Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
---|---|
Accession | NC_012032 |
Length | 5,268,950 |
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The map label for this gene is mmuM [H]
Identifier: 222526567
GI number: 222526567
Start: 4157239
End: 4158198
Strand: Direct
Name: mmuM [H]
Synonym: Chy400_3335
Alternate gene names: 222526567
Gene position: 4157239-4158198 (Clockwise)
Preceding gene: 222526566
Following gene: 222526568
Centisome position: 78.9
GC content: 56.88
Gene sequence:
>960_bases ATGAGTTCGCCAAATCCGATAACTGCTGCACTTGCCCAACGCCCACTTCTAATCCTCGACGGGGCATTGGCTACGGAGCT GGAGCGGCGTGGTTGCGATCTCGCCGATCCGCTCTGGTCGGCGAAGGTGTTGATCGAAAATCCATCGTTGATCCAGGCTG TGCACGCCGACTATTTTGCGGCTGGTGCTGATGTTGCCATTACTGCGAGTTATCAGGCAACGATTCCCGGTTTTATGGCG CGTGGAATCGCTCCTGATCAGGCAATTCTGCTCTTACAGCGCTCGGTCGCATTGGCGCAGGCTGCGCGTGATCAATTTTG GGCTGACCCGGCGAATCGCGAAGGGCGTCTACGACCACTGGTTGCAGCCTCGGTAGGCCCGTATGGTGCATTTTTGCACG ACGGCTCGGAATATCGCGGCAACTACGGCTTATCCGTGGCTGAATTGATTGAGTTCCATCGACCTCGCATGGCTGCTCTG GCGGCTGCCCGGCCTGATCTCTTTGCCTGTGAAACGATCCCCTGTCTCGACGAAGCACGGGCATTAGTTGCGCTCCTGCC CGAATTTCCGCACCTGACCGCATGGATTAGTTTCAGTGCTCGCGATGGTGCTCACACCGCTCAGGGTGAACCAATTGCCG AATGTGCTGCTGAGATTGCTGCTCATCCCCAGGTGGCCGCAATTGGAGTTAACTGTACAGCTCCTCGCTTCCTTCCCGAT CTCATTCGCGCTGTACAGGCTGTTACCGACAAGCCGATTGTGGTCTACCCTAATTCGGGAGAAGTCTATGACCCGGTTGG GCAATGTTGGATTGGTACGACTGAGATTGACGATTTTGTAGCCCAGGCCAGGCAATGGTACGCTATGGGGGCACGGCTGA TCGGTGGTTGCTGCCGGACTACTCCTGACCACATTCGAGCGTTGGCTGCCTGGGCCGCTGCCGGGGTGAATCATGATTGA
Upstream 100 bases:
>100_bases ATCTGGCTCAGGTTGGAGCCGGTACCACTCCTGCGACGAAGCCACGGAGGAGTTAGCGATTCGCAAAGCCTATTTCTCGC CGAAAAGAGAGATGCTCAAG
Downstream 100 bases:
>100_bases GGCATGGCCGTTCGATCCTTTCGTTATTCCCTCGCCGCAGGTATTACGAGTCGGTGCATACCCACTGCACGGCGCGCCGG TTTTTCACGTCGATCCTGAT
Product: homocysteine methyltransferase
Products: NA
Alternate protein names: S-methylmethionine:homocysteine methyltransferase [H]
Number of amino acids: Translated: 319; Mature: 318
Protein sequence:
>319_residues MSSPNPITAALAQRPLLILDGALATELERRGCDLADPLWSAKVLIENPSLIQAVHADYFAAGADVAITASYQATIPGFMA RGIAPDQAILLLQRSVALAQAARDQFWADPANREGRLRPLVAASVGPYGAFLHDGSEYRGNYGLSVAELIEFHRPRMAAL AAARPDLFACETIPCLDEARALVALLPEFPHLTAWISFSARDGAHTAQGEPIAECAAEIAAHPQVAAIGVNCTAPRFLPD LIRAVQAVTDKPIVVYPNSGEVYDPVGQCWIGTTEIDDFVAQARQWYAMGARLIGGCCRTTPDHIRALAAWAAAGVNHD
Sequences:
>Translated_319_residues MSSPNPITAALAQRPLLILDGALATELERRGCDLADPLWSAKVLIENPSLIQAVHADYFAAGADVAITASYQATIPGFMA RGIAPDQAILLLQRSVALAQAARDQFWADPANREGRLRPLVAASVGPYGAFLHDGSEYRGNYGLSVAELIEFHRPRMAAL AAARPDLFACETIPCLDEARALVALLPEFPHLTAWISFSARDGAHTAQGEPIAECAAEIAAHPQVAAIGVNCTAPRFLPD LIRAVQAVTDKPIVVYPNSGEVYDPVGQCWIGTTEIDDFVAQARQWYAMGARLIGGCCRTTPDHIRALAAWAAAGVNHD >Mature_318_residues SSPNPITAALAQRPLLILDGALATELERRGCDLADPLWSAKVLIENPSLIQAVHADYFAAGADVAITASYQATIPGFMAR GIAPDQAILLLQRSVALAQAARDQFWADPANREGRLRPLVAASVGPYGAFLHDGSEYRGNYGLSVAELIEFHRPRMAALA AARPDLFACETIPCLDEARALVALLPEFPHLTAWISFSARDGAHTAQGEPIAECAAEIAAHPQVAAIGVNCTAPRFLPDL IRAVQAVTDKPIVVYPNSGEVYDPVGQCWIGTTEIDDFVAQARQWYAMGARLIGGCCRTTPDHIRALAAWAAAGVNHD
Specific function: Catalyzes Methyl Transfer From S-Methylmethionine Or S- Adenosylmethionine (Less Efficient) To Homocysteine, Selenohomocysteine And Less Efficiently Selenocysteine. [C]
COG id: COG2040
COG function: function code E; Homocysteine/selenocysteine methylase (S-methylmethionine-dependent)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 Hcy-binding domain [H]
Homologues:
Organism=Homo sapiens, GI169790923, Length=327, Percent_Identity=25.0764525993884, Blast_Score=73, Evalue=3e-13, Organism=Escherichia coli, GI1786456, Length=314, Percent_Identity=51.9108280254777, Blast_Score=298, Evalue=3e-82, Organism=Caenorhabditis elegans, GI17569783, Length=271, Percent_Identity=26.1992619926199, Blast_Score=75, Evalue=6e-14, Organism=Saccharomyces cerevisiae, GI6324982, Length=328, Percent_Identity=28.3536585365854, Blast_Score=136, Evalue=5e-33, Organism=Saccharomyces cerevisiae, GI6322966, Length=326, Percent_Identity=27.9141104294479, Blast_Score=135, Evalue=1e-32, Organism=Saccharomyces cerevisiae, GI6323983, Length=91, Percent_Identity=35.1648351648352, Blast_Score=75, Evalue=9e-15, Organism=Drosophila melanogaster, GI24585077, Length=315, Percent_Identity=35.5555555555556, Blast_Score=207, Evalue=8e-54, Organism=Drosophila melanogaster, GI20129603, Length=314, Percent_Identity=36.9426751592357, Blast_Score=197, Evalue=7e-51,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003726 [H]
Pfam domain/function: PF02574 S-methyl_trans [H]
EC number: =2.1.1.10 [H]
Molecular weight: Translated: 34053; Mature: 33922
Theoretical pI: Translated: 4.98; Mature: 4.98
Prosite motif: PS50970 HCY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSPNPITAALAQRPLLILDGALATELERRGCDLADPLWSAKVLIENPSLIQAVHADYFA CCCCCCHHHHHHHCCEEEECCHHHHHHHHCCCCCCCCHHCCEEEEECCHHHHHHHHHHHH AGADVAITASYQATIPGFMARGIAPDQAILLLQRSVALAQAARDQFWADPANREGRLRPL CCCCEEEEECCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEE VAASVGPYGAFLHDGSEYRGNYGLSVAELIEFHRPRMAALAAARPDLFACETIPCLDEAR EEECCCCCHHHHCCCCHHCCCCCCCHHHHHHHCCCHHHHHHHCCCCCEEECCCCCHHHHH ALVALLPEFPHLTAWISFSARDGAHTAQGEPIAECAAEIAAHPQVAAIGVNCTAPRFLPD HHHHHHCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCHHHHHH LIRAVQAVTDKPIVVYPNSGEVYDPVGQCWIGTTEIDDFVAQARQWYAMGARLIGGCCRT HHHHHHHHCCCCEEEECCCCCEECCCHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHCC TPDHIRALAAWAAAGVNHD CHHHHHHHHHHHHHCCCCC >Mature Secondary Structure SSPNPITAALAQRPLLILDGALATELERRGCDLADPLWSAKVLIENPSLIQAVHADYFA CCCCCHHHHHHHCCEEEECCHHHHHHHHCCCCCCCCHHCCEEEEECCHHHHHHHHHHHH AGADVAITASYQATIPGFMARGIAPDQAILLLQRSVALAQAARDQFWADPANREGRLRPL CCCCEEEEECCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEE VAASVGPYGAFLHDGSEYRGNYGLSVAELIEFHRPRMAALAAARPDLFACETIPCLDEAR EEECCCCCHHHHCCCCHHCCCCCCCHHHHHHHCCCHHHHHHHCCCCCEEECCCCCHHHHH ALVALLPEFPHLTAWISFSARDGAHTAQGEPIAECAAEIAAHPQVAAIGVNCTAPRFLPD HHHHHHCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCHHHHHH LIRAVQAVTDKPIVVYPNSGEVYDPVGQCWIGTTEIDDFVAQARQWYAMGARLIGGCCRT HHHHHHHHCCCCEEEECCCCCEECCCHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHCC TPDHIRALAAWAAAGVNHD CHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]