| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222526480
Identifier: 222526480
GI number: 222526480
Start: 4048930
End: 4049490
Strand: Direct
Name: 222526480
Synonym: Chy400_3247
Alternate gene names: NA
Gene position: 4048930-4049490 (Clockwise)
Preceding gene: 222526477
Following gene: 222526481
Centisome position: 76.85
GC content: 54.37
Gene sequence:
>561_bases ATGCCACTCAAAAACTTTGCCGTTGTAAATCACCCGGCGCGCATGCGCATCTTTCAGGCGCTTACCGGGGTTGAACTCTC CATCAATCAATTATCACGTGTCCTACCCGACATCCCTAAACCGTCGCTGTACCGACACGTACACAAAATGCTGGAAGCAG GCGTGGTGCGCGTTGCCCGTACACGCCACATTCACGGGATCGAAGAGCGCTTCTTCATCGCCGAGGAAGGCTTGATTGAC CCGGCAGATGTTTTTCAGCCCGGCGGGTTAGAGCAGTTCGCCGACCATGTTCAGTTATACGGTTCGTCGGTAGCCCAAGA CCTGGCGAATTACGTGCTGGAGCGTGGCGAACCTGACCTGAATAACATCATTGCCCGGGAATACACGTTTTACGCAACAG AGGAAGAGTTCATGAAGGTACGTCAGGCAATCTGCGATCTGTTAGAGGAACTGCAAAAGAATCCCCCCGCTGCAGGACGC ACCAAACGTCGCATGTTTGTGATGGGCCATCCACTGCGAGCGGCACTACTGGCAGACCAGGCAAATTCGGACGCAGGGTA A
Upstream 100 bases:
>100_bases TTCTGGCAGCGGGCAGATAAAGGGTATTGCATGTTGGCATTCTTTATGTTATCGTTTTTGATAACGATGTTGAAGTTGAT ATATCAAAAAGGTTCTGCCT
Downstream 100 bases:
>100_bases GTCTTACTTCAGGAGGTTGCTATACCTGAACGGTAGGAGCATGGATGTCGTGCCCCTACCATTGATCGGTCAGCGTGATC TGGCAGGGGTATCGCATCGG
Product: regulatory protein, ArsR
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 186; Mature: 185
Protein sequence:
>186_residues MPLKNFAVVNHPARMRIFQALTGVELSINQLSRVLPDIPKPSLYRHVHKMLEAGVVRVARTRHIHGIEERFFIAEEGLID PADVFQPGGLEQFADHVQLYGSSVAQDLANYVLERGEPDLNNIIAREYTFYATEEEFMKVRQAICDLLEELQKNPPAAGR TKRRMFVMGHPLRAALLADQANSDAG
Sequences:
>Translated_186_residues MPLKNFAVVNHPARMRIFQALTGVELSINQLSRVLPDIPKPSLYRHVHKMLEAGVVRVARTRHIHGIEERFFIAEEGLID PADVFQPGGLEQFADHVQLYGSSVAQDLANYVLERGEPDLNNIIAREYTFYATEEEFMKVRQAICDLLEELQKNPPAAGR TKRRMFVMGHPLRAALLADQANSDAG >Mature_185_residues PLKNFAVVNHPARMRIFQALTGVELSINQLSRVLPDIPKPSLYRHVHKMLEAGVVRVARTRHIHGIEERFFIAEEGLIDP ADVFQPGGLEQFADHVQLYGSSVAQDLANYVLERGEPDLNNIIAREYTFYATEEEFMKVRQAICDLLEELQKNPPAAGRT KRRMFVMGHPLRAALLADQANSDAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20974; Mature: 20843
Theoretical pI: Translated: 6.63; Mature: 6.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLKNFAVVNHPARMRIFQALTGVELSINQLSRVLPDIPKPSLYRHVHKMLEAGVVRVAR CCCCCCEEECCHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH TRHIHGIEERFFIAEEGLIDPADVFQPGGLEQFADHVQLYGSSVAQDLANYVLERGEPDL HHHHCCHHHHHHHHCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH NNIIAREYTFYATEEEFMKVRQAICDLLEELQKNPPAAGRTKRRMFVMGHPLRAALLADQ HHHHHHHHHEEECHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCHHHHHHHHC ANSDAG CCCCCC >Mature Secondary Structure PLKNFAVVNHPARMRIFQALTGVELSINQLSRVLPDIPKPSLYRHVHKMLEAGVVRVAR CCCCCEEECCHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH TRHIHGIEERFFIAEEGLIDPADVFQPGGLEQFADHVQLYGSSVAQDLANYVLERGEPDL HHHHCCHHHHHHHHCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH NNIIAREYTFYATEEEFMKVRQAICDLLEELQKNPPAAGRTKRRMFVMGHPLRAALLADQ HHHHHHHHHEEECHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCHHHHHHHHC ANSDAG CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA