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The map label for this gene is yjcR [C]

Identifier: 222524555

GI number: 222524555

Start: 1637162

End: 1638982

Strand: Direct

Name: yjcR [C]

Synonym: Chy400_1279

Alternate gene names: 222524555

Gene position: 1637162-1638982 (Clockwise)

Preceding gene: 222524554

Following gene: 222524556

Centisome position: 31.07

GC content: 59.58

Gene sequence:

>1821_bases
ATGAGTCAATCATCACGCCCTCGCCGTCGTCAAAATCGTCTTGGATGGGGAATCGGCATTCTCGTTGTTATCGGTGTTCT
CGTAGCCGGTTTCTTTCTTTTTAACCGTGACCAACCTTCCAATGTCAGGCTTAACTATGCCCTCACCCGCCCACAACGCA
GCCCAATCAGTGCAACAGTGAATGCCAGTGGCTCTATTCAACCTCAGCAGGTGATCGATCTCACTTTCGCCAGCAGTGGT
CTGATCAGTGAGGTCCTGGTACAGGTTGGCGATCAGGTAGCAGCCGGCCAGGTGCTGGCCCGACTTGACACTCGCGATCT
GGAATTGCGGGTCGATCAGGCTGCGGCCCAACTGGCGCAGGCGCAGGCCAGCCTTGACCGATTGCGGGCCGGACCGAGCG
CTGCCGAGGTCGCTGCGGCAGAGGCCCAACTGGCGCAGGCGCAGGCGCAGTTACGCCAGACAACCGGTAATGTTACCGAG
CAGGATTTGGCGGCAGCGCGGGCCCAGGTTGAACAGGCACGGGCGAATCTTGAACGGGTACTGGGTGGGCCAAAGGCCAG
CGAGGTAGCGCAGGCGCAGGCGCAGGTGGATCAGGCCGCAGCGGCCTTGCAGGCGCAACGTGATTCGCTTTCAGCAGCAA
AAACCAGAGCCGAGTCGCAGTTATTACAAGCCGCCAATACATTACGCGACCGCCAGGCCGAGTATAGCCGTATTTACAAC
GAAAATCGAGAGCGCGAGCAGCAACTGGCTCGCTTCGGGCAGTCGTTACCACAATCAGCGCTCGATACTGAAGCAGCAGC
ACTGCGGGCGGTCGAAAATGCCGAAGAGCAGATGCGGCAGGCTCAGGTAGCCTATGAACAGGCCAGGCAGGCCGAGATTA
CCGGCATCGCGCAGGCAGAAGCTCAACTCCGCAGTGCCCAGGCCAACCTTGAGCGCATATTAGCCGGCGCCGATCCAGAT
CAGGTAGCCGCAGCCCGTGCCCAGTTAGCCCAGGCTGAAGCCAATCTGAATAAGCTGCTCGGCGATCAGCGAGCCGGCAG
TCTGGCTGCGGCCAATGCGGCGGTTGCCAGTGCGCAGGCAAATCTGCAACGGATTACCGCTCCTCCGAGCGAGGCTGATC
TGGCCAGCGCTGAAGCCCAGGTCGCCAGTGCCCGGGCCAGCCTGGCGCAGGCGCAGCTTGCCCTGGAACGGGCAACCCTG
ACCGCACCTATTGCCGGAGTGGTAGCCGAGGTGAATCTGGAAGTTGGTGAGTTCTATAACGCTGCACGACCGGCCGTGGT
ATTGGCTGATCTGAGTGGTTATTACGTTGATGTGACCGTTGATGAAATCGATGTCGCCCAGATTGCGGTTGGTCAACCCG
TTATTCTCGTCCTCGATGCGCTGCCTAACCTCGATCTGCGTGGAACGGTTGCCCGCATCAATCCGCTCTCCATTGTGCAA
TCCGGGGTTACTGCCTACACCGTGCGGATTGTGACCGATGATCCACCCGCCTCAGTGCGTCCGGGTATGTCGGCAAGCGC
CGATATTATCGTGGCCGAGAAGAGTGAAGCGCTGGTCGTACCACGCCGGGCGATCCGTGCTGAAGGTGGTCAGTTTTTTG
TGGATGTGACGACCGATCCGGCGCTGTGTTCGCTCGACATCGCGCAACGTCCATTGCAGCCACCGCTACAGGCGGTTGCG
GTGCAAACCGGCTTGAGCAACGAACAGATCATCGAAATCAGTTCAGGGAATATCGATGAAAACAGTTGTGTCTACGTCCC
TGGCGTCGATGCCCGTATCGATCTCTTCAGTGGCCCACCTCCCGGTGTACGCGGACGCTAA

Upstream 100 bases:

>100_bases
TAACCTTGCATACCGTCAAATGTACCGGTTACCGGTAGTAACTCGTAGTATGATGATACTGATGTGTACAATTGTGCGTG
CGCAGTATTGAGGCTTTCGT

Downstream 100 bases:

>100_bases
GCTAAACGGAGCAGGTAACGATGAAGCTGATAGAAGCGTTGCGGATCGCTTTCAGCAGTTTACTGGCCAATAAACTGCGC
GCCATTCTGACCATGCTCGG

Product: RND family efflux transporter MFP subunit

Products: NA

Alternate protein names: RND Family Efflux Transporter MFP Subunit; Secretion Protein HlyD Family Protein; Secretion Protein HlyD; Biotin/Lipoyl Attachment Domain-Containing Protein; Multidrug Resistance Efflux Pump-Like Protein; Periplasmic Component Of Efflux System; Secretion Protein Hlyd; HlyD Family Secretion Protein; Membrane-Fusion Protein; Membrane Permease Cation Efflux Pumps; Efflux Transporter; Secretion Protein; Macrolide-Specific Efflux Protein Maca; PAS/PAC Sensor Protein; RND Family Efflux Transporter

Number of amino acids: Translated: 606; Mature: 605

Protein sequence:

>606_residues
MSQSSRPRRRQNRLGWGIGILVVIGVLVAGFFLFNRDQPSNVRLNYALTRPQRSPISATVNASGSIQPQQVIDLTFASSG
LISEVLVQVGDQVAAGQVLARLDTRDLELRVDQAAAQLAQAQASLDRLRAGPSAAEVAAAEAQLAQAQAQLRQTTGNVTE
QDLAAARAQVEQARANLERVLGGPKASEVAQAQAQVDQAAAALQAQRDSLSAAKTRAESQLLQAANTLRDRQAEYSRIYN
ENREREQQLARFGQSLPQSALDTEAAALRAVENAEEQMRQAQVAYEQARQAEITGIAQAEAQLRSAQANLERILAGADPD
QVAAARAQLAQAEANLNKLLGDQRAGSLAAANAAVASAQANLQRITAPPSEADLASAEAQVASARASLAQAQLALERATL
TAPIAGVVAEVNLEVGEFYNAARPAVVLADLSGYYVDVTVDEIDVAQIAVGQPVILVLDALPNLDLRGTVARINPLSIVQ
SGVTAYTVRIVTDDPPASVRPGMSASADIIVAEKSEALVVPRRAIRAEGGQFFVDVTTDPALCSLDIAQRPLQPPLQAVA
VQTGLSNEQIIEISSGNIDENSCVYVPGVDARIDLFSGPPPGVRGR

Sequences:

>Translated_606_residues
MSQSSRPRRRQNRLGWGIGILVVIGVLVAGFFLFNRDQPSNVRLNYALTRPQRSPISATVNASGSIQPQQVIDLTFASSG
LISEVLVQVGDQVAAGQVLARLDTRDLELRVDQAAAQLAQAQASLDRLRAGPSAAEVAAAEAQLAQAQAQLRQTTGNVTE
QDLAAARAQVEQARANLERVLGGPKASEVAQAQAQVDQAAAALQAQRDSLSAAKTRAESQLLQAANTLRDRQAEYSRIYN
ENREREQQLARFGQSLPQSALDTEAAALRAVENAEEQMRQAQVAYEQARQAEITGIAQAEAQLRSAQANLERILAGADPD
QVAAARAQLAQAEANLNKLLGDQRAGSLAAANAAVASAQANLQRITAPPSEADLASAEAQVASARASLAQAQLALERATL
TAPIAGVVAEVNLEVGEFYNAARPAVVLADLSGYYVDVTVDEIDVAQIAVGQPVILVLDALPNLDLRGTVARINPLSIVQ
SGVTAYTVRIVTDDPPASVRPGMSASADIIVAEKSEALVVPRRAIRAEGGQFFVDVTTDPALCSLDIAQRPLQPPLQAVA
VQTGLSNEQIIEISSGNIDENSCVYVPGVDARIDLFSGPPPGVRGR
>Mature_605_residues
SQSSRPRRRQNRLGWGIGILVVIGVLVAGFFLFNRDQPSNVRLNYALTRPQRSPISATVNASGSIQPQQVIDLTFASSGL
ISEVLVQVGDQVAAGQVLARLDTRDLELRVDQAAAQLAQAQASLDRLRAGPSAAEVAAAEAQLAQAQAQLRQTTGNVTEQ
DLAAARAQVEQARANLERVLGGPKASEVAQAQAQVDQAAAALQAQRDSLSAAKTRAESQLLQAANTLRDRQAEYSRIYNE
NREREQQLARFGQSLPQSALDTEAAALRAVENAEEQMRQAQVAYEQARQAEITGIAQAEAQLRSAQANLERILAGADPDQ
VAAARAQLAQAEANLNKLLGDQRAGSLAAANAAVASAQANLQRITAPPSEADLASAEAQVASARASLAQAQLALERATLT
APIAGVVAEVNLEVGEFYNAARPAVVLADLSGYYVDVTVDEIDVAQIAVGQPVILVLDALPNLDLRGTVARINPLSIVQS
GVTAYTVRIVTDDPPASVRPGMSASADIIVAEKSEALVVPRRAIRAEGGQFFVDVTTDPALCSLDIAQRPLQPPLQAVAV
QTGLSNEQIIEISSGNIDENSCVYVPGVDARIDLFSGPPPGVRGR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Inner Membrane-Bound [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 63929; Mature: 63798

Theoretical pI: Translated: 4.59; Mature: 4.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQSSRPRRRQNRLGWGIGILVVIGVLVAGFFLFNRDQPSNVRLNYALTRPQRSPISATV
CCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCEEEE
NASGSIQPQQVIDLTFASSGLISEVLVQVGDQVAAGQVLARLDTRDLELRVDQAAAQLAQ
CCCCCCCHHHHEEEEECCCCHHHHHHHHHCCCHHHHHHHHHCCCCCCEEEHHHHHHHHHH
AQASLDRLRAGPSAAEVAAAEAQLAQAQAQLRQTTGNVTEQDLAAARAQVEQARANLERV
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
LGGPKASEVAQAQAQVDQAAAALQAQRDSLSAAKTRAESQLLQAANTLRDRQAEYSRIYN
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
ENREREQQLARFGQSLPQSALDTEAAALRAVENAEEQMRQAQVAYEQARQAEITGIAQAE
CCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AQLRSAQANLERILAGADPDQVAAARAQLAQAEANLNKLLGDQRAGSLAAANAAVASAQA
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
NLQRITAPPSEADLASAEAQVASARASLAQAQLALERATLTAPIAGVVAEVNLEVGEFYN
HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECHHHHHHC
AARPAVVLADLSGYYVDVTVDEIDVAQIAVGQPVILVLDALPNLDLRGTVARINPLSIVQ
CCCCEEEEEECCCEEEEEEECCCCHHHHCCCCCCEEEEECCCCCCCCCEEEECCHHHHHH
SGVTAYTVRIVTDDPPASVRPGMSASADIIVAEKSEALVVPRRAIRAEGGQFFVDVTTDP
CCCEEEEEEEEECCCCCCCCCCCCCCCCEEEECCCCEEECCHHHHHCCCCEEEEEECCCC
ALCSLDIAQRPLQPPLQAVAVQTGLSNEQIIEISSGNIDENSCVYVPGVDARIDLFSGPP
CEEEEHHHHCCCCCHHHHHHHHCCCCCCEEEEECCCCCCCCCEEEECCCCCEEEECCCCC
PGVRGR
CCCCCC
>Mature Secondary Structure 
SQSSRPRRRQNRLGWGIGILVVIGVLVAGFFLFNRDQPSNVRLNYALTRPQRSPISATV
CCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCEEEE
NASGSIQPQQVIDLTFASSGLISEVLVQVGDQVAAGQVLARLDTRDLELRVDQAAAQLAQ
CCCCCCCHHHHEEEEECCCCHHHHHHHHHCCCHHHHHHHHHCCCCCCEEEHHHHHHHHHH
AQASLDRLRAGPSAAEVAAAEAQLAQAQAQLRQTTGNVTEQDLAAARAQVEQARANLERV
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
LGGPKASEVAQAQAQVDQAAAALQAQRDSLSAAKTRAESQLLQAANTLRDRQAEYSRIYN
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
ENREREQQLARFGQSLPQSALDTEAAALRAVENAEEQMRQAQVAYEQARQAEITGIAQAE
CCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AQLRSAQANLERILAGADPDQVAAARAQLAQAEANLNKLLGDQRAGSLAAANAAVASAQA
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
NLQRITAPPSEADLASAEAQVASARASLAQAQLALERATLTAPIAGVVAEVNLEVGEFYN
HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECHHHHHHC
AARPAVVLADLSGYYVDVTVDEIDVAQIAVGQPVILVLDALPNLDLRGTVARINPLSIVQ
CCCCEEEEEECCCEEEEEEECCCCHHHHCCCCCCEEEEECCCCCCCCCEEEECCHHHHHH
SGVTAYTVRIVTDDPPASVRPGMSASADIIVAEKSEALVVPRRAIRAEGGQFFVDVTTDP
CCCEEEEEEEEECCCCCCCCCCCCCCCCEEEECCCCEEECCHHHHHCCCCEEEEEECCCC
ALCSLDIAQRPLQPPLQAVAVQTGLSNEQIIEISSGNIDENSCVYVPGVDARIDLFSGPP
CEEEEHHHHCCCCCHHHHHHHHCCCCCCEEEEECCCCCCCCCEEEECCCCCEEEECCCCC
PGVRGR
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA