| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222525987
Identifier: 222525987
GI number: 222525987
Start: 3381028
End: 3381759
Strand: Direct
Name: 222525987
Synonym: Chy400_2743
Alternate gene names: NA
Gene position: 3381028-3381759 (Clockwise)
Preceding gene: 222525984
Following gene: 222525988
Centisome position: 64.17
GC content: 54.64
Gene sequence:
>732_bases TTGGCAACGCTCGGACGCAATGTCACGATCACACTGATCGGTCATGGCACCTTCCATCTAACCACACCGGAAGGTCGCAA CATCTTGATTGATGCCTGGGTTGATGGAAACCCGGTCTGTCCAGAGCCATGGAAAGCGCGTGTGCGCGAGAATCTGGCTG CCATCTTCGTTACCCACGGCCATTTCGACCATATTGCCGATCTGGTTGATCTGGCCCGTGAAACCGGGGCAACGGTTGTG TGTCAGTACGATATGGTTCCGTACCTGGAAGGCGAAGGTATTCCGGCAGCGCAGTTAGTTGGCTTCAACAAAGGTGGCAC GGTTACTGTAGCCGATGTACGGGCAACGATGACGACCGCTCACCATTCGAGTACCATTTACGAGAATGGCCAGATCATCA ATCTGGGAACGGCTGCCGGTTATGTATTGCGCTTTAGCAACGGCTTTACGGTCTACCACACTGGCGATACCTGTGTCACG ATGGATATGCAGATCATCGGTGAGCTGTATCGCCCCGATCTGGTGATCCTGCCTATCGGTGACCACTTTACAATGGATCC CCGACAGGCGGCATACGCACTGAAGCTAATCGGAGCGAAATACGCGATTCCTGAGCATTACGGTACCTTCCCCATCTTAA CCGGTACCCCGGAGGCGTTGATCGAGCATTGCCGTGAATTTGGGGTGACGACCGAGGTGATCGCGCTGAAGCCCGGCGAG TCGGTCAGTTAA
Upstream 100 bases:
>100_bases TATGTTATACTGAAAACGTCATCAGCACAACACTATTCGGTTTCCTATCAGACTATCTGGCCTGCGAAGTGCTCATATTT TGTGAGGGAAGGAGGCAACC
Downstream 100 bases:
>100_bases GCAGTCAGTAATAACGGTTTGTCTGGTGCACCTGGCCTGCTCCTCAAGACGATGATGCTGAGGGCAGGGTGGTGCACACT TTACTTGTGAACAGGTGTTG
Product: beta-lactamase domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 243; Mature: 242
Protein sequence:
>243_residues MATLGRNVTITLIGHGTFHLTTPEGRNILIDAWVDGNPVCPEPWKARVRENLAAIFVTHGHFDHIADLVDLARETGATVV CQYDMVPYLEGEGIPAAQLVGFNKGGTVTVADVRATMTTAHHSSTIYENGQIINLGTAAGYVLRFSNGFTVYHTGDTCVT MDMQIIGELYRPDLVILPIGDHFTMDPRQAAYALKLIGAKYAIPEHYGTFPILTGTPEALIEHCREFGVTTEVIALKPGE SVS
Sequences:
>Translated_243_residues MATLGRNVTITLIGHGTFHLTTPEGRNILIDAWVDGNPVCPEPWKARVRENLAAIFVTHGHFDHIADLVDLARETGATVV CQYDMVPYLEGEGIPAAQLVGFNKGGTVTVADVRATMTTAHHSSTIYENGQIINLGTAAGYVLRFSNGFTVYHTGDTCVT MDMQIIGELYRPDLVILPIGDHFTMDPRQAAYALKLIGAKYAIPEHYGTFPILTGTPEALIEHCREFGVTTEVIALKPGE SVS >Mature_242_residues ATLGRNVTITLIGHGTFHLTTPEGRNILIDAWVDGNPVCPEPWKARVRENLAAIFVTHGHFDHIADLVDLARETGATVVC QYDMVPYLEGEGIPAAQLVGFNKGGTVTVADVRATMTTAHHSSTIYENGQIINLGTAAGYVLRFSNGFTVYHTGDTCVTM DMQIIGELYRPDLVILPIGDHFTMDPRQAAYALKLIGAKYAIPEHYGTFPILTGTPEALIEHCREFGVTTEVIALKPGES VS
Specific function: Unknown
COG id: COG2220
COG function: function code R; Predicted Zn-dependent hydrolases of the beta-lactamase fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0173 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y2542_CHLAA (A9WI57)
Other databases:
- EMBL: CP000909 - RefSeq: YP_001636137.1 - ProteinModelPortal: A9WI57 - GeneID: 5827010 - GenomeReviews: CP000909_GR - KEGG: cau:Caur_2542 - HOGENOM: HBG741314 - OMA: FPIIDQT - ProtClustDB: CLSK975073 - HAMAP: MF_00457 - InterPro: IPR001279 - InterPro: IPR022877 - SMART: SM00849
Pfam domain/function: PF00753 Lactamase_B
EC number: NA
Molecular weight: Translated: 26379; Mature: 26248
Theoretical pI: Translated: 5.46; Mature: 5.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATLGRNVTITLIGHGTFHLTTPEGRNILIDAWVDGNPVCPEPWKARVRENLAAIFVTHG CCCCCCCEEEEEEECCEEEEECCCCCEEEEEEEECCCCCCCCHHHHHHHCCEEEEEEECC HFDHIADLVDLARETGATVVCQYDMVPYLEGEGIPAAQLVGFNKGGTVTVADVRATMTTA CHHHHHHHHHHHHHCCCEEEEEECCCCEECCCCCCHHHEEEECCCCEEEEEEEEEEEEEC HHSSTIYENGQIINLGTAAGYVLRFSNGFTVYHTGDTCVTMDMQIIGELYRPDLVILPIG CCCCEEECCCEEEEEECCCEEEEEECCCEEEEECCCEEEEEEHHHHHHHHCCCEEEEECC DHFTMDPRQAAYALKLIGAKYAIPEHYGTFPILTGTPEALIEHCREFGVTTEVIALKPGE CCCCCCHHHHHHEEEECCCEEECCCCCCCEEEEECCHHHHHHHHHHHCCEEEEEEECCCC SVS CCC >Mature Secondary Structure ATLGRNVTITLIGHGTFHLTTPEGRNILIDAWVDGNPVCPEPWKARVRENLAAIFVTHG CCCCCCEEEEEEECCEEEEECCCCCEEEEEEEECCCCCCCCHHHHHHHCCEEEEEEECC HFDHIADLVDLARETGATVVCQYDMVPYLEGEGIPAAQLVGFNKGGTVTVADVRATMTTA CHHHHHHHHHHHHHCCCEEEEEECCCCEECCCCCCHHHEEEECCCCEEEEEEEEEEEEEC HHSSTIYENGQIINLGTAAGYVLRFSNGFTVYHTGDTCVTMDMQIIGELYRPDLVILPIG CCCCEEECCCEEEEEECCCEEEEEECCCEEEEECCCEEEEEEHHHHHHHHCCCEEEEECC DHFTMDPRQAAYALKLIGAKYAIPEHYGTFPILTGTPEALIEHCREFGVTTEVIALKPGE CCCCCCHHHHHHEEEECCCEEECCCCCCCEEEEECCHHHHHHHHHHHCCEEEEEEECCCC SVS CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA