| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222524225
Identifier: 222524225
GI number: 222524225
Start: 1196554
End: 1196832
Strand: Reverse
Name: 222524225
Synonym: Chy400_0946
Alternate gene names: NA
Gene position: 1196832-1196554 (Counterclockwise)
Preceding gene: 222524226
Following gene: 222524224
Centisome position: 22.71
GC content: 56.27
Gene sequence:
>279_bases ATGGTCACTGCCTTCGTATTTATCACCTGTGAACCACAACGCATCAGCGATATTGCCCAGGAAGTCGCCGAACTTCCCAA CGTCGCCGAAGTCTACTCCGTCACCGGTGACTACGACATCATCGCGGTGCTGCGGGTCAACGCTTACGAATCGCTTGATG AAGCTGTTCCTGGTGGTATCGCCCGTATTCCTGGTGTGCGCCACACCACAACCGTGCTCGCGTTCCGCCGCTACTCACGG CGTGACCTTGAAGCCGGTTTCGATATTGGCCTGTCGTAA
Upstream 100 bases:
>100_bases TGAACCTTTTTAGGCCAGTATCGACGACAGCAGCACGTACAGGTAGAATCTGGTATCATTAGCTTACCTGTCCTCGGATC CGTCATTCAGGAGTGCGCTC
Downstream 100 bases:
>100_bases CAACATCACAAATCTGTCACATGATTGCAATGCTATGCTCTTGACGATGCGACAGAGCATATGCTATAATTCGCACAATA GTTCGAGATCGTGCGGGAAA
Product: AsnC family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator AsnC Family; Transcriptional Regulator; Transcription Regulator Protein; Asnc Family Transcriptional Regulator; AsnC/Lrp Family Regulatory Protein; Transcriptional Regulator Asnc Family; AsnC/Lrp Family Transcriptional Regulator; Transcription Regulator; AsnC-Type Transcriptional Regulator; Lrp/AsnC Family Transcriptional Regulator
Number of amino acids: Translated: 92; Mature: 92
Protein sequence:
>92_residues MVTAFVFITCEPQRISDIAQEVAELPNVAEVYSVTGDYDIIAVLRVNAYESLDEAVPGGIARIPGVRHTTTVLAFRRYSR RDLEAGFDIGLS
Sequences:
>Translated_92_residues MVTAFVFITCEPQRISDIAQEVAELPNVAEVYSVTGDYDIIAVLRVNAYESLDEAVPGGIARIPGVRHTTTVLAFRRYSR RDLEAGFDIGLS >Mature_92_residues MVTAFVFITCEPQRISDIAQEVAELPNVAEVYSVTGDYDIIAVLRVNAYESLDEAVPGGIARIPGVRHTTTVLAFRRYSR RDLEAGFDIGLS
Specific function: Unknown
COG id: COG1522
COG function: function code K; Transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10118; Mature: 10118
Theoretical pI: Translated: 4.39; Mature: 4.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVTAFVFITCEPQRISDIAQEVAELPNVAEVYSVTGDYDIIAVLRVNAYESLDEAVPGGI CCEEEEEEEECCHHHHHHHHHHHHCCCHHHEEECCCCCEEEEEEEECCHHHHHHHCCCCC ARIPGVRHTTTVLAFRRYSRRDLEAGFDIGLS HHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MVTAFVFITCEPQRISDIAQEVAELPNVAEVYSVTGDYDIIAVLRVNAYESLDEAVPGGI CCEEEEEEEECCHHHHHHHHHHHHCCCHHHEEECCCCCEEEEEEEECCHHHHHHHCCCCC ARIPGVRHTTTVLAFRRYSRRDLEAGFDIGLS HHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA