| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222524278
Identifier: 222524278
GI number: 222524278
Start: 1278636
End: 1279295
Strand: Reverse
Name: 222524278
Synonym: Chy400_1001
Alternate gene names: NA
Gene position: 1279295-1278636 (Counterclockwise)
Preceding gene: 222524284
Following gene: 222524274
Centisome position: 24.28
GC content: 54.85
Gene sequence:
>660_bases ATGGAGTACGAACTGACCAACCAACGCACTCTGAGCCGCCTTGATCAGTACATTTTGTTCTACTGGCTCATCTCGTTGTT GATCGGGATTCCGATCCTGGGGGATTGGCTCAGAAGCTGGAACGTTCCGGCAACGCTGGCCAATCCCTGGTTTGTGATAT TCTTACTGGTCAGCTTTGCCCTCAGTCAGGTGTTATACGTGCTGGTCGCCCGTCACGATGGGCGACCATTTCTGTGGGGG CCAACGATCATTTTCAGCATCGGCAATGGCGTCATCGAAACATTTGCCTTTGCGACCGTATACCGGCTAGGCGAATGGAT CGGCAATGGGTTAGCCGGTCAGTTCTGGCCGACGCTGGTTGGCCCGCTGGGCTTTGCTGTCGGCTTCACCGCCTTTGTCA TTTATGGTGGTGTTATCCATGGACTATTCTGGTTGCCGTACCTCCCGCCTCACCTTGACGACTCGCCGCAATCGATGCGG ATTCGCAAGTTGCGCCCCCTCGCTGAAATGGCGCTTGTGTTGGGTTGGAGCCTCTGCCTCTACCTGTATCAGGACATCTG GACGGTTATTTTTATTCACATCCTCGTTGATCTCGGCTTGATGTTACGGGTGCGACCGCCGGTCTTTCTGGGTGTGAGCC GACAAGGGGTGGTCGAATAG
Upstream 100 bases:
>100_bases TTCACTTCTCCTCTAGGCAAAGTAGCTGGATTATGGTAGTATATTGCATATAAACAACTCTTATTTCTTTCAATCAAAAA CAAAACGAGGTACTATTTTT
Downstream 100 bases:
>100_bases CGGCTGAGATACTTGTGCACGAGACAAGCGCAAACGTACCGAGGTGCCAAGCCAGATGTCATTGTTGTCCACAGGTACGG GGGTATGTGGTCGTAGCCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 219; Mature: 219
Protein sequence:
>219_residues MEYELTNQRTLSRLDQYILFYWLISLLIGIPILGDWLRSWNVPATLANPWFVIFLLVSFALSQVLYVLVARHDGRPFLWG PTIIFSIGNGVIETFAFATVYRLGEWIGNGLAGQFWPTLVGPLGFAVGFTAFVIYGGVIHGLFWLPYLPPHLDDSPQSMR IRKLRPLAEMALVLGWSLCLYLYQDIWTVIFIHILVDLGLMLRVRPPVFLGVSRQGVVE
Sequences:
>Translated_219_residues MEYELTNQRTLSRLDQYILFYWLISLLIGIPILGDWLRSWNVPATLANPWFVIFLLVSFALSQVLYVLVARHDGRPFLWG PTIIFSIGNGVIETFAFATVYRLGEWIGNGLAGQFWPTLVGPLGFAVGFTAFVIYGGVIHGLFWLPYLPPHLDDSPQSMR IRKLRPLAEMALVLGWSLCLYLYQDIWTVIFIHILVDLGLMLRVRPPVFLGVSRQGVVE >Mature_219_residues MEYELTNQRTLSRLDQYILFYWLISLLIGIPILGDWLRSWNVPATLANPWFVIFLLVSFALSQVLYVLVARHDGRPFLWG PTIIFSIGNGVIETFAFATVYRLGEWIGNGLAGQFWPTLVGPLGFAVGFTAFVIYGGVIHGLFWLPYLPPHLDDSPQSMR IRKLRPLAEMALVLGWSLCLYLYQDIWTVIFIHILVDLGLMLRVRPPVFLGVSRQGVVE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24940; Mature: 24940
Theoretical pI: Translated: 7.66; Mature: 7.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEYELTNQRTLSRLDQYILFYWLISLLIGIPILGDWLRSWNVPATLANPWFVIFLLVSFA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCHHHHHHHHHHHH LSQVLYVLVARHDGRPFLWGPTIIFSIGNGVIETFAFATVYRLGEWIGNGLAGQFWPTLV HHHHHHHHHHHCCCCCEEECCHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH GPLGFAVGFTAFVIYGGVIHGLFWLPYLPPHLDDSPQSMRIRKLRPLAEMALVLGWSLCL HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH YLYQDIWTVIFIHILVDLGLMLRVRPPVFLGVSRQGVVE HHHHHHHHHHHHHHHHHHHHHHEECCCEEECCCCCCCCC >Mature Secondary Structure MEYELTNQRTLSRLDQYILFYWLISLLIGIPILGDWLRSWNVPATLANPWFVIFLLVSFA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCHHHHHHHHHHHH LSQVLYVLVARHDGRPFLWGPTIIFSIGNGVIETFAFATVYRLGEWIGNGLAGQFWPTLV HHHHHHHHHHHCCCCCEEECCHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH GPLGFAVGFTAFVIYGGVIHGLFWLPYLPPHLDDSPQSMRIRKLRPLAEMALVLGWSLCL HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH YLYQDIWTVIFIHILVDLGLMLRVRPPVFLGVSRQGVVE HHHHHHHHHHHHHHHHHHHHHHEECCCEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA