Definition Chloroflexus sp. Y-400-fl chromosome, complete genome.
Accession NC_012032
Length 5,268,950

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The map label for this gene is 222525987

Identifier: 222525987

GI number: 222525987

Start: 3381028

End: 3381759

Strand: Direct

Name: 222525987

Synonym: Chy400_2743

Alternate gene names: NA

Gene position: 3381028-3381759 (Clockwise)

Preceding gene: 222525984

Following gene: 222525988

Centisome position: 64.17

GC content: 54.64

Gene sequence:

>732_bases
TTGGCAACGCTCGGACGCAATGTCACGATCACACTGATCGGTCATGGCACCTTCCATCTAACCACACCGGAAGGTCGCAA
CATCTTGATTGATGCCTGGGTTGATGGAAACCCGGTCTGTCCAGAGCCATGGAAAGCGCGTGTGCGCGAGAATCTGGCTG
CCATCTTCGTTACCCACGGCCATTTCGACCATATTGCCGATCTGGTTGATCTGGCCCGTGAAACCGGGGCAACGGTTGTG
TGTCAGTACGATATGGTTCCGTACCTGGAAGGCGAAGGTATTCCGGCAGCGCAGTTAGTTGGCTTCAACAAAGGTGGCAC
GGTTACTGTAGCCGATGTACGGGCAACGATGACGACCGCTCACCATTCGAGTACCATTTACGAGAATGGCCAGATCATCA
ATCTGGGAACGGCTGCCGGTTATGTATTGCGCTTTAGCAACGGCTTTACGGTCTACCACACTGGCGATACCTGTGTCACG
ATGGATATGCAGATCATCGGTGAGCTGTATCGCCCCGATCTGGTGATCCTGCCTATCGGTGACCACTTTACAATGGATCC
CCGACAGGCGGCATACGCACTGAAGCTAATCGGAGCGAAATACGCGATTCCTGAGCATTACGGTACCTTCCCCATCTTAA
CCGGTACCCCGGAGGCGTTGATCGAGCATTGCCGTGAATTTGGGGTGACGACCGAGGTGATCGCGCTGAAGCCCGGCGAG
TCGGTCAGTTAA

Upstream 100 bases:

>100_bases
TATGTTATACTGAAAACGTCATCAGCACAACACTATTCGGTTTCCTATCAGACTATCTGGCCTGCGAAGTGCTCATATTT
TGTGAGGGAAGGAGGCAACC

Downstream 100 bases:

>100_bases
GCAGTCAGTAATAACGGTTTGTCTGGTGCACCTGGCCTGCTCCTCAAGACGATGATGCTGAGGGCAGGGTGGTGCACACT
TTACTTGTGAACAGGTGTTG

Product: beta-lactamase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 243; Mature: 242

Protein sequence:

>243_residues
MATLGRNVTITLIGHGTFHLTTPEGRNILIDAWVDGNPVCPEPWKARVRENLAAIFVTHGHFDHIADLVDLARETGATVV
CQYDMVPYLEGEGIPAAQLVGFNKGGTVTVADVRATMTTAHHSSTIYENGQIINLGTAAGYVLRFSNGFTVYHTGDTCVT
MDMQIIGELYRPDLVILPIGDHFTMDPRQAAYALKLIGAKYAIPEHYGTFPILTGTPEALIEHCREFGVTTEVIALKPGE
SVS

Sequences:

>Translated_243_residues
MATLGRNVTITLIGHGTFHLTTPEGRNILIDAWVDGNPVCPEPWKARVRENLAAIFVTHGHFDHIADLVDLARETGATVV
CQYDMVPYLEGEGIPAAQLVGFNKGGTVTVADVRATMTTAHHSSTIYENGQIINLGTAAGYVLRFSNGFTVYHTGDTCVT
MDMQIIGELYRPDLVILPIGDHFTMDPRQAAYALKLIGAKYAIPEHYGTFPILTGTPEALIEHCREFGVTTEVIALKPGE
SVS
>Mature_242_residues
ATLGRNVTITLIGHGTFHLTTPEGRNILIDAWVDGNPVCPEPWKARVRENLAAIFVTHGHFDHIADLVDLARETGATVVC
QYDMVPYLEGEGIPAAQLVGFNKGGTVTVADVRATMTTAHHSSTIYENGQIINLGTAAGYVLRFSNGFTVYHTGDTCVTM
DMQIIGELYRPDLVILPIGDHFTMDPRQAAYALKLIGAKYAIPEHYGTFPILTGTPEALIEHCREFGVTTEVIALKPGES
VS

Specific function: Unknown

COG id: COG2220

COG function: function code R; Predicted Zn-dependent hydrolases of the beta-lactamase fold

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0173 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y2542_CHLAA (A9WI57)

Other databases:

- EMBL:   CP000909
- RefSeq:   YP_001636137.1
- ProteinModelPortal:   A9WI57
- GeneID:   5827010
- GenomeReviews:   CP000909_GR
- KEGG:   cau:Caur_2542
- HOGENOM:   HBG741314
- OMA:   FPIIDQT
- ProtClustDB:   CLSK975073
- HAMAP:   MF_00457
- InterPro:   IPR001279
- InterPro:   IPR022877
- SMART:   SM00849

Pfam domain/function: PF00753 Lactamase_B

EC number: NA

Molecular weight: Translated: 26379; Mature: 26248

Theoretical pI: Translated: 5.46; Mature: 5.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATLGRNVTITLIGHGTFHLTTPEGRNILIDAWVDGNPVCPEPWKARVRENLAAIFVTHG
CCCCCCCEEEEEEECCEEEEECCCCCEEEEEEEECCCCCCCCHHHHHHHCCEEEEEEECC
HFDHIADLVDLARETGATVVCQYDMVPYLEGEGIPAAQLVGFNKGGTVTVADVRATMTTA
CHHHHHHHHHHHHHCCCEEEEEECCCCEECCCCCCHHHEEEECCCCEEEEEEEEEEEEEC
HHSSTIYENGQIINLGTAAGYVLRFSNGFTVYHTGDTCVTMDMQIIGELYRPDLVILPIG
CCCCEEECCCEEEEEECCCEEEEEECCCEEEEECCCEEEEEEHHHHHHHHCCCEEEEECC
DHFTMDPRQAAYALKLIGAKYAIPEHYGTFPILTGTPEALIEHCREFGVTTEVIALKPGE
CCCCCCHHHHHHEEEECCCEEECCCCCCCEEEEECCHHHHHHHHHHHCCEEEEEEECCCC
SVS
CCC
>Mature Secondary Structure 
ATLGRNVTITLIGHGTFHLTTPEGRNILIDAWVDGNPVCPEPWKARVRENLAAIFVTHG
CCCCCCEEEEEEECCEEEEECCCCCEEEEEEEECCCCCCCCHHHHHHHCCEEEEEEECC
HFDHIADLVDLARETGATVVCQYDMVPYLEGEGIPAAQLVGFNKGGTVTVADVRATMTTA
CHHHHHHHHHHHHHCCCEEEEEECCCCEECCCCCCHHHEEEECCCCEEEEEEEEEEEEEC
HHSSTIYENGQIINLGTAAGYVLRFSNGFTVYHTGDTCVTMDMQIIGELYRPDLVILPIG
CCCCEEECCCEEEEEECCCEEEEEECCCEEEEECCCEEEEEEHHHHHHHHCCCEEEEECC
DHFTMDPRQAAYALKLIGAKYAIPEHYGTFPILTGTPEALIEHCREFGVTTEVIALKPGE
CCCCCCHHHHHHEEEECCCEEECCCCCCCEEEEECCHHHHHHHHHHHCCEEEEEEECCCC
SVS
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA