Definition Chloroflexus sp. Y-400-fl chromosome, complete genome.
Accession NC_012032
Length 5,268,950

Click here to switch to the map view.

The map label for this gene is 222526557

Identifier: 222526557

GI number: 222526557

Start: 4142384

End: 4142494

Strand: Direct

Name: 222526557

Synonym: Chy400_3325

Alternate gene names: NA

Gene position: 4142384-4142494 (Clockwise)

Preceding gene: 222526555

Following gene: 222526558

Centisome position: 78.62

GC content: 36.94

Gene sequence:

>111_bases
ATGCAGTCATGGTTGTCAATTTATTGTCATACTGCCGATAGACTACATCGCTATAATGATAGTATCGATTTGTTATATCA
GCGCTTGCAAGTGAAAACGTATTTCGCATGA

Upstream 100 bases:

>100_bases
TGCAAACGTAGTTTATGCTAACAGGGAGCGGGGTGTGTGTCAAGCGGAAAACGCGAGCGGATGTTGGGAGTATTCGGACA
CCTCACAGGAAGGTGTAGCC

Downstream 100 bases:

>100_bases
CTGGGCGTCCGGATCAGTTCCAGAAATACGTACCAGACATCTATGAATGCAGCACCGATCATTGAATTTCGCTTATTCGG
CGTTCCACGTCTACGTTTCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 36; Mature: 36

Protein sequence:

>36_residues
MQSWLSIYCHTADRLHRYNDSIDLLYQRLQVKTYFA

Sequences:

>Translated_36_residues
MQSWLSIYCHTADRLHRYNDSIDLLYQRLQVKTYFA
>Mature_36_residues
MQSWLSIYCHTADRLHRYNDSIDLLYQRLQVKTYFA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 4450; Mature: 4450

Theoretical pI: Translated: 8.48; Mature: 8.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQSWLSIYCHTADRLHRYNDSIDLLYQRLQVKTYFA
CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MQSWLSIYCHTADRLHRYNDSIDLLYQRLQVKTYFA
CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA