Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
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Accession | NC_012032 |
Length | 5,268,950 |
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The map label for this gene is 222526560
Identifier: 222526560
GI number: 222526560
Start: 4150283
End: 4150597
Strand: Direct
Name: 222526560
Synonym: Chy400_3328
Alternate gene names: NA
Gene position: 4150283-4150597 (Clockwise)
Preceding gene: 222526559
Following gene: 222526561
Centisome position: 78.77
GC content: 54.29
Gene sequence:
>315_bases ATGTCCGGGCTAACACAACCTCTGCCGCATTGGGACACTCCAGCGCGGGCAAGAGTGCGCCCGGAACCATCCCACCGGGT TGTGCGGGCTGAAGCCATCCCTCACGACGTAAAAGCCCCGGTGGGGCTGGATAAGAGTGCGTTCAGGTTCGTTCCATGGC TGGAGTTTAACAATCGTTGGCCTCTTCTTAGTGGATTTGTCTTACCTCATCCTGGTCTGGTTGGCTTGAGTCTATTGATT GCCTTCACCGCAATCGTATGGTATCAAGAACAAGAGCTTTTGGAAGAAGCGGAATGCACGATTCACAGCCCGTGA
Upstream 100 bases:
>100_bases ACTATCGGGTGAACCTGCCGTTGGTCGTCAAGTAAAGGTATGCTCCAGGGGAGAGGTTCCGTCGTTCCTCTCCCCTGCTG ATGTCTTAGGGACGGACGGC
Downstream 100 bases:
>100_bases TGTGACCAGGCACTGCGGAATCTGAGCCGCACACATCGTCATAGGCGATCACGGAGCCTGACATCACCTGTAGCTGACTG GCGGTAATCGGGGTGTTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 104; Mature: 103
Protein sequence:
>104_residues MSGLTQPLPHWDTPARARVRPEPSHRVVRAEAIPHDVKAPVGLDKSAFRFVPWLEFNNRWPLLSGFVLPHPGLVGLSLLI AFTAIVWYQEQELLEEAECTIHSP
Sequences:
>Translated_104_residues MSGLTQPLPHWDTPARARVRPEPSHRVVRAEAIPHDVKAPVGLDKSAFRFVPWLEFNNRWPLLSGFVLPHPGLVGLSLLI AFTAIVWYQEQELLEEAECTIHSP >Mature_103_residues SGLTQPLPHWDTPARARVRPEPSHRVVRAEAIPHDVKAPVGLDKSAFRFVPWLEFNNRWPLLSGFVLPHPGLVGLSLLIA FTAIVWYQEQELLEEAECTIHSP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11756; Mature: 11624
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGLTQPLPHWDTPARARVRPEPSHRVVRAEAIPHDVKAPVGLDKSAFRFVPWLEFNNRW CCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCEEECEEEECCCC PLLSGFVLPHPGLVGLSLLIAFTAIVWYQEQELLEEAECTIHSP CEEECEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure SGLTQPLPHWDTPARARVRPEPSHRVVRAEAIPHDVKAPVGLDKSAFRFVPWLEFNNRW CCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCEEECEEEECCCC PLLSGFVLPHPGLVGLSLLIAFTAIVWYQEQELLEEAECTIHSP CEEECEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA