Definition Chloroflexus sp. Y-400-fl chromosome, complete genome.
Accession NC_012032
Length 5,268,950

Click here to switch to the map view.

The map label for this gene is 222526006

Identifier: 222526006

GI number: 222526006

Start: 3406911

End: 3407036

Strand: Direct

Name: 222526006

Synonym: Chy400_2762

Alternate gene names: NA

Gene position: 3406911-3407036 (Clockwise)

Preceding gene: 222526000

Following gene: 222526007

Centisome position: 64.66

GC content: 57.94

Gene sequence:

>126_bases
TTGGGGGCGATCTGGAATATCCAAACCCGCACGGCGGGAGAGGTCAACCAGCGGGCTGTGCCAGGGTGGCTTGGTGCAGT
AGAAGTTGCGTTAGCTCGTATTTTCTTTCCACCCCTGAGCTGCTGA

Upstream 100 bases:

>100_bases
AGTATAGAGCCTAGTGATGTCTTGGGTGTCCTCAGCTCCGACTCCTCGCTCGTGTATCTTCGGGATCGGACAGCATGCGA
GTGTACGCAGGAGATAGGGC

Downstream 100 bases:

>100_bases
AGGGAGGTGATGTTTGCATATCAAGCAGAGTATCATTCCACTGAACGCACTTGCATCAGAGGAATGTCTAAGCACTGCCT
GCATTACCGAACCAGTGCTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 41; Mature: 40

Protein sequence:

>41_residues
MGAIWNIQTRTAGEVNQRAVPGWLGAVEVALARIFFPPLSC

Sequences:

>Translated_41_residues
MGAIWNIQTRTAGEVNQRAVPGWLGAVEVALARIFFPPLSC
>Mature_40_residues
GAIWNIQTRTAGEVNQRAVPGWLGAVEVALARIFFPPLSC

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 4441; Mature: 4310

Theoretical pI: Translated: 8.55; Mature: 8.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGAIWNIQTRTAGEVNQRAVPGWLGAVEVALARIFFPPLSC
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
GAIWNIQTRTAGEVNQRAVPGWLGAVEVALARIFFPPLSC
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA