| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is yebA [C]
Identifier: 222526058
GI number: 222526058
Start: 3468767
End: 3471142
Strand: Direct
Name: yebA [C]
Synonym: Chy400_2815
Alternate gene names: 222526058
Gene position: 3468767-3471142 (Clockwise)
Preceding gene: 222526057
Following gene: 222526059
Centisome position: 65.83
GC content: 57.41
Gene sequence:
>2376_bases ATGCATCGCTTCGCCTCCTGGCTGCTCATCGTGAGCTTCGTTGTTATCGCCAATCCGGTCCACGCCCAGCCGACCGGTGG ATGGAGCGTGGCTGAGTTTCTCGCCCGGCAGCCCGGCCCCTTGAAAGAACTCGATGTTGACGGGAAACCTGCGGCCCAGA TTATCGAAGAGCAGAGCATTTACTTCGGCGTCAGTCCATTCCTTACCCTGGCCCTGCTCGAAGCAACAGCGGGTCTAATC AGCGATCCTGCTCCGCCAGCAACCGCCTTGAGTCACCCCTTCGGCCTGCACGGCCCTACCGGTTTCGCCGAACAGATCAC ATGGGTTAACCGGGAATTACGGGCTGGATTGGGACCGTATCAGCAACCGCCAACCATTCGATTACAAGATGGGTTGACAC TCACCATCTCACTTGATGAGCCGGCTGAGTGGATTGCCATGAAGCGATTTCTGGCTCAGGGCCGTGATTCGGTGACATGG CTGGCAGCAGTGAAAGCAACCGCAGCGGCACTTCGTACCTATTTCGATGGTCAGCTCGCGCCACCTGTCGTGGTGACGAC CGATGTTACCGGTTGGTTACGGGCGCCATGGCCGATGGGTACGCGGGTCAACCATCTTGCCTACTTCGATCATCTTTACC CAATGGTCGATACCGGGGGTGATGGCAACAATGAAATGGTTGACTATCTTGGCCGGCGAAACGTGCAATACAATAGCCAC GATGGTCATGATTATGTTTTCCCGGATGCACCGTTCTCCACTCCGATCCTTGCTGCCGCAAGTGGTACGGCGTATGCGTT TCGTGAGTCACGGGGTCTTGGCGTTGTCATTGTTCATCCCAACGGCTACGAGACCGTCTACTGGCATTTGAGTGCATTTG CACCCATCTTCAACGAGGGCAATGGGGTGCGCGTTGCAACCGGTCAGCAGATTGGTGTGAGCGGTGCCAGTGGGGTGAGC GGAACTCCGCATCTGCACTTTGAAGTCCGGCGCTGGGAAGGGGGTATTCGCAAACAGGTTGATCCGTATGGCTGGTTCGG CCCCGGCCCCGATCCCTGCCCGGCCTACGCCGGTTGTGCAGCCAGTACCTGGCTCTGGCATCCTGATCTAATCGGCACCT ACGATTTCACACCGCCTGATTACATGCCACCAGTGTCTGACACCACACCGCCAATTGGTACGATGCGTGTCGCACCGCCC GACCATCTCCGCCTTGCCGTGAGTTTCGATGGGCATGCGCTCCAGACAGTTGGTCAGAGCATCCCATACCTCAGTGGCAA TCCACGCTTTACCGGCGGTCGCTTCGGTCAGGCAATGGTGAGCGACAACGCCATCGTTGCCTTACCCACGACCGGCAACC TCGATCTTGAACGAGGAACCATAAGTTTATGGGTTGAGATACCGACCACCTTCCCCGGCAATAGCCTTAATCGCCACTAT CTGTTTGCGACGAGTGCCGAACCGGAAGGGGTGCCTGTCTATACTGGAACCCTGGCCCTGCGCCGGGATCGGTCTGGAAC CGATAGTCGTGCGCAGTGGACGTTCTGGACGGTGGGTGATGCCACCAGCGGCGAAGACCTGCTGAGCGTACCGGATACGT TGAGTGCCGGCTGGCACCATTTTGCGGTGATCTGGGATGCTGCGAATGGGTATAAAGCCCTCTACATCGATGGCGTGTTG GTTGCCGAGCGGAATAACGCCGTCTTACCGTATCTTCCTGGTGCGCTGCTGTATATCGGACGCTTTAGCGCCGGTAGTCC CGCTGCCGGCGTGGCAATTGACGACCTGGCGATCTTTGCTAATCCCTTATCACCAGCCGAAATTGCTGTTCTTGCCACAG CACCAGCCCTGTCCCCCGATCCGGTCGTTGTCAATGAACCCACAATCCGCATTGACACCAATGCTATGGACGACAACGGT GGCATTGTTGCGGTGACGTTGAGCATTAACGGTGAGCAGAGCGATCCGTTACCGTATTACGACAGCTATCGCTGGAGTTT ACCGTCAGTTGAAGGCGATCATGTGGTAGAGGTGTCCTACGTTGATCGAGCGGGAAACACGACTGTTGTATCGCAGACAG TAACGCTCAATCTGCCACCACGTGCCGGCATCCAGACTGAGTGGCTCGAAACTGACACTGTGCGATTGCGCTTCGATTCC CACGATCAAGATACACCACTGGATGTACAACTGAGTACCACCCCCGATTTCGCCACGGCAGCCTGGCTACCGCTGGTACC GGAAATCCGCTGGCGATGGGAGGCTGGCGAAACCCGCCAGCTCTTCGTCCGTGTGCGTGATGCAACAGGACTGGTTAGTG AGCCGATGGCTGTCCCGCTGTGGCATCAGGTCTTTGTGCCGTTGATGCAGCGGTGA
Upstream 100 bases:
>100_bases ATTCAAACCTTAGCACTTTGTCATCCAGGAAACCTTTGCCTCACAATGACGTTATGGTAGTATAGGTACAACATCGAACC ATTGCTGCATACGGTCACTT
Downstream 100 bases:
>100_bases TTGCGTTGCCTGCCAGCACCGGCAATAAGCTCTACTGCCGAAGCTGTTGGGAATGAAACCCTACCATCGGCGTGCTGGAT CATTCCGTTACACACAATTG
Product: peptidase M23
Products: NA
Alternate protein names: Peptidase M; M23B Family Peptidase
Number of amino acids: Translated: 791; Mature: 791
Protein sequence:
>791_residues MHRFASWLLIVSFVVIANPVHAQPTGGWSVAEFLARQPGPLKELDVDGKPAAQIIEEQSIYFGVSPFLTLALLEATAGLI SDPAPPATALSHPFGLHGPTGFAEQITWVNRELRAGLGPYQQPPTIRLQDGLTLTISLDEPAEWIAMKRFLAQGRDSVTW LAAVKATAAALRTYFDGQLAPPVVVTTDVTGWLRAPWPMGTRVNHLAYFDHLYPMVDTGGDGNNEMVDYLGRRNVQYNSH DGHDYVFPDAPFSTPILAAASGTAYAFRESRGLGVVIVHPNGYETVYWHLSAFAPIFNEGNGVRVATGQQIGVSGASGVS GTPHLHFEVRRWEGGIRKQVDPYGWFGPGPDPCPAYAGCAASTWLWHPDLIGTYDFTPPDYMPPVSDTTPPIGTMRVAPP DHLRLAVSFDGHALQTVGQSIPYLSGNPRFTGGRFGQAMVSDNAIVALPTTGNLDLERGTISLWVEIPTTFPGNSLNRHY LFATSAEPEGVPVYTGTLALRRDRSGTDSRAQWTFWTVGDATSGEDLLSVPDTLSAGWHHFAVIWDAANGYKALYIDGVL VAERNNAVLPYLPGALLYIGRFSAGSPAAGVAIDDLAIFANPLSPAEIAVLATAPALSPDPVVVNEPTIRIDTNAMDDNG GIVAVTLSINGEQSDPLPYYDSYRWSLPSVEGDHVVEVSYVDRAGNTTVVSQTVTLNLPPRAGIQTEWLETDTVRLRFDS HDQDTPLDVQLSTTPDFATAAWLPLVPEIRWRWEAGETRQLFVRVRDATGLVSEPMAVPLWHQVFVPLMQR
Sequences:
>Translated_791_residues MHRFASWLLIVSFVVIANPVHAQPTGGWSVAEFLARQPGPLKELDVDGKPAAQIIEEQSIYFGVSPFLTLALLEATAGLI SDPAPPATALSHPFGLHGPTGFAEQITWVNRELRAGLGPYQQPPTIRLQDGLTLTISLDEPAEWIAMKRFLAQGRDSVTW LAAVKATAAALRTYFDGQLAPPVVVTTDVTGWLRAPWPMGTRVNHLAYFDHLYPMVDTGGDGNNEMVDYLGRRNVQYNSH DGHDYVFPDAPFSTPILAAASGTAYAFRESRGLGVVIVHPNGYETVYWHLSAFAPIFNEGNGVRVATGQQIGVSGASGVS GTPHLHFEVRRWEGGIRKQVDPYGWFGPGPDPCPAYAGCAASTWLWHPDLIGTYDFTPPDYMPPVSDTTPPIGTMRVAPP DHLRLAVSFDGHALQTVGQSIPYLSGNPRFTGGRFGQAMVSDNAIVALPTTGNLDLERGTISLWVEIPTTFPGNSLNRHY LFATSAEPEGVPVYTGTLALRRDRSGTDSRAQWTFWTVGDATSGEDLLSVPDTLSAGWHHFAVIWDAANGYKALYIDGVL VAERNNAVLPYLPGALLYIGRFSAGSPAAGVAIDDLAIFANPLSPAEIAVLATAPALSPDPVVVNEPTIRIDTNAMDDNG GIVAVTLSINGEQSDPLPYYDSYRWSLPSVEGDHVVEVSYVDRAGNTTVVSQTVTLNLPPRAGIQTEWLETDTVRLRFDS HDQDTPLDVQLSTTPDFATAAWLPLVPEIRWRWEAGETRQLFVRVRDATGLVSEPMAVPLWHQVFVPLMQR >Mature_791_residues MHRFASWLLIVSFVVIANPVHAQPTGGWSVAEFLARQPGPLKELDVDGKPAAQIIEEQSIYFGVSPFLTLALLEATAGLI SDPAPPATALSHPFGLHGPTGFAEQITWVNRELRAGLGPYQQPPTIRLQDGLTLTISLDEPAEWIAMKRFLAQGRDSVTW LAAVKATAAALRTYFDGQLAPPVVVTTDVTGWLRAPWPMGTRVNHLAYFDHLYPMVDTGGDGNNEMVDYLGRRNVQYNSH DGHDYVFPDAPFSTPILAAASGTAYAFRESRGLGVVIVHPNGYETVYWHLSAFAPIFNEGNGVRVATGQQIGVSGASGVS GTPHLHFEVRRWEGGIRKQVDPYGWFGPGPDPCPAYAGCAASTWLWHPDLIGTYDFTPPDYMPPVSDTTPPIGTMRVAPP DHLRLAVSFDGHALQTVGQSIPYLSGNPRFTGGRFGQAMVSDNAIVALPTTGNLDLERGTISLWVEIPTTFPGNSLNRHY LFATSAEPEGVPVYTGTLALRRDRSGTDSRAQWTFWTVGDATSGEDLLSVPDTLSAGWHHFAVIWDAANGYKALYIDGVL VAERNNAVLPYLPGALLYIGRFSAGSPAAGVAIDDLAIFANPLSPAEIAVLATAPALSPDPVVVNEPTIRIDTNAMDDNG GIVAVTLSINGEQSDPLPYYDSYRWSLPSVEGDHVVEVSYVDRAGNTTVVSQTVTLNLPPRAGIQTEWLETDTVRLRFDS HDQDTPLDVQLSTTPDFATAAWLPLVPEIRWRWEAGETRQLFVRVRDATGLVSEPMAVPLWHQVFVPLMQR
Specific function: Could Be Involved In Cell Wall Degradation Or Formation. [C]
COG id: COG0739
COG function: function code M; Membrane proteins related to metalloendopeptidases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.4.24.- [C]
Molecular weight: Translated: 85922; Mature: 85922
Theoretical pI: Translated: 4.73; Mature: 4.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHRFASWLLIVSFVVIANPVHAQPTGGWSVAEFLARQPGPLKELDVDGKPAAQIIEEQSI CCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCE YFGVSPFLTLALLEATAGLISDPAPPATALSHPFGLHGPTGFAEQITWVNRELRAGLGPY EEECHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCC QQPPTIRLQDGLTLTISLDEPAEWIAMKRFLAQGRDSVTWLAAVKATAAALRTYFDGQLA CCCCEEEEECCEEEEEECCCCHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHCCCCCC PPVVVTTDVTGWLRAPWPMGTRVNHLAYFDHLYPMVDTGGDGNNEMVDYLGRRNVQYNSH CCEEEEECCCCEEECCCCCCCCCHHHHHHHHHCCEEECCCCCCHHHHHHHHCCCCEECCC DGHDYVFPDAPFSTPILAAASGTAYAFRESRGLGVVIVHPNGYETVYWHLSAFAPIFNEG CCCEEECCCCCCCCCEEEECCCCEEEEECCCCCEEEEECCCCCEEEEEEEEHHCHHHCCC NGVRVATGQQIGVSGASGVSGTPHLHFEVRRWEGGIRKQVDPYGWFGPGPDPCPAYAGCA CEEEEECCCEECCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC ASTWLWHPDLIGTYDFTPPDYMPPVSDTTPPIGTMRVAPPDHLRLAVSFDGHALQTVGQS CCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEEEEECCHHHHHHHCC IPYLSGNPRFTGGRFGQAMVSDNAIVALPTTGNLDLERGTISLWVEIPTTFPGNSLNRHY CCCCCCCCCCCCCCCCCEEECCCEEEEECCCCCCEEECCEEEEEEEECCCCCCCCCCCEE LFATSAEPEGVPVYTGTLALRRDRSGTDSRAQWTFWTVGDATSGEDLLSVPDTLSAGWHH EEEECCCCCCCEEEEEEEEEEECCCCCCCCCEEEEEEECCCCCCCCCCCCCCHHCCCCEE FAVIWDAANGYKALYIDGVLVAERNNAVLPYLPGALLYIGRFSAGSPAAGVAIDDLAIFA EEEEEECCCCEEEEEEEEEEEECCCCEEECCCCCEEEEEEECCCCCCCCCEEEECEEEEE NPLSPAEIAVLATAPALSPDPVVVNEPTIRIDTNAMDDNGGIVAVTLSINGEQSDPLPYY CCCCCCEEEEEEECCCCCCCCEEECCCEEEEECCCCCCCCCEEEEEEEECCCCCCCCCCC DSYRWSLPSVEGDHVVEVSYVDRAGNTTVVSQTVTLNLPPRAGIQTEWLETDTVRLRFDS CCCEEECCCCCCCCEEEEEEECCCCCEEEEEEEEEEECCCCCCCEEEEECCCEEEEEECC HDQDTPLDVQLSTTPDFATAAWLPLVPEIRWRWEAGETRQLFVRVRDATGLVSEPMAVPL CCCCCCEEEEEECCCCHHHHHHCCCCCCEEEEECCCCCEEEEEEEECCCCCCCCCCCCCH WHQVFVPLMQR HHHHHHHHHCC >Mature Secondary Structure MHRFASWLLIVSFVVIANPVHAQPTGGWSVAEFLARQPGPLKELDVDGKPAAQIIEEQSI CCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCE YFGVSPFLTLALLEATAGLISDPAPPATALSHPFGLHGPTGFAEQITWVNRELRAGLGPY EEECHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCC QQPPTIRLQDGLTLTISLDEPAEWIAMKRFLAQGRDSVTWLAAVKATAAALRTYFDGQLA CCCCEEEEECCEEEEEECCCCHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHCCCCCC PPVVVTTDVTGWLRAPWPMGTRVNHLAYFDHLYPMVDTGGDGNNEMVDYLGRRNVQYNSH CCEEEEECCCCEEECCCCCCCCCHHHHHHHHHCCEEECCCCCCHHHHHHHHCCCCEECCC DGHDYVFPDAPFSTPILAAASGTAYAFRESRGLGVVIVHPNGYETVYWHLSAFAPIFNEG CCCEEECCCCCCCCCEEEECCCCEEEEECCCCCEEEEECCCCCEEEEEEEEHHCHHHCCC NGVRVATGQQIGVSGASGVSGTPHLHFEVRRWEGGIRKQVDPYGWFGPGPDPCPAYAGCA CEEEEECCCEECCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC ASTWLWHPDLIGTYDFTPPDYMPPVSDTTPPIGTMRVAPPDHLRLAVSFDGHALQTVGQS CCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEEEEECCHHHHHHHCC IPYLSGNPRFTGGRFGQAMVSDNAIVALPTTGNLDLERGTISLWVEIPTTFPGNSLNRHY CCCCCCCCCCCCCCCCCEEECCCEEEEECCCCCCEEECCEEEEEEEECCCCCCCCCCCEE LFATSAEPEGVPVYTGTLALRRDRSGTDSRAQWTFWTVGDATSGEDLLSVPDTLSAGWHH EEEECCCCCCCEEEEEEEEEEECCCCCCCCCEEEEEEECCCCCCCCCCCCCCHHCCCCEE FAVIWDAANGYKALYIDGVLVAERNNAVLPYLPGALLYIGRFSAGSPAAGVAIDDLAIFA EEEEEECCCCEEEEEEEEEEEECCCCEEECCCCCEEEEEEECCCCCCCCCEEEECEEEEE NPLSPAEIAVLATAPALSPDPVVVNEPTIRIDTNAMDDNGGIVAVTLSINGEQSDPLPYY CCCCCCEEEEEEECCCCCCCCEEECCCEEEEECCCCCCCCCEEEEEEEECCCCCCCCCCC DSYRWSLPSVEGDHVVEVSYVDRAGNTTVVSQTVTLNLPPRAGIQTEWLETDTVRLRFDS CCCEEECCCCCCCCEEEEEEECCCCCEEEEEEEEEEECCCCCCCEEEEECCCEEEEEECC HDQDTPLDVQLSTTPDFATAAWLPLVPEIRWRWEAGETRQLFVRVRDATGLVSEPMAVPL CCCCCCEEEEEECCCCHHHHHHCCCCCCEEEEECCCCCEEEEEEEECCCCCCCCCCCCCH WHQVFVPLMQR HHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA