Definition Chloroflexus sp. Y-400-fl chromosome, complete genome.
Accession NC_012032
Length 5,268,950

Click here to switch to the map view.

The map label for this gene is 222524756

Identifier: 222524756

GI number: 222524756

Start: 1878016

End: 1878261

Strand: Direct

Name: 222524756

Synonym: Chy400_1483

Alternate gene names: NA

Gene position: 1878016-1878261 (Clockwise)

Preceding gene: 222524754

Following gene: 222524757

Centisome position: 35.64

GC content: 49.19

Gene sequence:

>246_bases
ATGTCGCGGATCGCATCCTCATTGCTGTTACGCCATCTGCATAGAGCGCTGGCATCACGCTTGCCGCAATCCCGTCGCCG
ATGTCGATTTCTTTCCAATCGGGTCACAGTACGGTTTGAAACAGGCTCTGGTCAGATCGGGAACAACAGTATTATCAACG
AACGATTCAGGGTGATATGCCATACAGAATGTGGTATATTGCAGATAGTCCACAGTGATATGCCACAGGAGCTTGCCGAT
GATTAA

Upstream 100 bases:

>100_bases
AATCCCGGTCGAGTGAGCCAGGGCGACCTCATTTCTCCCCTGAAGTGGCATTGTGTGGATGCAATATTTGACCTATTGTG
GCGATACAGGTGAGGTACAG

Downstream 100 bases:

>100_bases
GCGCATTCCACCAGGACCCGGACAGGAGTCGGTATGGGATTACCCTCGTCCCCCGCGACTGGAACCAACATCGCGGCGTA
TCCGGGTGATCTTTGCCGGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 81; Mature: 80

Protein sequence:

>81_residues
MSRIASSLLLRHLHRALASRLPQSRRRCRFLSNRVTVRFETGSGQIGNNSIINERFRVICHTECGILQIVHSDMPQELAD
D

Sequences:

>Translated_81_residues
MSRIASSLLLRHLHRALASRLPQSRRRCRFLSNRVTVRFETGSGQIGNNSIINERFRVICHTECGILQIVHSDMPQELAD
D
>Mature_80_residues
SRIASSLLLRHLHRALASRLPQSRRRCRFLSNRVTVRFETGSGQIGNNSIINERFRVICHTECGILQIVHSDMPQELADD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9286; Mature: 9155

Theoretical pI: Translated: 11.46; Mature: 11.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.7 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
3.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRIASSLLLRHLHRALASRLPQSRRRCRFLSNRVTVRFETGSGQIGNNSIINERFRVIC
CHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCEEEEEECCCCCCCCCHHHHHHHHHHC
HTECGILQIVHSDMPQELADD
CCCCCHHHHHHHCCCHHHCCC
>Mature Secondary Structure 
SRIASSLLLRHLHRALASRLPQSRRRCRFLSNRVTVRFETGSGQIGNNSIINERFRVIC
HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCEEEEEECCCCCCCCCHHHHHHHHHHC
HTECGILQIVHSDMPQELADD
CCCCCHHHHHHHCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA