| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is pgl [H]
Identifier: 222525997
GI number: 222525997
Start: 3397476
End: 3398225
Strand: Direct
Name: pgl [H]
Synonym: Chy400_2753
Alternate gene names: 222525997
Gene position: 3397476-3398225 (Clockwise)
Preceding gene: 222525996
Following gene: 222525999
Centisome position: 64.48
GC content: 56.93
Gene sequence:
>750_bases ATGAATGAACAGCAATCGATTCGGGTCTACGAGCACGCCGATGAGCTGTACCGGATGGCAGCGACATTTGTTGCTGAGCA GATTCGATCCGCAATTGATAATCGTGGGCAGGCGTTAATTGCGCTTTCGGGAGGAAGCCTGACCTCGCGCCTGTATCCAT TGCTCGCGAATGCACCGTTGCGCGAACAGATTGACTGGAGCAGGGTGAGTATCGTATTTGCCGATGAACGGTATGTACCG TTCGACGACAGCGAGAACAATTATCGTGCGACACGACAGACGTTTCTCGATCACGTACCGGTACATGCCGATCAGGTTTT TCCGGTGCCGACCTACTATCGTGATCCGCAACAGGCAGCCACCATTTATCAGCAGCAGTTAACAGCGTTGCTGACAGCGC ATGGCGGCCAGATTGACGTAGCATTGCTCGGCATGGGGCCGGATGGCCACACTGCATCGCTGTTTCCCCGGCATCCGGTT CTGACGGCAATTCCTGCCGGCGCATTGACTGTGGTTGTGGCCGATGCACCGAAACCACCACCACTGCGTCTGAGTTTAAC GCCAGCCGCATTGAATACGGCACGCGCAGTGGTATTTGTGGTCAGCGGTGCCGACAAGGCAGCAGCCGTGGCAGCCGCGC TGGCCGATACCGGTGACGCAATGGCACAACCAACGCGCCTGATTAATCCGGTAGCAGGGACGGTCTATTGGATGCTGGAT CGGGCAGCGGCAGAGAGGGTGACGCAGTAA
Upstream 100 bases:
>100_bases CCAGATCGGAGCGCAGTGGACGCGCAGGGAATATCTGGTTTCTCATTGCTACGCTTTCAACACCTGTTGATAGCGTACAG TACCAGTTCAGGACACATCC
Downstream 100 bases:
>100_bases CCACGTGCGTCAACTATTCACGATGCCCATGCTCCGTGCTTTGCAGTGGTGCGAACGCGGCAAAGTGATATGTCAGCAGC CACGCAGCGTATCTGTTCAC
Product: 6-phosphogluconolactonase
Products: NA
Alternate protein names: 6PGL [H]
Number of amino acids: Translated: 249; Mature: 249
Protein sequence:
>249_residues MNEQQSIRVYEHADELYRMAATFVAEQIRSAIDNRGQALIALSGGSLTSRLYPLLANAPLREQIDWSRVSIVFADERYVP FDDSENNYRATRQTFLDHVPVHADQVFPVPTYYRDPQQAATIYQQQLTALLTAHGGQIDVALLGMGPDGHTASLFPRHPV LTAIPAGALTVVVADAPKPPPLRLSLTPAALNTARAVVFVVSGADKAAAVAAALADTGDAMAQPTRLINPVAGTVYWMLD RAAAERVTQ
Sequences:
>Translated_249_residues MNEQQSIRVYEHADELYRMAATFVAEQIRSAIDNRGQALIALSGGSLTSRLYPLLANAPLREQIDWSRVSIVFADERYVP FDDSENNYRATRQTFLDHVPVHADQVFPVPTYYRDPQQAATIYQQQLTALLTAHGGQIDVALLGMGPDGHTASLFPRHPV LTAIPAGALTVVVADAPKPPPLRLSLTPAALNTARAVVFVVSGADKAAAVAAALADTGDAMAQPTRLINPVAGTVYWMLD RAAAERVTQ >Mature_249_residues MNEQQSIRVYEHADELYRMAATFVAEQIRSAIDNRGQALIALSGGSLTSRLYPLLANAPLREQIDWSRVSIVFADERYVP FDDSENNYRATRQTFLDHVPVHADQVFPVPTYYRDPQQAATIYQQQLTALLTAHGGQIDVALLGMGPDGHTASLFPRHPV LTAIPAGALTVVVADAPKPPPLRLSLTPAALNTARAVVFVVSGADKAAAVAAALADTGDAMAQPTRLINPVAGTVYWMLD RAAAERVTQ
Specific function: Hydrolysis of 6-phosphogluconolactone to 6- phosphogluconate [H]
COG id: COG0363
COG function: function code G; 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glucosamine/galactosamine-6-phosphate isomerase family. 6-phosphogluconolactonase subfamily [H]
Homologues:
Organism=Homo sapiens, GI6912586, Length=249, Percent_Identity=35.3413654618474, Blast_Score=128, Evalue=5e-30, Organism=Homo sapiens, GI52145310, Length=233, Percent_Identity=30.9012875536481, Blast_Score=102, Evalue=4e-22, Organism=Caenorhabditis elegans, GI115533058, Length=213, Percent_Identity=31.924882629108, Blast_Score=112, Evalue=2e-25, Organism=Caenorhabditis elegans, GI115533060, Length=209, Percent_Identity=32.0574162679426, Blast_Score=110, Evalue=5e-25, Organism=Saccharomyces cerevisiae, GI6321957, Length=251, Percent_Identity=29.0836653386454, Blast_Score=108, Evalue=7e-25, Organism=Saccharomyces cerevisiae, GI6321687, Length=247, Percent_Identity=31.5789473684211, Blast_Score=106, Evalue=4e-24, Organism=Saccharomyces cerevisiae, GI6324362, Length=226, Percent_Identity=33.1858407079646, Blast_Score=102, Evalue=5e-23, Organism=Saccharomyces cerevisiae, GI6319918, Length=222, Percent_Identity=32.4324324324324, Blast_Score=97, Evalue=2e-21, Organism=Drosophila melanogaster, GI24641119, Length=208, Percent_Identity=34.1346153846154, Blast_Score=115, Evalue=2e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005900 - InterPro: IPR006148 [H]
Pfam domain/function: PF01182 Glucosamine_iso [H]
EC number: =3.1.1.31 [H]
Molecular weight: Translated: 26927; Mature: 26927
Theoretical pI: Translated: 5.93; Mature: 5.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNEQQSIRVYEHADELYRMAATFVAEQIRSAIDNRGQALIALSGGSLTSRLYPLLANAPL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHCCCCC REQIDWSRVSIVFADERYVPFDDSENNYRATRQTFLDHVPVHADQVFPVPTYYRDPQQAA HHCCCCEEEEEEEECCEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHH TIYQQQLTALLTAHGGQIDVALLGMGPDGHTASLFPRHPVLTAIPAGALTVVVADAPKPP HHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCCCCCCEEECCCEEEEEEECCCCCC PLRLSLTPAALNTARAVVFVVSGADKAAAVAAALADTGDAMAQPTRLINPVAGTVYWMLD CEEEEECHHHHCCCEEEEEEEECCCHHHHHHHHHHCCCHHHHCCHHHHCHHHHHHHHHHH RAAAERVTQ HHHHHHCCC >Mature Secondary Structure MNEQQSIRVYEHADELYRMAATFVAEQIRSAIDNRGQALIALSGGSLTSRLYPLLANAPL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHCCCCC REQIDWSRVSIVFADERYVPFDDSENNYRATRQTFLDHVPVHADQVFPVPTYYRDPQQAA HHCCCCEEEEEEEECCEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHH TIYQQQLTALLTAHGGQIDVALLGMGPDGHTASLFPRHPVLTAIPAGALTVVVADAPKPP HHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCCCCCCEEECCCEEEEEEECCCCCC PLRLSLTPAALNTARAVVFVVSGADKAAAVAAALADTGDAMAQPTRLINPVAGTVYWMLD CEEEEECHHHHCCCEEEEEEEECCCHHHHHHHHHHCCCHHHHCCHHHHCHHHHHHHHHHH RAAAERVTQ HHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905231; 9298645 [H]