| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is pgsA [H]
Identifier: 222524820
GI number: 222524820
Start: 1967659
End: 1968297
Strand: Direct
Name: pgsA [H]
Synonym: Chy400_1547
Alternate gene names: 222524820
Gene position: 1967659-1968297 (Clockwise)
Preceding gene: 222524819
Following gene: 222524821
Centisome position: 37.34
GC content: 53.52
Gene sequence:
>639_bases ATGATGCCATTTCTTGCTCGTTTTCGTCAGTTTTATGAACAGGCCTCGCTTCCGCTTGGTCATTTTTGCTCCCGTTTGGG GATTCACCCAAATATACTAACCTATCTGAGTCTGCTGTTCAGTGTGCTGGCCGGTTATCTGCTCTCGCAACGTGAGTTTT GGTGGGGCATTGTCGTTATCTTGCTCATGGGATTTGCTGACGTGCTGGATGGTGCAACTGCTCGCGCAAGTGGGATGGCC AGCGAGTATGGAACAGTGCTCGATCATGTGACCGACCGCTACGCGGAGGCCTTTGTCATGGGAGGGCTGATGCTATCGGG AGTGGTCGCACCGGTTTGGACGCTGTTTGCGATCTTTGGAATGGTGATGGCTAGCTACGTCCGTGCTCGGGCAGAGGCGA CCGGGAAGCTTGCTTCCTGCAACGTTGGATTTGCCGGACGACAGGAGAAGCTCGGTCTGCTGCTCATTGGTCTGATATTG ATGCCGTTTTTTCCTGATCGACCGGTGCTGGAATGGGCGGTTATTGCGGTGGGTATTGCATCCCACATTACTGCCGTACA GCGCCTGTTATACACTCGTCAGATGCTGGTTGGTTCGGCTCGCGATCCCAAACTGCGAAAGGAATCTGGGATTATCTAG
Upstream 100 bases:
>100_bases ATCTCCTTAGGAGAAGTAGAACGTCGGACAATGTCTTTGTTGTTACAGTCCAAGTTGTAAGGTGTAGTTCAGAGAGATCG TCAGTAAAGGAAGAGTGCCA
Downstream 100 bases:
>100_bases TTGTAACATATAGAGGTTCCTATGGCGCTCTCTGAAGCAGAAGTTCGTCACGTGGCCCGACTCGCCCGGATTGCGTTGTC GGATGAAGAAATTGCTCTGA
Product: CDP-alcohol phosphatidyltransferase
Products: NA
Alternate protein names: Phosphatidylinositol synthase; PI synthase [H]
Number of amino acids: Translated: 212; Mature: 212
Protein sequence:
>212_residues MMPFLARFRQFYEQASLPLGHFCSRLGIHPNILTYLSLLFSVLAGYLLSQREFWWGIVVILLMGFADVLDGATARASGMA SEYGTVLDHVTDRYAEAFVMGGLMLSGVVAPVWTLFAIFGMVMASYVRARAEATGKLASCNVGFAGRQEKLGLLLIGLIL MPFFPDRPVLEWAVIAVGIASHITAVQRLLYTRQMLVGSARDPKLRKESGII
Sequences:
>Translated_212_residues MMPFLARFRQFYEQASLPLGHFCSRLGIHPNILTYLSLLFSVLAGYLLSQREFWWGIVVILLMGFADVLDGATARASGMA SEYGTVLDHVTDRYAEAFVMGGLMLSGVVAPVWTLFAIFGMVMASYVRARAEATGKLASCNVGFAGRQEKLGLLLIGLIL MPFFPDRPVLEWAVIAVGIASHITAVQRLLYTRQMLVGSARDPKLRKESGII >Mature_212_residues MMPFLARFRQFYEQASLPLGHFCSRLGIHPNILTYLSLLFSVLAGYLLSQREFWWGIVVILLMGFADVLDGATARASGMA SEYGTVLDHVTDRYAEAFVMGGLMLSGVVAPVWTLFAIFGMVMASYVRARAEATGKLASCNVGFAGRQEKLGLLLIGLIL MPFFPDRPVLEWAVIAVGIASHITAVQRLLYTRQMLVGSARDPKLRKESGII
Specific function: Unknown
COG id: COG0558
COG function: function code I; Phosphatidylglycerophosphate synthase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CDP-alcohol phosphatidyltransferase class-I family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000462 [H]
Pfam domain/function: PF01066 CDP-OH_P_transf [H]
EC number: =2.7.8.11 [H]
Molecular weight: Translated: 23336; Mature: 23336
Theoretical pI: Translated: 9.41; Mature: 9.41
Prosite motif: PS00379 CDP_ALCOHOL_P_TRANSF
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMPFLARFRQFYEQASLPLGHFCSRLGIHPNILTYLSLLFSVLAGYLLSQREFWWGIVVI CCHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLMGFADVLDGATARASGMASEYGTVLDHVTDRYAEAFVMGGLMLSGVVAPVWTLFAIFG HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MVMASYVRARAEATGKLASCNVGFAGRQEKLGLLLIGLILMPFFPDRPVLEWAVIAVGIA HHHHHHHHHHHHHHCCHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH SHITAVQRLLYTRQMLVGSARDPKLRKESGII HHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCC >Mature Secondary Structure MMPFLARFRQFYEQASLPLGHFCSRLGIHPNILTYLSLLFSVLAGYLLSQREFWWGIVVI CCHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLMGFADVLDGATARASGMASEYGTVLDHVTDRYAEAFVMGGLMLSGVVAPVWTLFAIFG HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MVMASYVRARAEATGKLASCNVGFAGRQEKLGLLLIGLILMPFFPDRPVLEWAVIAVGIA HHHHHHHHHHHHHHCCHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH SHITAVQRLLYTRQMLVGSARDPKLRKESGII HHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 10889206 [H]