| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is glnA [H]
Identifier: 222524195
GI number: 222524195
Start: 1156258
End: 1157682
Strand: Reverse
Name: glnA [H]
Synonym: Chy400_0916
Alternate gene names: 222524195
Gene position: 1157682-1156258 (Counterclockwise)
Preceding gene: 222524197
Following gene: 222524193
Centisome position: 21.97
GC content: 56.98
Gene sequence:
>1425_bases ATGACCGAGCTACGCGACTTTCTCGAAATCCCCTACGAGCAACTGGAAGAGCTGAATCTGAGTGTTAAGCGGCAGCGTCT GGCCCGCGTTTCGCCGGATGTGATGCGCGAGGAGCGGATGCGCTATTTGACCGACGAGCGGCGGATTAAGGCGGTGACCG TCTGTTTTACCGACCTCGAAGGCCGGCTGCATATGCTCGATTACGACAAGAAGTTTCTGCTGTCCTCCGCCGATAATCTG ACCTTTGACGGTTCGTCGGTGCGAGGCTTTTCGGTGCAGGCCGAGTCGGATTTGCGCCTGGCGATTGACTGGTCGGCTTT TTACTGGTTGCCGGCAGATATTTTTGGCCCCGGTAAGGTGCTGGTCTTTGGGTTTGTGTTGAATCAGGACGGTAGCCCCT ACGAGGCTGATATGCGGGGGCGGTTGCACCGGTATGTGAATGAGCTGTATCAGCGCGATGGGCTGACCTGCAATGTGGCT GCTGAGATTGAGGGCTTCCTGTTTAAGGGGCGCAATGCCGAGCAGCGCTTCCGCGAGACCGGTGAGTTTACGATGGTCAG TACCGGTGGTTATTACCACTCGTTGCCGGGTGATCCGCTGCGCCAGTTCATCGATATGGCTGCCGAAGCGCAGCGGGCGA TGGGGTTTGAGAATGAGAAGGATCACCCTGAAGTGGCGCCGTCACAGTTTGAGATGAATTATAGCTATACCGAGGCAACT ATCGCCGCTGACCAGATTCTGCTTTATAAGTTGATCTGTCGCCAGGTGGCGAGCAAGCTGGATATGACGGCCTGCTTCCT GCCGAAGCCGGTGACCGGGGTGAATGGCAATGGCATGCACACCAATATCTCGTTGTCGCGCCACGGCGAGAATCTCTTCT ACGATGCGAATGGCCCGGAACGGCTTTCCGAGCTGGCCTGGAGCTTTATTGACCGTATTCTGAACAGTGGTCAGGAACTC TGCCTGATCCTGAATTCGAGCGTCAATGCCTATCGCCGGCTAGACCCACACTTCGAGGCACCAAACCAGATCAAGGCGTC ACCTACCGACCGCGGTTCGATGATCCGGATTCCGATTGGTAATGCCCGTTCGGCCCGGATTGAAGTGCGCTCGATTGCGC CCGATGCCAATCCCTATATGGCGATTTATGCGCTGCTGCGCACCGGTCTCGAAGGGCCGCTGCCGACGACCGATGTTCGC AACGGCACAGCAACGCTTCCCGATAACATCTACGACGCTATCACCAATTTCCGCCAGAGCACCTTCCTGGCCAGCATTCT CGGTGAAGGGGTGCACAGCCGTTTCGCCGACCTGAAGACAACCGTCGCCGACCGTTGTCCACGCAAGCTCGGTACGTTGA TCAAACGCGCCGAGGTGCAGTTCCACCACGAAGTCACCAATCAGTACCTGTGGAGCCGATTCTAA
Upstream 100 bases:
>100_bases TCGGTTTGGTTGCAGGGTTTTGTCAACCGTTGCTGCTGTTCGGAGTATAATACGACCCAACAACGTTACCGTTGTCTGGA GTAAAGAAAAGGAAGCCACC
Downstream 100 bases:
>100_bases GCACCGGCCCCACCCCGAATCGACCTCGTCCGGTGAGGGAGCGCAATGGCGCGCGACCTCTTTACAATGCCACAATTGCC GCTGCCAGTACCAGACAATA
Product: glutamine synthetase catalytic subunit
Products: NA
Alternate protein names: Glutamate--ammonia ligase [H]
Number of amino acids: Translated: 474; Mature: 473
Protein sequence:
>474_residues MTELRDFLEIPYEQLEELNLSVKRQRLARVSPDVMREERMRYLTDERRIKAVTVCFTDLEGRLHMLDYDKKFLLSSADNL TFDGSSVRGFSVQAESDLRLAIDWSAFYWLPADIFGPGKVLVFGFVLNQDGSPYEADMRGRLHRYVNELYQRDGLTCNVA AEIEGFLFKGRNAEQRFRETGEFTMVSTGGYYHSLPGDPLRQFIDMAAEAQRAMGFENEKDHPEVAPSQFEMNYSYTEAT IAADQILLYKLICRQVASKLDMTACFLPKPVTGVNGNGMHTNISLSRHGENLFYDANGPERLSELAWSFIDRILNSGQEL CLILNSSVNAYRRLDPHFEAPNQIKASPTDRGSMIRIPIGNARSARIEVRSIAPDANPYMAIYALLRTGLEGPLPTTDVR NGTATLPDNIYDAITNFRQSTFLASILGEGVHSRFADLKTTVADRCPRKLGTLIKRAEVQFHHEVTNQYLWSRF
Sequences:
>Translated_474_residues MTELRDFLEIPYEQLEELNLSVKRQRLARVSPDVMREERMRYLTDERRIKAVTVCFTDLEGRLHMLDYDKKFLLSSADNL TFDGSSVRGFSVQAESDLRLAIDWSAFYWLPADIFGPGKVLVFGFVLNQDGSPYEADMRGRLHRYVNELYQRDGLTCNVA AEIEGFLFKGRNAEQRFRETGEFTMVSTGGYYHSLPGDPLRQFIDMAAEAQRAMGFENEKDHPEVAPSQFEMNYSYTEAT IAADQILLYKLICRQVASKLDMTACFLPKPVTGVNGNGMHTNISLSRHGENLFYDANGPERLSELAWSFIDRILNSGQEL CLILNSSVNAYRRLDPHFEAPNQIKASPTDRGSMIRIPIGNARSARIEVRSIAPDANPYMAIYALLRTGLEGPLPTTDVR NGTATLPDNIYDAITNFRQSTFLASILGEGVHSRFADLKTTVADRCPRKLGTLIKRAEVQFHHEVTNQYLWSRF >Mature_473_residues TELRDFLEIPYEQLEELNLSVKRQRLARVSPDVMREERMRYLTDERRIKAVTVCFTDLEGRLHMLDYDKKFLLSSADNLT FDGSSVRGFSVQAESDLRLAIDWSAFYWLPADIFGPGKVLVFGFVLNQDGSPYEADMRGRLHRYVNELYQRDGLTCNVAA EIEGFLFKGRNAEQRFRETGEFTMVSTGGYYHSLPGDPLRQFIDMAAEAQRAMGFENEKDHPEVAPSQFEMNYSYTEATI AADQILLYKLICRQVASKLDMTACFLPKPVTGVNGNGMHTNISLSRHGENLFYDANGPERLSELAWSFIDRILNSGQELC LILNSSVNAYRRLDPHFEAPNQIKASPTDRGSMIRIPIGNARSARIEVRSIAPDANPYMAIYALLRTGLEGPLPTTDVRN GTATLPDNIYDAITNFRQSTFLASILGEGVHSRFADLKTTVADRCPRKLGTLIKRAEVQFHHEVTNQYLWSRF
Specific function: Unknown
COG id: COG0174
COG function: function code E; Glutamine synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glutamine synthetase family [H]
Homologues:
Organism=Escherichia coli, GI1790301, Length=419, Percent_Identity=29.1169451073986, Blast_Score=135, Evalue=5e-33, Organism=Escherichia coli, GI87081870, Length=353, Percent_Identity=28.6118980169972, Blast_Score=116, Evalue=3e-27,
Paralogues:
None
Copy number: 420 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1040 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 15324 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 8,000 Molecules/Cell In: Glucose minimal medi
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008147 - InterPro: IPR014746 - InterPro: IPR008146 - InterPro: IPR004809 - InterPro: IPR001637 [H]
Pfam domain/function: PF00120 Gln-synt_C; PF03951 Gln-synt_N [H]
EC number: =6.3.1.2 [H]
Molecular weight: Translated: 53821; Mature: 53689
Theoretical pI: Translated: 6.04; Mature: 6.04
Prosite motif: PS00180 GLNA_1 ; PS00181 GLNA_ATP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTELRDFLEIPYEQLEELNLSVKRQRLARVSPDVMREERMRYLTDERRIKAVTVCFTDLE CCCHHHHHHCCHHHHHHHCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCEEEEEEEEECCC GRLHMLDYDKKFLLSSADNLTFDGSSVRGFSVQAESDLRLAIDWSAFYWLPADIFGPGKV CEEEEECCCHHHHHCCCCCCEECCCCCCEEEEECCCCCEEEEEECEEEEECCCCCCCCEE LVFGFVLNQDGSPYEADMRGRLHRYVNELYQRDGLTCNVAAEIEGFLFKGRNAEQRFRET EEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCEEEECCCCHHHHHHHC GEFTMVSTGGYYHSLPGDPLRQFIDMAAEAQRAMGFENEKDHPEVAPSQFEMNYSYTEAT CCEEEEECCCEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCHHHHH IAADQILLYKLICRQVASKLDMTACFLPKPVTGVNGNGMHTNISLSRHGENLFYDANGPE HHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCEEEEEEEEECCCEEEECCCCHH RLSELAWSFIDRILNSGQELCLILNSSVNAYRRLDPHFEAPNQIKASPTDRGSMIRIPIG HHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECC NARSARIEVRSIAPDANPYMAIYALLRTGLEGPLPTTDVRNGTATLPDNIYDAITNFRQS CCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH TFLASILGEGVHSRFADLKTTVADRCPRKLGTLIKRAEVQFHHEVTNQYLWSRF HHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TELRDFLEIPYEQLEELNLSVKRQRLARVSPDVMREERMRYLTDERRIKAVTVCFTDLE CCHHHHHHCCHHHHHHHCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCEEEEEEEEECCC GRLHMLDYDKKFLLSSADNLTFDGSSVRGFSVQAESDLRLAIDWSAFYWLPADIFGPGKV CEEEEECCCHHHHHCCCCCCEECCCCCCEEEEECCCCCEEEEEECEEEEECCCCCCCCEE LVFGFVLNQDGSPYEADMRGRLHRYVNELYQRDGLTCNVAAEIEGFLFKGRNAEQRFRET EEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCEEEECCCCHHHHHHHC GEFTMVSTGGYYHSLPGDPLRQFIDMAAEAQRAMGFENEKDHPEVAPSQFEMNYSYTEAT CCEEEEECCCEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCHHHHH IAADQILLYKLICRQVASKLDMTACFLPKPVTGVNGNGMHTNISLSRHGENLFYDANGPE HHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCEEEEEEEEECCCEEEECCCCHH RLSELAWSFIDRILNSGQELCLILNSSVNAYRRLDPHFEAPNQIKASPTDRGSMIRIPIG HHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECC NARSARIEVRSIAPDANPYMAIYALLRTGLEGPLPTTDVRNGTATLPDNIYDAITNFRQS CCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH TFLASILGEGVHSRFADLKTTVADRCPRKLGTLIKRAEVQFHHEVTNQYLWSRF HHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2906311; 2565853; 9384377; 11719184 [H]