHHHHHHCCHHHHHHHCCCCCCCCCCCEEEECCCEEEEEECCCC RRAGKIERGIEKYSVLRTLRAIERCDVALLLIDATEGVTAQDTHIAGMVVEAKKGLILVV CHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCEEEEEEEECCCCEEEEE NKWDAIEKDSHTYYAFQDQVREAFKFVDYAPIVFVSALTGQRVSHLLDYAREVYVQRQKR ECCCCCCCCCCEEEHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC VPTSELNNFLREVMLQQPPMAVKKGAHLRLYYAVQPQTEPPVFLFFANDGELVHWSYARY CCHHHHHHHHHHHHHCCCCHHHHCCCEEEEEEEECCCCCCCEEEEECCCCCEEEHHHHHH LENRLRERYGFQGTPIVIVFRSRERKEER HHHHHHHHHCCCCCCEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA