| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is mhpD3 [H]
Identifier: 222524752
GI number: 222524752
Start: 1873965
End: 1874786
Strand: Direct
Name: mhpD3 [H]
Synonym: Chy400_1479
Alternate gene names: 222524752
Gene position: 1873965-1874786 (Clockwise)
Preceding gene: 222524751
Following gene: 222524753
Centisome position: 35.57
GC content: 56.93
Gene sequence:
>822_bases ATGCCTGAGCAATCAGTAACAACCCAAACCACCGATGACGCACTTATTATCGCTCTGGCACAACGGCTCGATCAGGCCTG GGAAGAGCGCTTCACCATACTTCCCCTCACCGAAAGCGAGGGCATTACCAATGCAGACATTGCTTACCGGATTCAGACGC ATTGGACAGACATGCGCGTTCAGCGCGGCGAGCGGATCATTGGGCGCAAAATCGGCCTGACCAGCAAAGCTGTGCAAGAG CAGATGGGCGTCAACGAGCCGGATTATGGCACTCTATGGGCTTCGCGCTATTTTCCGGCCAGAAATGGGCGCGCTGAAGC GCCTTTTGAAATCTTTCTCCAACCGCGGGTCGAGGGTGAAATTGCGTTTCTAATTGGAGAAACCCTCGACTGGCCGGATA TTACCCCGCAACAGGTGCTGGCAGCAACCGAGGCACTGGCGGCAGCTATCGAAATTGTGGATAGTCGCATTGATCGCTGG CGCATTAAGCTAGCCGACACGATTGCCGATAACGCCTCCTACGGTGGCTTGACGATTGGCGCCTGGAGCAGGGCAATGCG CAGCAGCGACCTGCGCACCATTGGTATGGTGATGAGCCACAATGGTCGCCCCACCGTCTTTGGTACCGGTGCCGCTGCGC TTGGGCATCCGGCACTGGCGGTGGCATGGCTGGCGAACAAACTGCGCGCATTCGGGATTCCGCTGCGTGCCGGTGATATT GTGATCTCTGGAGCTTTGGCAGCAACAATTCCGGTGCAACGCGGCGATCTGTTCACGCTGGAAATGCATGATCAACCACC ACTCCACTTACGGTTCGTGTGA
Upstream 100 bases:
>100_bases TGCGCGATCTGCGCGTACCTTTCGGTGGTATGAAACAGAGTGGAATTGGCCGGGAAGGTGGGCACTACAGCCTTGAGTTC TACACGGAGGCAAAGACGAT
Downstream 100 bases:
>100_bases AGGAGATTCAGATGCCGATGCTCGAAGTCTTCTACAGCGGGGATCGACCGCCAGACCGTACCCGGAAGCAGGCATTTGCT GCTGAAGCCAGTGCTATCTT
Product: 4-oxalocrotonate decarboxylase
Products: NA
Alternate protein names: 2-hydroxypentadienoic acid hydratase 3 [H]
Number of amino acids: Translated: 273; Mature: 272
Protein sequence:
>273_residues MPEQSVTTQTTDDALIIALAQRLDQAWEERFTILPLTESEGITNADIAYRIQTHWTDMRVQRGERIIGRKIGLTSKAVQE QMGVNEPDYGTLWASRYFPARNGRAEAPFEIFLQPRVEGEIAFLIGETLDWPDITPQQVLAATEALAAAIEIVDSRIDRW RIKLADTIADNASYGGLTIGAWSRAMRSSDLRTIGMVMSHNGRPTVFGTGAAALGHPALAVAWLANKLRAFGIPLRAGDI VISGALAATIPVQRGDLFTLEMHDQPPLHLRFV
Sequences:
>Translated_273_residues MPEQSVTTQTTDDALIIALAQRLDQAWEERFTILPLTESEGITNADIAYRIQTHWTDMRVQRGERIIGRKIGLTSKAVQE QMGVNEPDYGTLWASRYFPARNGRAEAPFEIFLQPRVEGEIAFLIGETLDWPDITPQQVLAATEALAAAIEIVDSRIDRW RIKLADTIADNASYGGLTIGAWSRAMRSSDLRTIGMVMSHNGRPTVFGTGAAALGHPALAVAWLANKLRAFGIPLRAGDI VISGALAATIPVQRGDLFTLEMHDQPPLHLRFV >Mature_272_residues PEQSVTTQTTDDALIIALAQRLDQAWEERFTILPLTESEGITNADIAYRIQTHWTDMRVQRGERIIGRKIGLTSKAVQEQ MGVNEPDYGTLWASRYFPARNGRAEAPFEIFLQPRVEGEIAFLIGETLDWPDITPQQVLAATEALAAAIEIVDSRIDRWR IKLADTIADNASYGGLTIGAWSRAMRSSDLRTIGMVMSHNGRPTVFGTGAAALGHPALAVAWLANKLRAFGIPLRAGDIV ISGALAATIPVQRGDLFTLEMHDQPPLHLRFV
Specific function: Catalyzes the conversion of 2-hydroxypentadienoic acid (enolic form of 2-oxopent-4-enoate) to 4-hydroxy-2-ketopentanoic acid [H]
COG id: COG3971
COG function: function code Q; 2-keto-4-pentenoate hydratase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the hydratase/decarboxylase family. MhpD subfamily [H]
Homologues:
Organism=Escherichia coli, GI87081722, Length=241, Percent_Identity=42.3236514522822, Blast_Score=179, Evalue=1e-46,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002529 - InterPro: IPR011234 [H]
Pfam domain/function: PF01557 FAA_hydrolase [H]
EC number: =4.2.1.80 [H]
Molecular weight: Translated: 30070; Mature: 29939
Theoretical pI: Translated: 5.37; Mature: 5.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPEQSVTTQTTDDALIIALAQRLDQAWEERFTILPLTESEGITNADIAYRIQTHWTDMRV CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCEEEEEEECCHHHHH QRGERIIGRKIGLTSKAVQEQMGVNEPDYGTLWASRYFPARNGRAEAPFEIFLQPRVEGE HCCCHHHHHHCCCCHHHHHHHHCCCCCCCCEEEHHHCCCCCCCCCCCCEEEEEECCCCCE IAFLIGETLDWPDITPQQVLAATEALAAAIEIVDSRIDRWRIKLADTIADNASYGGLTIG EEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEEHHHHHCCCCCCCEEEH AWSRAMRSSDLRTIGMVMSHNGRPTVFGTGAAALGHPALAVAWLANKLRAFGIPLRAGDI HHHHHHHHCCCCEEEHEEECCCCCEEEECCCHHHCCHHHHHHHHHHHHHHHCCCEECCCE VISGALAATIPVQRGDLFTLEMHDQPPLHLRFV EEECCEEEEEEECCCCEEEEEECCCCCEEEEEC >Mature Secondary Structure PEQSVTTQTTDDALIIALAQRLDQAWEERFTILPLTESEGITNADIAYRIQTHWTDMRV CCCCCCCCCCCCHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCEEEEEEECCHHHHH QRGERIIGRKIGLTSKAVQEQMGVNEPDYGTLWASRYFPARNGRAEAPFEIFLQPRVEGE HCCCHHHHHHCCCCHHHHHHHHCCCCCCCCEEEHHHCCCCCCCCCCCCEEEEEECCCCCE IAFLIGETLDWPDITPQQVLAATEALAAAIEIVDSRIDRWRIKLADTIADNASYGGLTIG EEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEEHHHHHCCCCCCCEEEH AWSRAMRSSDLRTIGMVMSHNGRPTVFGTGAAALGHPALAVAWLANKLRAFGIPLRAGDI HHHHHHHHCCCCEEEHEEECCCCCEEEECCCHHHCCHHHHHHHHHHHHHHHCCCEECCCE VISGALAATIPVQRGDLFTLEMHDQPPLHLRFV EEECCEEEEEEECCCCEEEEEECCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9791097; 12823813 [H]