Definition Chloroflexus sp. Y-400-fl chromosome, complete genome.
Accession NC_012032
Length 5,268,950

Click here to switch to the map view.

The map label for this gene is pgsA [H]

Identifier: 222524820

GI number: 222524820

Start: 1967659

End: 1968297

Strand: Direct

Name: pgsA [H]

Synonym: Chy400_1547

Alternate gene names: 222524820

Gene position: 1967659-1968297 (Clockwise)

Preceding gene: 222524819

Following gene: 222524821

Centisome position: 37.34

GC content: 53.52

Gene sequence:

>639_bases
ATGATGCCATTTCTTGCTCGTTTTCGTCAGTTTTATGAACAGGCCTCGCTTCCGCTTGGTCATTTTTGCTCCCGTTTGGG
GATTCACCCAAATATACTAACCTATCTGAGTCTGCTGTTCAGTGTGCTGGCCGGTTATCTGCTCTCGCAACGTGAGTTTT
GGTGGGGCATTGTCGTTATCTTGCTCATGGGATTTGCTGACGTGCTGGATGGTGCAACTGCTCGCGCAAGTGGGATGGCC
AGCGAGTATGGAACAGTGCTCGATCATGTGACCGACCGCTACGCGGAGGCCTTTGTCATGGGAGGGCTGATGCTATCGGG
AGTGGTCGCACCGGTTTGGACGCTGTTTGCGATCTTTGGAATGGTGATGGCTAGCTACGTCCGTGCTCGGGCAGAGGCGA
CCGGGAAGCTTGCTTCCTGCAACGTTGGATTTGCCGGACGACAGGAGAAGCTCGGTCTGCTGCTCATTGGTCTGATATTG
ATGCCGTTTTTTCCTGATCGACCGGTGCTGGAATGGGCGGTTATTGCGGTGGGTATTGCATCCCACATTACTGCCGTACA
GCGCCTGTTATACACTCGTCAGATGCTGGTTGGTTCGGCTCGCGATCCCAAACTGCGAAAGGAATCTGGGATTATCTAG

Upstream 100 bases:

>100_bases
ATCTCCTTAGGAGAAGTAGAACGTCGGACAATGTCTTTGTTGTTACAGTCCAAGTTGTAAGGTGTAGTTCAGAGAGATCG
TCAGTAAAGGAAGAGTGCCA

Downstream 100 bases:

>100_bases
TTGTAACATATAGAGGTTCCTATGGCGCTCTCTGAAGCAGAAGTTCGTCACGTGGCCCGACTCGCCCGGATTGCGTTGTC
GGATGAAGAAATTGCTCTGA

Product: CDP-alcohol phosphatidyltransferase

Products: NA

Alternate protein names: Phosphatidylinositol synthase; PI synthase [H]

Number of amino acids: Translated: 212; Mature: 212

Protein sequence:

>212_residues
MMPFLARFRQFYEQASLPLGHFCSRLGIHPNILTYLSLLFSVLAGYLLSQREFWWGIVVILLMGFADVLDGATARASGMA
SEYGTVLDHVTDRYAEAFVMGGLMLSGVVAPVWTLFAIFGMVMASYVRARAEATGKLASCNVGFAGRQEKLGLLLIGLIL
MPFFPDRPVLEWAVIAVGIASHITAVQRLLYTRQMLVGSARDPKLRKESGII

Sequences:

>Translated_212_residues
MMPFLARFRQFYEQASLPLGHFCSRLGIHPNILTYLSLLFSVLAGYLLSQREFWWGIVVILLMGFADVLDGATARASGMA
SEYGTVLDHVTDRYAEAFVMGGLMLSGVVAPVWTLFAIFGMVMASYVRARAEATGKLASCNVGFAGRQEKLGLLLIGLIL
MPFFPDRPVLEWAVIAVGIASHITAVQRLLYTRQMLVGSARDPKLRKESGII
>Mature_212_residues
MMPFLARFRQFYEQASLPLGHFCSRLGIHPNILTYLSLLFSVLAGYLLSQREFWWGIVVILLMGFADVLDGATARASGMA
SEYGTVLDHVTDRYAEAFVMGGLMLSGVVAPVWTLFAIFGMVMASYVRARAEATGKLASCNVGFAGRQEKLGLLLIGLIL
MPFFPDRPVLEWAVIAVGIASHITAVQRLLYTRQMLVGSARDPKLRKESGII

Specific function: Unknown

COG id: COG0558

COG function: function code I; Phosphatidylglycerophosphate synthase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CDP-alcohol phosphatidyltransferase class-I family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000462 [H]

Pfam domain/function: PF01066 CDP-OH_P_transf [H]

EC number: =2.7.8.11 [H]

Molecular weight: Translated: 23336; Mature: 23336

Theoretical pI: Translated: 9.41; Mature: 9.41

Prosite motif: PS00379 CDP_ALCOHOL_P_TRANSF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMPFLARFRQFYEQASLPLGHFCSRLGIHPNILTYLSLLFSVLAGYLLSQREFWWGIVVI
CCHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLMGFADVLDGATARASGMASEYGTVLDHVTDRYAEAFVMGGLMLSGVVAPVWTLFAIFG
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MVMASYVRARAEATGKLASCNVGFAGRQEKLGLLLIGLILMPFFPDRPVLEWAVIAVGIA
HHHHHHHHHHHHHHCCHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
SHITAVQRLLYTRQMLVGSARDPKLRKESGII
HHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCC
>Mature Secondary Structure
MMPFLARFRQFYEQASLPLGHFCSRLGIHPNILTYLSLLFSVLAGYLLSQREFWWGIVVI
CCHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLMGFADVLDGATARASGMASEYGTVLDHVTDRYAEAFVMGGLMLSGVVAPVWTLFAIFG
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MVMASYVRARAEATGKLASCNVGFAGRQEKLGLLLIGLILMPFFPDRPVLEWAVIAVGIA
HHHHHHHHHHHHHHCCHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
SHITAVQRLLYTRQMLVGSARDPKLRKESGII
HHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10889206 [H]