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The map label for this gene is apl [H]

Identifier: 222526578

GI number: 222526578

Start: 4170810

End: 4171457

Strand: Direct

Name: apl [H]

Synonym: Chy400_3346

Alternate gene names: 222526578

Gene position: 4170810-4171457 (Clockwise)

Preceding gene: 222526576

Following gene: 222526579

Centisome position: 79.16

GC content: 53.7

Gene sequence:

>648_bases
ATGGGTCGAATACTGGAACAACTCGGATTGTGGATTGAGAGTATTATTCTCGCCATCGGCTATCCTGGCATTACGCTGGT
CATGCTCGCCGAAAACCTCTTTCCTCCTATCCCGTCTGAGCTGGTAATGCCGTTTGCCGGCTTCCTGGTAGGGCGCGGTG
AGATGAACCTCTTTCTGGCTATTGCCGCGGGAACGCTCGGTTCAGTTCTGGGTGCAATTGTCCTCTACTACATTGGCATG
CTGGCCGGTGAACCGCTGGTACGGCCCTTTTTCCGCCATTATGGCCGTTTCTTTCTGCTCTCCGAGCAAGACCTCGATAA
AGCCCTTAATGCGTTTACCACCCATGGCGAGATTATCGTGTTGGGTGGCCGTGTGATCCCGATCATTCGCAGCCTGATTT
CGTTGCCGGCTGGTATGAATCGCATGCCGCTGAGCCGGTTTTTGCTCTTTACCACCATTGGTTCGACGATCTGGACATCG
CTGCTGACTATTGGCGGCGTCATTCTTGGCGCCAACTGGGAATTTGTAATTGAGATCGTTGATCAGTATCAGAAGCTGGT
GCTGGTGGCACTGGCCATCGCTGTAGTAGTTTTCGTTGTGCAGCGACTCCGCGGTTTGCGCAAGCCGATGCTGCCCCAGA
GTGAGTAA

Upstream 100 bases:

>100_bases
GTCTCATCACCTTCCTGCCTACTTGACGCCAACCGATCCATCATCTACCATACCAGACAGCACAGCCTGGTGCGGAACGA
CAACTAAAACGGAGAATAGA

Downstream 100 bases:

>100_bases
CTGGCTGGCTTCGTCGTTATGAACCAGGATGATAGTTTGGTCACAGATCAGGAAGCCAGGTTGAACCAGCTCTCGCCCCT
TACGGTTACTGAACGTGAGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 215; Mature: 214

Protein sequence:

>215_residues
MGRILEQLGLWIESIILAIGYPGITLVMLAENLFPPIPSELVMPFAGFLVGRGEMNLFLAIAAGTLGSVLGAIVLYYIGM
LAGEPLVRPFFRHYGRFFLLSEQDLDKALNAFTTHGEIIVLGGRVIPIIRSLISLPAGMNRMPLSRFLLFTTIGSTIWTS
LLTIGGVILGANWEFVIEIVDQYQKLVLVALAIAVVVFVVQRLRGLRKPMLPQSE

Sequences:

>Translated_215_residues
MGRILEQLGLWIESIILAIGYPGITLVMLAENLFPPIPSELVMPFAGFLVGRGEMNLFLAIAAGTLGSVLGAIVLYYIGM
LAGEPLVRPFFRHYGRFFLLSEQDLDKALNAFTTHGEIIVLGGRVIPIIRSLISLPAGMNRMPLSRFLLFTTIGSTIWTS
LLTIGGVILGANWEFVIEIVDQYQKLVLVALAIAVVVFVVQRLRGLRKPMLPQSE
>Mature_214_residues
GRILEQLGLWIESIILAIGYPGITLVMLAENLFPPIPSELVMPFAGFLVGRGEMNLFLAIAAGTLGSVLGAIVLYYIGML
AGEPLVRPFFRHYGRFFLLSEQDLDKALNAFTTHGEIIVLGGRVIPIIRSLISLPAGMNRMPLSRFLLFTTIGSTIWTSL
LTIGGVILGANWEFVIEIVDQYQKLVLVALAIAVVVFVVQRLRGLRKPMLPQSE

Specific function: Unknown

COG id: COG0586

COG function: function code S; Uncharacterized membrane-associated protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dedA family [H]

Homologues:

Organism=Escherichia coli, GI1786252, Length=163, Percent_Identity=27.6073619631902, Blast_Score=64, Evalue=6e-12,
Organism=Escherichia coli, GI1788656, Length=196, Percent_Identity=25, Blast_Score=61, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 23609; Mature: 23478

Theoretical pI: Translated: 8.91; Mature: 8.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRILEQLGLWIESIILAIGYPGITLVMLAENLFPPIPSELVMPFAGFLVGRGEMNLFLA
CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHEEEH
IAAGTLGSVLGAIVLYYIGMLAGEPLVRPFFRHYGRFFLLSEQDLDKALNAFTTHGEIIV
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCEEEECHHHHHHHHHHHHCCCCEEE
LGGRVIPIIRSLISLPAGMNRMPLSRFLLFTTIGSTIWTSLLTIGGVILGANWEFVIEIV
ECCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
DQYQKLVLVALAIAVVVFVVQRLRGLRKPMLPQSE
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
GRILEQLGLWIESIILAIGYPGITLVMLAENLFPPIPSELVMPFAGFLVGRGEMNLFLA
CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHEEEH
IAAGTLGSVLGAIVLYYIGMLAGEPLVRPFFRHYGRFFLLSEQDLDKALNAFTTHGEIIV
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCEEEECHHHHHHHHHHHHCCCCEEE
LGGRVIPIIRSLISLPAGMNRMPLSRFLLFTTIGSTIWTSLLTIGGVILGANWEFVIEIV
ECCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
DQYQKLVLVALAIAVVVFVVQRLRGLRKPMLPQSE
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11337471 [H]