| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222526491
Identifier: 222526491
GI number: 222526491
Start: 4064169
End: 4064495
Strand: Direct
Name: 222526491
Synonym: Chy400_3258
Alternate gene names: NA
Gene position: 4064169-4064495 (Clockwise)
Preceding gene: 222526490
Following gene: 222526492
Centisome position: 77.13
GC content: 56.57
Gene sequence:
>327_bases ATGGCGGCCAACCCTAAGACCGCTACACCACGTCCACGGCACGTACCGAAGCGTATGTGCATTGTTTGTCGCCAGAGTGA TGCCAAACGTGCATTGATTCGGCTGGTACGCAATGCTGATGGGCGCGTGGTGATCGATCCGACCGGGAAGCAACCCGGAC GAGGTGCGTATCTGTGTCGCAATCCATTATGTTGGGCGCAGGCGTTGCGTCGCAATGCTCTCGAACGGGCATTGAAGATT GCGACACTGCATCCAGATGATCGGGCAGTCATCGAAGCAATGGGGCAACAGTTGCTTCAGGAAACGGAGTCAACGGCGTC TGCGTAA
Upstream 100 bases:
>100_bases GCGACCTCGCAGAAGATTTTTATCTATTACAATGACCGCCTGTTCGCTTCCTACATTTTGCTGGAAGGTGGACAGGTAGT GCCCGATGAGGAGTAAGGTC
Downstream 100 bases:
>100_bases ACGCTTTTGCACGCATCGAAGAATTCAGAGGCTCGTCTGCGTGTGATTGGCTAGTCTGTAAGAGACAACTGCTCTAAGCG CCGTTGACGTACACGTGCCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 108; Mature: 107
Protein sequence:
>108_residues MAANPKTATPRPRHVPKRMCIVCRQSDAKRALIRLVRNADGRVVIDPTGKQPGRGAYLCRNPLCWAQALRRNALERALKI ATLHPDDRAVIEAMGQQLLQETESTASA
Sequences:
>Translated_108_residues MAANPKTATPRPRHVPKRMCIVCRQSDAKRALIRLVRNADGRVVIDPTGKQPGRGAYLCRNPLCWAQALRRNALERALKI ATLHPDDRAVIEAMGQQLLQETESTASA >Mature_107_residues AANPKTATPRPRHVPKRMCIVCRQSDAKRALIRLVRNADGRVVIDPTGKQPGRGAYLCRNPLCWAQALRRNALERALKIA TLHPDDRAVIEAMGQQLLQETESTASA
Specific function: Unknown
COG id: COG2740
COG function: function code K; Predicted nucleic-acid-binding protein implicated in transcription termination
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11952; Mature: 11821
Theoretical pI: Translated: 11.16; Mature: 11.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.7 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 3.7 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAANPKTATPRPRHVPKRMCIVCRQSDAKRALIRLVRNADGRVVIDPTGKQPGRGAYLCR CCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCEEECCCCCCCCCCCEEEC NPLCWAQALRRNALERALKIATLHPDDRAVIEAMGQQLLQETESTASA CCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure AANPKTATPRPRHVPKRMCIVCRQSDAKRALIRLVRNADGRVVIDPTGKQPGRGAYLCR CCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCEEECCCCCCCCCCCEEEC NPLCWAQALRRNALERALKIATLHPDDRAVIEAMGQQLLQETESTASA CCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA