Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
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Accession | NC_012032 |
Length | 5,268,950 |
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The map label for this gene is 222525429
Identifier: 222525429
GI number: 222525429
Start: 2755548
End: 2756501
Strand: Direct
Name: 222525429
Synonym: Chy400_2174
Alternate gene names: NA
Gene position: 2755548-2756501 (Clockwise)
Preceding gene: 222525418
Following gene: 222525438
Centisome position: 52.3
GC content: 54.93
Gene sequence:
>954_bases ATGCATAAGCAGCGTTACTACCCAATTACTCTCCTTGTAGCGATACTGGTTGCGGCCAGCTCTATCCTTTTCCTCGATTA TCGCCTCTACGCTCAACCAGAGGCTCTGTCGTGTCCACGGCAGCAAACCGTTGTCCTTAGTGGTAGTAATGCGCCGCCAT TGCAGGGCCTGATTGTCCTGTTTGCCGGGCAAGTCGTTGGTGGTGGGTTTAGCGATCCTGCCGGTAACTGGCGTATCCCC CTGCGGGTTAACGAACCTCCCGGTATCTATCCGGTAGAGGTAAGGCTGCGGAGTAACCAGCAACTTCTGGCCAGTATGCT CTGTTACGTCGATGTCCCACTTCCCGCAACCGCAACCTCTCTCCCAACTGCAACCCCTCTCCCAACTGCAACCGCTATCG CACGCCCAACCACCGCTTTGCCGGCTATACCGACGGCTACGGCATCCGTGCCATCACCAACCAGGCCAACTGCTACACCA ACCACGCCGTTGATCGGCACACCGACGGCGACTGGTCAGGCAAATGGCACGCCAACAGCAACTGCCACAGCTTCGCCGAG GACACCAACTCCCACATCGGTGAGGACTCCGACAACAACCACCACCCCCGAACCGGCCGGTCTGGCAGTCACGATTGAGG TTTTTCCGTATGATCCAGATACATCCTCGCTGAACGATGAATATGTGAATCTGTATTCGCTAGAAGAGAACGATATCAGT ATTGCTGGCTGGCGGATTGTCAATATCTCGCGGCCTGAACGGCCGACTTTTGTCTTTCCCCCCTTTATTCTCTCACCAGA AGTTGATCTTTACGTCTTCACCGGTCCTGGAACCAATAATCTAAGTGTTGGTAATTTCTATTGGGGACGTGACGAGGCGG TTTGGCGCACCGGTGATATTGCACAATTGCTTGATGCGCAGGGGCGTCTGGTCAGTGCGTATCAGGTTCCCTGA
Upstream 100 bases:
>100_bases GTCGGGCGATTAGCTCAGTTGGTTAGAGCGCCACGTTGACATCGTGGAGGTCAGTGGTTCGAATCCACTATCGCCCACCA CATTCATTGTAACACGCCCC
Downstream 100 bases:
>100_bases TGGTAATCGCTTATGTACGAACATGGTGTGACAGTGAGCCTTGTCACACATCCGTGATGCTGGCAGGCATGCACGACAAA GCGATTGACCTCTACCTGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 317; Mature: 317
Protein sequence:
>317_residues MHKQRYYPITLLVAILVAASSILFLDYRLYAQPEALSCPRQQTVVLSGSNAPPLQGLIVLFAGQVVGGGFSDPAGNWRIP LRVNEPPGIYPVEVRLRSNQQLLASMLCYVDVPLPATATSLPTATPLPTATAIARPTTALPAIPTATASVPSPTRPTATP TTPLIGTPTATGQANGTPTATATASPRTPTPTSVRTPTTTTTPEPAGLAVTIEVFPYDPDTSSLNDEYVNLYSLEENDIS IAGWRIVNISRPERPTFVFPPFILSPEVDLYVFTGPGTNNLSVGNFYWGRDEAVWRTGDIAQLLDAQGRLVSAYQVP
Sequences:
>Translated_317_residues MHKQRYYPITLLVAILVAASSILFLDYRLYAQPEALSCPRQQTVVLSGSNAPPLQGLIVLFAGQVVGGGFSDPAGNWRIP LRVNEPPGIYPVEVRLRSNQQLLASMLCYVDVPLPATATSLPTATPLPTATAIARPTTALPAIPTATASVPSPTRPTATP TTPLIGTPTATGQANGTPTATATASPRTPTPTSVRTPTTTTTPEPAGLAVTIEVFPYDPDTSSLNDEYVNLYSLEENDIS IAGWRIVNISRPERPTFVFPPFILSPEVDLYVFTGPGTNNLSVGNFYWGRDEAVWRTGDIAQLLDAQGRLVSAYQVP >Mature_317_residues MHKQRYYPITLLVAILVAASSILFLDYRLYAQPEALSCPRQQTVVLSGSNAPPLQGLIVLFAGQVVGGGFSDPAGNWRIP LRVNEPPGIYPVEVRLRSNQQLLASMLCYVDVPLPATATSLPTATPLPTATAIARPTTALPAIPTATASVPSPTRPTATP TTPLIGTPTATGQANGTPTATATASPRTPTPTSVRTPTTTTTPEPAGLAVTIEVFPYDPDTSSLNDEYVNLYSLEENDIS IAGWRIVNISRPERPTFVFPPFILSPEVDLYVFTGPGTNNLSVGNFYWGRDEAVWRTGDIAQLLDAQGRLVSAYQVP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33840; Mature: 33840
Theoretical pI: Translated: 4.82; Mature: 4.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHKQRYYPITLLVAILVAASSILFLDYRLYAQPEALSCPRQQTVVLSGSNAPPLQGLIVL CCCCEECHHHHHHHHHHHHCCEEEEEEEEEECCHHHCCCCCEEEEEECCCCCCHHHEEEE FAGQVVGGGFSDPAGNWRIPLRVNEPPGIYPVEVRLRSNQQLLASMLCYVDVPLPATATS EECHHCCCCCCCCCCCEEEEEEECCCCCEEEEEEEECCCHHHHHHHHHHEECCCCCCCCC LPTATPLPTATAIARPTTALPAIPTATASVPSPTRPTATPTTPLIGTPTATGQANGTPTA CCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCE TATASPRTPTPTSVRTPTTTTTPEPAGLAVTIEVFPYDPDTSSLNDEYVNLYSLEENDIS EEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCEEEEEEECCCCEE IAGWRIVNISRPERPTFVFPPFILSPEVDLYVFTGPGTNNLSVGNFYWGRDEAVWRTGDI EEEEEEEEECCCCCCCEECCCEEECCCCEEEEEECCCCCCCEECCEEECCCCCEEECCCH AQLLDAQGRLVSAYQVP HHHHCCCCCEEEEEECC >Mature Secondary Structure MHKQRYYPITLLVAILVAASSILFLDYRLYAQPEALSCPRQQTVVLSGSNAPPLQGLIVL CCCCEECHHHHHHHHHHHHCCEEEEEEEEEECCHHHCCCCCEEEEEECCCCCCHHHEEEE FAGQVVGGGFSDPAGNWRIPLRVNEPPGIYPVEVRLRSNQQLLASMLCYVDVPLPATATS EECHHCCCCCCCCCCCEEEEEEECCCCCEEEEEEEECCCHHHHHHHHHHEECCCCCCCCC LPTATPLPTATAIARPTTALPAIPTATASVPSPTRPTATPTTPLIGTPTATGQANGTPTA CCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCE TATASPRTPTPTSVRTPTTTTTPEPAGLAVTIEVFPYDPDTSSLNDEYVNLYSLEENDIS EEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCEEEEEEECCCCEE IAGWRIVNISRPERPTFVFPPFILSPEVDLYVFTGPGTNNLSVGNFYWGRDEAVWRTGDI EEEEEEEEECCCCCCCEECCCEEECCCCEEEEEECCCCCCCEECCEEECCCCCEEECCCH AQLLDAQGRLVSAYQVP HHHHCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA