Definition Chloroflexus sp. Y-400-fl chromosome, complete genome.
Accession NC_012032
Length 5,268,950

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The map label for this gene is 222526491

Identifier: 222526491

GI number: 222526491

Start: 4064169

End: 4064495

Strand: Direct

Name: 222526491

Synonym: Chy400_3258

Alternate gene names: NA

Gene position: 4064169-4064495 (Clockwise)

Preceding gene: 222526490

Following gene: 222526492

Centisome position: 77.13

GC content: 56.57

Gene sequence:

>327_bases
ATGGCGGCCAACCCTAAGACCGCTACACCACGTCCACGGCACGTACCGAAGCGTATGTGCATTGTTTGTCGCCAGAGTGA
TGCCAAACGTGCATTGATTCGGCTGGTACGCAATGCTGATGGGCGCGTGGTGATCGATCCGACCGGGAAGCAACCCGGAC
GAGGTGCGTATCTGTGTCGCAATCCATTATGTTGGGCGCAGGCGTTGCGTCGCAATGCTCTCGAACGGGCATTGAAGATT
GCGACACTGCATCCAGATGATCGGGCAGTCATCGAAGCAATGGGGCAACAGTTGCTTCAGGAAACGGAGTCAACGGCGTC
TGCGTAA

Upstream 100 bases:

>100_bases
GCGACCTCGCAGAAGATTTTTATCTATTACAATGACCGCCTGTTCGCTTCCTACATTTTGCTGGAAGGTGGACAGGTAGT
GCCCGATGAGGAGTAAGGTC

Downstream 100 bases:

>100_bases
ACGCTTTTGCACGCATCGAAGAATTCAGAGGCTCGTCTGCGTGTGATTGGCTAGTCTGTAAGAGACAACTGCTCTAAGCG
CCGTTGACGTACACGTGCCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 108; Mature: 107

Protein sequence:

>108_residues
MAANPKTATPRPRHVPKRMCIVCRQSDAKRALIRLVRNADGRVVIDPTGKQPGRGAYLCRNPLCWAQALRRNALERALKI
ATLHPDDRAVIEAMGQQLLQETESTASA

Sequences:

>Translated_108_residues
MAANPKTATPRPRHVPKRMCIVCRQSDAKRALIRLVRNADGRVVIDPTGKQPGRGAYLCRNPLCWAQALRRNALERALKI
ATLHPDDRAVIEAMGQQLLQETESTASA
>Mature_107_residues
AANPKTATPRPRHVPKRMCIVCRQSDAKRALIRLVRNADGRVVIDPTGKQPGRGAYLCRNPLCWAQALRRNALERALKIA
TLHPDDRAVIEAMGQQLLQETESTASA

Specific function: Unknown

COG id: COG2740

COG function: function code K; Predicted nucleic-acid-binding protein implicated in transcription termination

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11952; Mature: 11821

Theoretical pI: Translated: 11.16; Mature: 11.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.7 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
3.7 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAANPKTATPRPRHVPKRMCIVCRQSDAKRALIRLVRNADGRVVIDPTGKQPGRGAYLCR
CCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCEEECCCCCCCCCCCEEEC
NPLCWAQALRRNALERALKIATLHPDDRAVIEAMGQQLLQETESTASA
CCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
AANPKTATPRPRHVPKRMCIVCRQSDAKRALIRLVRNADGRVVIDPTGKQPGRGAYLCR
CCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCEEECCCCCCCCCCCEEEC
NPLCWAQALRRNALERALKIATLHPDDRAVIEAMGQQLLQETESTASA
CCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA