Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
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Accession | NC_012032 |
Length | 5,268,950 |
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The map label for this gene is 222525406
Identifier: 222525406
GI number: 222525406
Start: 2727432
End: 2730050
Strand: Direct
Name: 222525406
Synonym: Chy400_2151
Alternate gene names: NA
Gene position: 2727432-2730050 (Clockwise)
Preceding gene: 222525405
Following gene: 222525407
Centisome position: 51.76
GC content: 59.3
Gene sequence:
>2619_bases ATGACGGGTCGGCTATTACTGGTTTTCAGTGTCTTGGTGATGCTGTTTACCACACCGGTTGTCCAGGCGCAGCCGCCGGC AGGTGCGCGATTGGCGCTCAACCGCTGTGGCGCAGGTGATACCGTGCAGTACACACTGGCGGTTGCCGGTGCAGTTATCC CCGATGCGCTGATTCCTGGCGGGATTGAGACACCCAGTTACACTGAGGCTTTTGCCGCACTGCGTCCATTCCTGACGGCT GCCGATTTGGCTATGGCGACGCTGGCCGGGCCACTGGCCGGCGAGGCATTACCTGCTCTGGCTCCTGCGTTAGCCGAGAG TAATCTGCTCTTGTTGGGGACTGCTCAGCCGCGCTTGCTCACTCTTGGCCCGACTGGTGTTGATGCTACCCTGCAAAATC TAAGCCGCTACGGCATTTTTCAACACGGTGCGGTGGCAGATGGCGAGACCCATCCCCCCTTTCTCAAGGTGACGGTACCC CATCCGGCTTCACCGCTGACCCTTGGCTTTCTCAGTGCCACCTGGGGTTTGGAAGGAAATGCCGATCCTCGCAATCAAAT TCATCTACTTGCCAATACTGCCGGTATTTTGCCCAATATCAGTGCTGCAATTGAGCAGGCCCGGCAGGAGACCGATCTGG TTGTTGTGATGGCAGCCTGGGGTCAACCCACCGACCCTGATCCGCCCCAGGCCCGGATCAATGCTGCCCGTAATCTGATT GCTGCCGGTGCCGATCTGGTGATTGGGAGTATCCCCGGCGAGACCGCAACGGTCGATTGGGTGCGCGCTGCGGATCGCGA AGGGCTGGTCATATTTTCTGCCGGTGATCTGATCGGTACCGCTACCACTCCGGCTGCCCTCATGTACATCGGTGTGACCC GCGATGAAGACGGGGCAGCCCGTGTCAGTGGTCTCCGTTATCTGCCGATCACGCCTGGTAACGGTGCCCAGGGGCCGACG CCGTTACCAACAGTCCCGCGTGAGTTTGCCCTGCTGATGGGTGATCCCGGTCAATTGCACGCTGTGCCATCCGTACCGCC AACCGGCAAGATCGAAGTTTGTCCGGCACTGGTGTTACCGGAAGCACCGCAAACCCCGATTACCGGCGACTTTGCCCGCT TTTATCAGACCTTCGGTGGGGAACAGACACGTTCTCTCATCGAGGGGATTGCGTTGCTCGGTCTACCATTAGGGCCGGTT ACCCGCGAGCTGGCCGGTGATTGTCGTCAAGAGGTTGCCGTGTTGTACACTGAACGTCAGCGATTGGAGTTGCATCCGGG TAATGACTGGCCCAATCGGGTGCTTGGCTCGCATGTCGGGGTCGTCGCCTTTCGGCTTGGTTATCCGGATCAGCCGGTAA CACCGCGTACCGATCTGAGTGATCCGTCCGCTTTCGCTGATCCACTGTTCCGCAGTTTCTATGAACGGTATGGTGGGATT AGTGTGTTTGGCTACCCGATCAGTGGCGCACTAACCGAACGTGACCCCAATACCGGACGTGATTTGATCGTGCAGTACTT TGAACGGGCTAGGTTTGAGCTTGATCCCATGGTGCCGTTACCCGCCGATCCACTCTGGCAGGTGCGTTTGGGGCTATTGG GGCGTGAAGTGGGTTCACAGGTATCTGCGCTACTGTGCCCGACGGCTCCTGCGTCGGCGAGTGCTGCTGCACTGGCAACC GCTACACCGGTCACATCACCGGCCACGGTGGTCGGCGCAGTGCAGAGCAGCGGTGATGGATTTCCGTTGCTTCTCGGCGC GATAATTGTCGTATCATTGATACTGGTTGGACTGATTTTGTCGGCAATATACGATCTATACCTTTTCAGCCAGCGCTACG TACAACCGGCGGCTCGTTCTACCCGGAGTGGTTATCGCATGGACACCGGTGCCCGTTCATCAGCACGTGATGCCTGGCAG GAGTCGCTGCGCGGTTTTTCACGTCGCGACAGTCAACCGGCACCCCAAACTGAGACTACCAAACGTTCCTGGCTGGGCAA GATGTTCAAAGGTCGTGACTCCGAACAGTCCTCGACCCAGCGCCAGACTCCGGGATGGCGCCAGCCAACCCGCACCGCCT CGCGCAACACTCAGCCACCCCAGGACTTGCCAGAACCATCGGCGGCTACCGGCCAGGCTGCTGACGACCGACCGCAAACA CTACGGGTTGCGCTAACTCCGAATGCTTCCCGTATGCCTGCTGCCTCGCCCCCATCGGCCATTGATCCGCTCAACGGCGA CGAACTGGCTGAATGGTTCGATACCGCCGATGAGGCGTCGGTCACCGATCATCGCCAGGGCCGTCTGGATGGCTATATCG GCGATCAACCGGTCGAGTGGAACGATTTGCCACCCGCCGAACGCGAGCGCTGGCTGGCGGAGCTTGGCCCACTGACCGAT GATAGCGCTGCCGATGTCCCGCCCGCTGAATGGTCACGCTGGCAAGATGAACTGACCGGCACAACCTCGCCAATGACGGC TGACCTGCCAGCACCAACCACGCCGGACACACCATTTGAAGAAACAACACAGCAGTTCAAGTCAGATGCCGACTCTGGGA CTACCCTGGGGCATCGTCCCGACGACGATGATTTACTGCGGAAACTGCTTGGCATATAA
Upstream 100 bases:
>100_bases CTCACCGGACAGCCTGATCCTGTAGTACAATTGTTGCAGTACAGGCATGAATGCCTGCCATAGTTCGCTCTGCCGGGGTG CCGGCGGAGGTGAGGCAACA
Downstream 100 bases:
>100_bases TAGTGTCAGCCGGGCACAAAGCCGTCTCCAGACGGTTGATTCGCAAACAGTTGAATGATATACTGCTCGCATCAACGAAC GTATATACCTGTCTGCGGAA
Product: poly-gamma-glutamate biosynthesis protein-like protein
Products: NA
Alternate protein names: VanW Family Protein; Sortase Family Protein; Ig Domain Domain Protein
Number of amino acids: Translated: 872; Mature: 871
Protein sequence:
>872_residues MTGRLLLVFSVLVMLFTTPVVQAQPPAGARLALNRCGAGDTVQYTLAVAGAVIPDALIPGGIETPSYTEAFAALRPFLTA ADLAMATLAGPLAGEALPALAPALAESNLLLLGTAQPRLLTLGPTGVDATLQNLSRYGIFQHGAVADGETHPPFLKVTVP HPASPLTLGFLSATWGLEGNADPRNQIHLLANTAGILPNISAAIEQARQETDLVVVMAAWGQPTDPDPPQARINAARNLI AAGADLVIGSIPGETATVDWVRAADREGLVIFSAGDLIGTATTPAALMYIGVTRDEDGAARVSGLRYLPITPGNGAQGPT PLPTVPREFALLMGDPGQLHAVPSVPPTGKIEVCPALVLPEAPQTPITGDFARFYQTFGGEQTRSLIEGIALLGLPLGPV TRELAGDCRQEVAVLYTERQRLELHPGNDWPNRVLGSHVGVVAFRLGYPDQPVTPRTDLSDPSAFADPLFRSFYERYGGI SVFGYPISGALTERDPNTGRDLIVQYFERARFELDPMVPLPADPLWQVRLGLLGREVGSQVSALLCPTAPASASAAALAT ATPVTSPATVVGAVQSSGDGFPLLLGAIIVVSLILVGLILSAIYDLYLFSQRYVQPAARSTRSGYRMDTGARSSARDAWQ ESLRGFSRRDSQPAPQTETTKRSWLGKMFKGRDSEQSSTQRQTPGWRQPTRTASRNTQPPQDLPEPSAATGQAADDRPQT LRVALTPNASRMPAASPPSAIDPLNGDELAEWFDTADEASVTDHRQGRLDGYIGDQPVEWNDLPPAERERWLAELGPLTD DSAADVPPAEWSRWQDELTGTTSPMTADLPAPTTPDTPFEETTQQFKSDADSGTTLGHRPDDDDLLRKLLGI
Sequences:
>Translated_872_residues MTGRLLLVFSVLVMLFTTPVVQAQPPAGARLALNRCGAGDTVQYTLAVAGAVIPDALIPGGIETPSYTEAFAALRPFLTA ADLAMATLAGPLAGEALPALAPALAESNLLLLGTAQPRLLTLGPTGVDATLQNLSRYGIFQHGAVADGETHPPFLKVTVP HPASPLTLGFLSATWGLEGNADPRNQIHLLANTAGILPNISAAIEQARQETDLVVVMAAWGQPTDPDPPQARINAARNLI AAGADLVIGSIPGETATVDWVRAADREGLVIFSAGDLIGTATTPAALMYIGVTRDEDGAARVSGLRYLPITPGNGAQGPT PLPTVPREFALLMGDPGQLHAVPSVPPTGKIEVCPALVLPEAPQTPITGDFARFYQTFGGEQTRSLIEGIALLGLPLGPV TRELAGDCRQEVAVLYTERQRLELHPGNDWPNRVLGSHVGVVAFRLGYPDQPVTPRTDLSDPSAFADPLFRSFYERYGGI SVFGYPISGALTERDPNTGRDLIVQYFERARFELDPMVPLPADPLWQVRLGLLGREVGSQVSALLCPTAPASASAAALAT ATPVTSPATVVGAVQSSGDGFPLLLGAIIVVSLILVGLILSAIYDLYLFSQRYVQPAARSTRSGYRMDTGARSSARDAWQ ESLRGFSRRDSQPAPQTETTKRSWLGKMFKGRDSEQSSTQRQTPGWRQPTRTASRNTQPPQDLPEPSAATGQAADDRPQT LRVALTPNASRMPAASPPSAIDPLNGDELAEWFDTADEASVTDHRQGRLDGYIGDQPVEWNDLPPAERERWLAELGPLTD DSAADVPPAEWSRWQDELTGTTSPMTADLPAPTTPDTPFEETTQQFKSDADSGTTLGHRPDDDDLLRKLLGI >Mature_871_residues TGRLLLVFSVLVMLFTTPVVQAQPPAGARLALNRCGAGDTVQYTLAVAGAVIPDALIPGGIETPSYTEAFAALRPFLTAA DLAMATLAGPLAGEALPALAPALAESNLLLLGTAQPRLLTLGPTGVDATLQNLSRYGIFQHGAVADGETHPPFLKVTVPH PASPLTLGFLSATWGLEGNADPRNQIHLLANTAGILPNISAAIEQARQETDLVVVMAAWGQPTDPDPPQARINAARNLIA AGADLVIGSIPGETATVDWVRAADREGLVIFSAGDLIGTATTPAALMYIGVTRDEDGAARVSGLRYLPITPGNGAQGPTP LPTVPREFALLMGDPGQLHAVPSVPPTGKIEVCPALVLPEAPQTPITGDFARFYQTFGGEQTRSLIEGIALLGLPLGPVT RELAGDCRQEVAVLYTERQRLELHPGNDWPNRVLGSHVGVVAFRLGYPDQPVTPRTDLSDPSAFADPLFRSFYERYGGIS VFGYPISGALTERDPNTGRDLIVQYFERARFELDPMVPLPADPLWQVRLGLLGREVGSQVSALLCPTAPASASAAALATA TPVTSPATVVGAVQSSGDGFPLLLGAIIVVSLILVGLILSAIYDLYLFSQRYVQPAARSTRSGYRMDTGARSSARDAWQE SLRGFSRRDSQPAPQTETTKRSWLGKMFKGRDSEQSSTQRQTPGWRQPTRTASRNTQPPQDLPEPSAATGQAADDRPQTL RVALTPNASRMPAASPPSAIDPLNGDELAEWFDTADEASVTDHRQGRLDGYIGDQPVEWNDLPPAERERWLAELGPLTDD SAADVPPAEWSRWQDELTGTTSPMTADLPAPTTPDTPFEETTQQFKSDADSGTTLGHRPDDDDLLRKLLGI
Specific function: Unknown
COG id: COG2843
COG function: function code M; Putative enzyme of poly-gamma-glutamate biosynthesis (capsule formation)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 92738; Mature: 92606
Theoretical pI: Translated: 4.52; Mature: 4.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGRLLLVFSVLVMLFTTPVVQAQPPAGARLALNRCGAGDTVQYTLAVAGAVIPDALIPG CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCCCEEEHHHHHHHHHHHHHCCC GIETPSYTEAFAALRPFLTAADLAMATLAGPLAGEALPALAPALAESNLLLLGTAQPRLL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCEEEEECCCCEEE TLGPTGVDATLQNLSRYGIFQHGAVADGETHPPFLKVTVPHPASPLTLGFLSATWGLEGN EECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEHHHHCCCCCCC ADPRNQIHLLANTAGILPNISAAIEQARQETDLVVVMAAWGQPTDPDPPQARINAARNLI CCCCCCEEEEECCCCCCCCHHHHHHHHHCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHH AAGADLVIGSIPGETATVDWVRAADREGLVIFSAGDLIGTATTPAALMYIGVTRDEDGAA HCCCCEEEECCCCCCCEEHHHHHCCCCCEEEEECCCEEECCCCCEEEEEEEEECCCCCCH RVSGLRYLPITPGNGAQGPTPLPTVPREFALLMGDPGQLHAVPSVPPTGKIEVCPALVLP HHCCEEEEECCCCCCCCCCCCCCCCCHHHEEEECCCCCEEECCCCCCCCCEEECCEEECC EAPQTPITGDFARFYQTFGGEQTRSLIEGIALLGLPLGPVTRELAGDCRQEVAVLYTERQ CCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCC RLELHPGNDWPNRVLGSHVGVVAFRLGYPDQPVTPRTDLSDPSAFADPLFRSFYERYGGI EEEECCCCCCHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCE SVFGYPISGALTERDPNTGRDLIVQYFERARFELDPMVPLPADPLWQVRLGLLGREVGSQ EEEECCCCCEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH VSALLCPTAPASASAAALATATPVTSPATVVGAVQSSGDGFPLLLGAIIVVSLILVGLIL HHEEECCCCCCCCCHHHHHCCCCCCCCHHHEEEHHCCCCCHHHHHHHHHHHHHHHHHHHH SAIYDLYLFSQRYVQPAARSTRSGYRMDTGARSSARDAWQESLRGFSRRDSQPAPQTETT HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHH KRSWLGKMFKGRDSEQSSTQRQTPGWRQPTRTASRNTQPPQDLPEPSAATGQAADDRPQT HHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCE LRVALTPNASRMPAASPPSAIDPLNGDELAEWFDTADEASVTDHRQGRLDGYIGDQPVEW EEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC NDLPPAERERWLAELGPLTDDSAADVPPAEWSRWQDELTGTTSPMTADLPAPTTPDTPFE CCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHH ETTQQFKSDADSGTTLGHRPDDDDLLRKLLGI HHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCC >Mature Secondary Structure TGRLLLVFSVLVMLFTTPVVQAQPPAGARLALNRCGAGDTVQYTLAVAGAVIPDALIPG CCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCCCEEEHHHHHHHHHHHHHCCC GIETPSYTEAFAALRPFLTAADLAMATLAGPLAGEALPALAPALAESNLLLLGTAQPRLL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCEEEEECCCCEEE TLGPTGVDATLQNLSRYGIFQHGAVADGETHPPFLKVTVPHPASPLTLGFLSATWGLEGN EECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEHHHHCCCCCCC ADPRNQIHLLANTAGILPNISAAIEQARQETDLVVVMAAWGQPTDPDPPQARINAARNLI CCCCCCEEEEECCCCCCCCHHHHHHHHHCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHH AAGADLVIGSIPGETATVDWVRAADREGLVIFSAGDLIGTATTPAALMYIGVTRDEDGAA HCCCCEEEECCCCCCCEEHHHHHCCCCCEEEEECCCEEECCCCCEEEEEEEEECCCCCCH RVSGLRYLPITPGNGAQGPTPLPTVPREFALLMGDPGQLHAVPSVPPTGKIEVCPALVLP HHCCEEEEECCCCCCCCCCCCCCCCCHHHEEEECCCCCEEECCCCCCCCCEEECCEEECC EAPQTPITGDFARFYQTFGGEQTRSLIEGIALLGLPLGPVTRELAGDCRQEVAVLYTERQ CCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCC RLELHPGNDWPNRVLGSHVGVVAFRLGYPDQPVTPRTDLSDPSAFADPLFRSFYERYGGI EEEECCCCCCHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCE SVFGYPISGALTERDPNTGRDLIVQYFERARFELDPMVPLPADPLWQVRLGLLGREVGSQ EEEECCCCCEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH VSALLCPTAPASASAAALATATPVTSPATVVGAVQSSGDGFPLLLGAIIVVSLILVGLIL HHEEECCCCCCCCCHHHHHCCCCCCCCHHHEEEHHCCCCCHHHHHHHHHHHHHHHHHHHH SAIYDLYLFSQRYVQPAARSTRSGYRMDTGARSSARDAWQESLRGFSRRDSQPAPQTETT HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHH KRSWLGKMFKGRDSEQSSTQRQTPGWRQPTRTASRNTQPPQDLPEPSAATGQAADDRPQT HHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCE LRVALTPNASRMPAASPPSAIDPLNGDELAEWFDTADEASVTDHRQGRLDGYIGDQPVEW EEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC NDLPPAERERWLAELGPLTDDSAADVPPAEWSRWQDELTGTTSPMTADLPAPTTPDTPFE CCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHH ETTQQFKSDADSGTTLGHRPDDDDLLRKLLGI HHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA