| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is yaiP [C]
Identifier: 222524244
GI number: 222524244
Start: 1233612
End: 1234817
Strand: Reverse
Name: yaiP [C]
Synonym: Chy400_0966
Alternate gene names: 222524244
Gene position: 1234817-1233612 (Counterclockwise)
Preceding gene: 222524245
Following gene: 222524237
Centisome position: 23.44
GC content: 58.54
Gene sequence:
>1206_bases ATGATGTCGTTGATGTGGGGCTTGTTGACGGTGATCTTCTGGGTCAGCGGGATTGTGCTGGCAGGGATGGTGGCTTATCT TCTGCTGCTCACCGGAGCAGCCTTTTTCGCCCGGCGCACAACGACGCTTCGTCCGCATCCCACCACGCGCTTTGTGATCA TGATACCGGCGCACAATGAAGAGCGCCTGTTGCCCGATCTGCTGACTAATCTGCAACAACTCGACTATCCGCGTGAACTC TACACTGTACACGTCGTTGCCGATAACTGTTCGGATCAGACTGCCGCAGTTGCTGCCGCGCATGGAGCCATCGTCCACGA ACGATTCGATCAGACGCTGCGTGGCAAGGGGTACGCTTTGGAATGGTTGTTGCAGCAAATCTGGTTGCGCCAGGAACCGC ACGATGCGGTCGTCATTCTCGATGCCGACACGGTGGTCTCGACCAATTTTCTACGGGTGATGGATGCCCGGCTGGCGCAG GGTGAACGAGTTATCCAGGCTTACTATGCGGTACGTCAACCCGAAGGCGCATGGAGTGCCGGAATCCGTGCGGTGGCCTT GATTGTCCTGCACTACCTCCGCCCTCTGGGCCGCATGGTGCTTGGTGGCTCGACCGGCCTGAAGGGCAATGGGATGGTCT TTGCCGCCGACATTCTACGGCAGCAGCGCTGGACAGCCTCGCTGACGGAAGATATTGAGTACCACATGCGGCTGATTCTG GCGGGTGAGCGCGCCATGTTTGCGCCCGATACCGTGGTATGGGCCGAGATGCCCGATAGTCTGAAGTCTGCCCAAACCCA AAATGAGCGCTGGGAGCGCGGACGGATGGAGATGGTGCGCCATTATGTGCCGCAACTGCTGCGTGAAGGGTTGCGCCGAC GAAGCTTTTTGCTGATCGATGCTGCCATCGAGCAACTGATTCCACCCTTTTCGGTGGTTACCGGAGCCAGTGTATTGCTC TTGCTGATCGCCCTCGTCCTGGGTGACCCGGCAGCACTCGCGCTGGCCGGTTTTGTGTTGCTTGGTCAGGTTGTGTACAT TCTCAGTGGGCTGATCCTGGTGAAGGCACCGTGGCCGGTTTACCGCTCGTTACTCTTCACCCCGCTCTTTGTAATCTGGA AGCTGTGGCTCTACATCCGGCTGCTACTCGGCATCAAACCGCGTGACTGGATTCGGACGGCCCGGAATCGGGCACCGCAT TCGTGA
Upstream 100 bases:
>100_bases TGAACCTCGATCATTATGCCGTGCGTCTGACCGATTTTCTCTACGATACGCTGACCGAAGTCGGTGTTGAGCCGCTGTCG GGTAAGCATAAGGAGCGACT
Downstream 100 bases:
>100_bases TGGTAACAGATACCTGTTTGAAACTGGAAATGACACCTGTGTCAGAAGAGCGCGGGTGTGCGACAGCCGACGCGGGACAA TGGTGGCTGACCACCATGCC
Product: glycosyl transferase family 2 protein
Products: NA
Alternate protein names: Glycosyl Transferase Family Protein; Glycosyltransferase Group 2 Family Protein; N-Acetylglucosaminyltransferase; Glycosyltransferase; Glycosyl Transferase; Glycosyl Transferase Group 2 Family; Family 2 Glycosyl Transferase; Glycosyl Transferase Family 2 Protein; Capsular Polysaccharide Biosynthesis Glycosyl Transferase; Capsule-Related Protein; Cell Wall Biosynthesis Glycosyltransferase-Like Protein; Group 2 Family Glycosyl Transferase; Glycoside Transferase Family 2 Protein; Glucosaminyltransferase
Number of amino acids: Translated: 401; Mature: 401
Protein sequence:
>401_residues MMSLMWGLLTVIFWVSGIVLAGMVAYLLLLTGAAFFARRTTTLRPHPTTRFVIMIPAHNEERLLPDLLTNLQQLDYPREL YTVHVVADNCSDQTAAVAAAHGAIVHERFDQTLRGKGYALEWLLQQIWLRQEPHDAVVILDADTVVSTNFLRVMDARLAQ GERVIQAYYAVRQPEGAWSAGIRAVALIVLHYLRPLGRMVLGGSTGLKGNGMVFAADILRQQRWTASLTEDIEYHMRLIL AGERAMFAPDTVVWAEMPDSLKSAQTQNERWERGRMEMVRHYVPQLLREGLRRRSFLLIDAAIEQLIPPFSVVTGASVLL LLIALVLGDPAALALAGFVLLGQVVYILSGLILVKAPWPVYRSLLFTPLFVIWKLWLYIRLLLGIKPRDWIRTARNRAPH S
Sequences:
>Translated_401_residues MMSLMWGLLTVIFWVSGIVLAGMVAYLLLLTGAAFFARRTTTLRPHPTTRFVIMIPAHNEERLLPDLLTNLQQLDYPREL YTVHVVADNCSDQTAAVAAAHGAIVHERFDQTLRGKGYALEWLLQQIWLRQEPHDAVVILDADTVVSTNFLRVMDARLAQ GERVIQAYYAVRQPEGAWSAGIRAVALIVLHYLRPLGRMVLGGSTGLKGNGMVFAADILRQQRWTASLTEDIEYHMRLIL AGERAMFAPDTVVWAEMPDSLKSAQTQNERWERGRMEMVRHYVPQLLREGLRRRSFLLIDAAIEQLIPPFSVVTGASVLL LLIALVLGDPAALALAGFVLLGQVVYILSGLILVKAPWPVYRSLLFTPLFVIWKLWLYIRLLLGIKPRDWIRTARNRAPH S >Mature_401_residues MMSLMWGLLTVIFWVSGIVLAGMVAYLLLLTGAAFFARRTTTLRPHPTTRFVIMIPAHNEERLLPDLLTNLQQLDYPREL YTVHVVADNCSDQTAAVAAAHGAIVHERFDQTLRGKGYALEWLLQQIWLRQEPHDAVVILDADTVVSTNFLRVMDARLAQ GERVIQAYYAVRQPEGAWSAGIRAVALIVLHYLRPLGRMVLGGSTGLKGNGMVFAADILRQQRWTASLTEDIEYHMRLIL AGERAMFAPDTVVWAEMPDSLKSAQTQNERWERGRMEMVRHYVPQLLREGLRRRSFLLIDAAIEQLIPPFSVVTGASVLL LLIALVLGDPAALALAGFVLLGQVVYILSGLILVKAPWPVYRSLLFTPLFVIWKLWLYIRLLLGIKPRDWIRTARNRAPH S
Specific function: Unknown
COG id: COG1215
COG function: function code M; Glycosyltransferases, probably involved in cell wall biogenesis
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45243; Mature: 45243
Theoretical pI: Translated: 9.86; Mature: 9.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMSLMWGLLTVIFWVSGIVLAGMVAYLLLLTGAAFFARRTTTLRPHPTTRFVIMIPAHNE CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCC ERLLPDLLTNLQQLDYPRELYTVHVVADNCSDQTAAVAAAHGAIVHERFDQTLRGKGYAL CHHHHHHHHHHHHCCCCCHHEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHH EWLLQQIWLRQEPHDAVVILDADTVVSTNFLRVMDARLAQGERVIQAYYAVRQPEGAWSA HHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH GIRAVALIVLHYLRPLGRMVLGGSTGLKGNGMVFAADILRQQRWTASLTEDIEYHMRLIL HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHE AGERAMFAPDTVVWAEMPDSLKSAQTQNERWERGRMEMVRHYVPQLLREGLRRRSFLLID ECCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAIEQLIPPFSVVTGASVLLLLIALVLGDPAALALAGFVLLGQVVYILSGLILVKAPWPV HHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHEEECCCHH YRSLLFTPLFVIWKLWLYIRLLLGIKPRDWIRTARNRAPHS HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCC >Mature Secondary Structure MMSLMWGLLTVIFWVSGIVLAGMVAYLLLLTGAAFFARRTTTLRPHPTTRFVIMIPAHNE CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCC ERLLPDLLTNLQQLDYPRELYTVHVVADNCSDQTAAVAAAHGAIVHERFDQTLRGKGYAL CHHHHHHHHHHHHCCCCCHHEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHH EWLLQQIWLRQEPHDAVVILDADTVVSTNFLRVMDARLAQGERVIQAYYAVRQPEGAWSA HHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH GIRAVALIVLHYLRPLGRMVLGGSTGLKGNGMVFAADILRQQRWTASLTEDIEYHMRLIL HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHE AGERAMFAPDTVVWAEMPDSLKSAQTQNERWERGRMEMVRHYVPQLLREGLRRRSFLLID ECCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAIEQLIPPFSVVTGASVLLLLIALVLGDPAALALAGFVLLGQVVYILSGLILVKAPWPV HHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHEEECCCHH YRSLLFTPLFVIWKLWLYIRLLLGIKPRDWIRTARNRAPHS HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA