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The map label for this gene is dppC [H]

Identifier: 222524760

GI number: 222524760

Start: 1880849

End: 1881688

Strand: Direct

Name: dppC [H]

Synonym: Chy400_1487

Alternate gene names: 222524760

Gene position: 1880849-1881688 (Clockwise)

Preceding gene: 222524759

Following gene: 222524761

Centisome position: 35.7

GC content: 60.36

Gene sequence:

>840_bases
ATGAATCTTCAGTCGTTGAGACGAGCCTTTTTTGCCGACCCGGCAACTGCAACCGGCACCGTCATCGTGATCTGCTTTCT
GGGGATGGCACTCTTTGGGCCGCTGATCGCACCCTACAGTCCGACTGCACAGAACGCCGATCTGATCCGGCAACCACCCT
CATTCGCGCACCCGCTCGGCACTGATCGGCTTGGTCGCGATCTGTTGAGCCGGATCGTGTACGGCGCACGCGATATTCTG
TCGCTTGCCGGGGGAGGTACCGTGCTGGCGGTGGTACTTGGCACACTGATTGGCGTGAGCGTAACGTATCTAGGCGGCTG
GTTGGAAGAGCTGGTTTTTCGCCTCTTCGATGGCCTGCTCGCGCTGCCGGCACTACTGCTGGCACTGCTGCTTCTCGGTG
CGGTTGGCCCTTCGCGTACCGGTGTGCTGCTGGTGATTGTACTGGTCTACACGCCAATCGTGGCTCGCGTTGTGCGGAGT
GTCGTATTATCGCTCAAGTCGCGAGGTTTTATCGAGGCAGCGCGTATGCGCGGTGAACGCCTTGGGTACATCTTGTGGCG
CGAGTTGTTGCCTCTGGTAGCCCCAACGCTGGCCGTGGAAGCCGCCCTCCGCTTTTCGTATGCGATCTTTCTCGTCGCAT
CGCTGGGCTTCCTCGGCGTTGGTGTTCAGCCTCCCAGCCCTGATTGGGGCTTGATGGTGCTCGAAGCGCGCAATGAATTC
GCGCTTGCTCCATGGTCGCTCTATGTACCGGCAACGGCCATTGCATTGCTGGTGGTCGGCATCAACCTCATGGCCGAGGG
CGTGCGGCGGGCGATCCGTGGCGAGATGGCAGGTTATTGA

Upstream 100 bases:

>100_bases
CCTCTCCCATCCCGGTAAGGTCTCTTCGGATCGGCGTTACGGCATTCTGATAAAGCTGGTCTTGCAAGCCGCAATTACTC
ATTGATCCCGTCACCGAGCC

Downstream 100 bases:

>100_bases
TGACAGTACCGGTTTTAGCTGTAAATAATCTTACCGTGGCGTATCGAGTTGGTCGGCAGATGTTGCCGGTTGTGCGTGAA
ATCAGCCTGACAGTCACTGC

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 279; Mature: 279

Protein sequence:

>279_residues
MNLQSLRRAFFADPATATGTVIVICFLGMALFGPLIAPYSPTAQNADLIRQPPSFAHPLGTDRLGRDLLSRIVYGARDIL
SLAGGGTVLAVVLGTLIGVSVTYLGGWLEELVFRLFDGLLALPALLLALLLLGAVGPSRTGVLLVIVLVYTPIVARVVRS
VVLSLKSRGFIEAARMRGERLGYILWRELLPLVAPTLAVEAALRFSYAIFLVASLGFLGVGVQPPSPDWGLMVLEARNEF
ALAPWSLYVPATAIALLVVGINLMAEGVRRAIRGEMAGY

Sequences:

>Translated_279_residues
MNLQSLRRAFFADPATATGTVIVICFLGMALFGPLIAPYSPTAQNADLIRQPPSFAHPLGTDRLGRDLLSRIVYGARDIL
SLAGGGTVLAVVLGTLIGVSVTYLGGWLEELVFRLFDGLLALPALLLALLLLGAVGPSRTGVLLVIVLVYTPIVARVVRS
VVLSLKSRGFIEAARMRGERLGYILWRELLPLVAPTLAVEAALRFSYAIFLVASLGFLGVGVQPPSPDWGLMVLEARNEF
ALAPWSLYVPATAIALLVVGINLMAEGVRRAIRGEMAGY
>Mature_279_residues
MNLQSLRRAFFADPATATGTVIVICFLGMALFGPLIAPYSPTAQNADLIRQPPSFAHPLGTDRLGRDLLSRIVYGARDIL
SLAGGGTVLAVVLGTLIGVSVTYLGGWLEELVFRLFDGLLALPALLLALLLLGAVGPSRTGVLLVIVLVYTPIVARVVRS
VVLSLKSRGFIEAARMRGERLGYILWRELLPLVAPTLAVEAALRFSYAIFLVASLGFLGVGVQPPSPDWGLMVLEARNEF
ALAPWSLYVPATAIALLVVGINLMAEGVRRAIRGEMAGY

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787054, Length=278, Percent_Identity=35.6115107913669, Blast_Score=162, Evalue=2e-41,
Organism=Escherichia coli, GI1787760, Length=259, Percent_Identity=35.5212355212355, Blast_Score=154, Evalue=5e-39,
Organism=Escherichia coli, GI1789964, Length=280, Percent_Identity=37.5, Blast_Score=140, Evalue=9e-35,
Organism=Escherichia coli, GI1787549, Length=277, Percent_Identity=33.2129963898917, Blast_Score=139, Evalue=3e-34,
Organism=Escherichia coli, GI1789889, Length=232, Percent_Identity=32.7586206896552, Blast_Score=119, Evalue=2e-28,
Organism=Escherichia coli, GI1787498, Length=271, Percent_Identity=29.8892988929889, Blast_Score=108, Evalue=4e-25,
Organism=Escherichia coli, GI1788505, Length=232, Percent_Identity=31.0344827586207, Blast_Score=75, Evalue=7e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 29777; Mature: 29777

Theoretical pI: Translated: 9.86; Mature: 9.86

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLQSLRRAFFADPATATGTVIVICFLGMALFGPLIAPYSPTAQNADLIRQPPSFAHPLG
CCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCCCC
TDRLGRDLLSRIVYGARDILSLAGGGTVLAVVLGTLIGVSVTYLGGWLEELVFRLFDGLL
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALPALLLALLLLGAVGPSRTGVLLVIVLVYTPIVARVVRSVVLSLKSRGFIEAARMRGER
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
LGYILWRELLPLVAPTLAVEAALRFSYAIFLVASLGFLGVGVQPPSPDWGLMVLEARNEF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCE
ALAPWSLYVPATAIALLVVGINLMAEGVRRAIRGEMAGY
EECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNLQSLRRAFFADPATATGTVIVICFLGMALFGPLIAPYSPTAQNADLIRQPPSFAHPLG
CCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCCCC
TDRLGRDLLSRIVYGARDILSLAGGGTVLAVVLGTLIGVSVTYLGGWLEELVFRLFDGLL
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALPALLLALLLLGAVGPSRTGVLLVIVLVYTPIVARVVRSVVLSLKSRGFIEAARMRGER
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
LGYILWRELLPLVAPTLAVEAALRFSYAIFLVASLGFLGVGVQPPSPDWGLMVLEARNEF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCE
ALAPWSLYVPATAIALLVVGINLMAEGVRRAIRGEMAGY
EECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9680333 [H]