Definition Chloroflexus sp. Y-400-fl chromosome, complete genome.
Accession NC_012032
Length 5,268,950

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The map label for this gene is 222524119

Identifier: 222524119

GI number: 222524119

Start: 1049048

End: 1051204

Strand: Reverse

Name: 222524119

Synonym: Chy400_0835

Alternate gene names: NA

Gene position: 1051204-1049048 (Counterclockwise)

Preceding gene: 222524120

Following gene: 222524118

Centisome position: 19.95

GC content: 56.98

Gene sequence:

>2157_bases
ATGTCTGATCTGAAACAACCTGATAGTGTCGGTGCAACGCCAACCAGTGACGAGATCGATCAGGAAAAGGTTCGCGAGTA
TCTCGAACAGGAAGAGAAACCAACCCGGTCGTTGGGTCGCTTTTGGGGTATCGTTGTGACCCTGATTGCGGTCGGCATGG
CCGGTTTTTATATCTACACCGCCGGTACGCTGCCGGCACCGGTGCAGTGGCAACGCGGAATCTATGTGATGTTGACCTAT
ATTCTGGTGTTGCTGCTGTACCCCGCTGTTGGCAAGAAGAGTCCCTTGCAACCGTGGCTGTCCGGTCTGGCTGAGCGATT
GCCGGGGCCGCTGCGCGCAGTGATTGTGCCACGCGGCGGGCCGACAATTCTCGATCTGGCGCTGATCGTCATCACGGTCA
TCGTTGTTGGTTACTTCATCATTAACTATCCGGCATTGCAACGGCGGGCCGGCGCGTATAATCCGACCGATTTTACAGTG
AGCGTCATCGGTCTGATCATCTCACTGGAGATTGCGCGCCGGGTATTGGGCTGGTCGATGACGCTGATCGGCCTCTTTTT
CATTCTCTACCTGCGCTTCGGCTTTGTGCTGTACGACATTCCGATTCTTGACACCTTTGCCCATCGTGGCCAGCCCTGGC
AACGGGTGGCAACGGTGCTCTTCCTCGATCAGGAAGGCGTATTCGGCGTCATGGCCAATGTGCTGGTCAGTTACGTTATT
CTGTTCATCTTTTTCGGCGCATTTCTCAGTAAAGCCGGCGCCAGCCGTTTCTTCATCGATCTGCCGCTGGCCCTGGCCGG
ACGAAGCACCGGCGGTCCGGCAAAAGTGGCAGTCTTGTCGTCGGCACTGTTTGGCTCGATTTCCGGGAGCGCAATTGCCA
ACACCGTCAGTACCGGCACGTTCACCATTCCCTTGATGAAACGGGCCGGTTTTCGACCTCATGTGGCTGGGGCGATTGAG
CCGTCGGCGTCGATTGGCGGTGCATTTATGCCGCCGGTGATGGGGGCGGGCGCGTTCTTGATGTCAGAGCTGACGAACAC
GCCCTACTCGGTGATTGTGGCGATCTCAATTGTGCCGGCCATTCTCTACTTTCTGTCGGTATTGACGATGGTACATTTTG
AGGCCAAGAAGTTCGGGTTAAGTGGGATCAAAACCGAACAGACGGCCTGGCAGATCATTCGGAACGAATGGTACCTCTCG
CTGCCGCTGCTGGTCGTCATCTTTATGCTTGCACAAGGGTTTTCGCCCGGCTACGCCGCGTTCTGGTCGATTCTCTCGTG
TATCCCCCTGATGTACCTGTTGCCGGAAAACCTGGCCGATTTCAAAAATCCGGCGGCACAGGGTGGGACGGTGGTGAACG
CCTTTCTGCGCAGTACGGTTCGCGTGATCAAGACGATAAACGAGGCGATCCAGAAGGGTGTACGTGATACGCTGGTGATC
GGCGCCACCGTTGGCGTGATCGGGATGATCGTCGGTACCATTTACGCGACCGGAGTAGGGCAACGGTTTGCCAACATCAT
TGTCAGCCTGAGCGGTGGTAATCTGCTGATTGCGGTGCTGCTGATCGGCATCGCGTCACTCATTCTGGGCATGGGGGTAC
CGGTAACCGCAGCTTACCTGATCACCGCTGTGATTGCCGTCCCAGCGTTGAATGATTTGGGGGTTGCGATCCTGGCGGCG
CACATGATCGTCTACTGGTTTAGCCAGGATAGCAATATCACGCCGCCGGTCTGTGTGGCTGCTTATGCGGGTGCCGCGAT
TGCCGGGGCCGATCCCTGGAAGACGGGGTGGACATCATTTAAATTTGCGAAATTGCTATACGTGATGCCGCTCCTCTTCG
CCTTTACGCCAGAGATTCTGATGATTGGCGAAAGCGGTCAGCCGCTGGTCGATGTAGAATGGAGTAAGGTCGCGATGTCG
TGGTTCTCGGCGACCCTCGGCACGATTGCCTTCTCGGCGGTTTCGATGTTCTATCTGGTGCGCAAGACGACGTGGTGGGA
GTGGGTGATCGCCGCGTTTGGCACGTTCCTCTGTTTCTGGCCCAGCCTGCTGACGGATGCGATAGGCGTGCTGATCGTTG
GCGGTGTCTGGTTCTGGCAGTGGTACGATGTGCGCCGACAGCGCCAGGCAGAGGTGCGGTCGAGTATGGCCGATTAG

Upstream 100 bases:

>100_bases
AATTGAAGTAGGCTCTTTCATTGAACAGCAACGGGGCGGCTGAGCTGGAACCGGAGGGAGCAGTTTGCTCCCTCTGGTAC
TACCACGTAAAGAGGCGCTT

Downstream 100 bases:

>100_bases
AAGATCGGCTCACGGTTGCCACGATGATACAGGCAGGCTTGTGGGGCGGGTGAGACCTCTCTACACCTGATCATTGTGGT
AACTGTACGAGGGTCTCCAC

Product: TRAP transporter, 4TM/12TM fusion protein

Products: NA

Alternate protein names: Trap Transporter 4tm/12tm Fusion Protein; TRAP Transporter; TRAP-Type Transport System Fused Permease Component; TRAP-Type Transport System Permease Component; TRAP-Type Transporter 4TM/12TM Fusion Protein; Trap Family Transporter; TRAP-Type Transporter Permease Component; C4-Dicarboxylate Anaerobic Carrier; Permease; TRAP-Type Transport System Permease; TRAP-Type Transport System Permease Protein; TRAP-T Family Transporter With Fused DctQ/DctM Subunits; TRAP Transporter Large Permease; TRAP Transport System Permease Component; TRAP-Type Transporter Fused Permeases; Trap Transporter; C4-Dicarboxylate Transporter; TRAP Type Transporter Protein; Inner Membrane Protein; TRAP-T Family Transporter Fused Inner Membrane Subunits; TRAP Transporter Transmembrane Protein; TRAP Transporter Permease; Integral Membrane Protein; Transcriptional Regulator DeoR Family; N-Carbamoyl-L-Amino Acid Hydrolase; TRAP-Type Transport System Fused Permease Components; 4TM/12TM TRAP Transporter; TRAP Transporter Membrane-Spanning Component; TRAP-Type Transport System

Number of amino acids: Translated: 718; Mature: 717

Protein sequence:

>718_residues
MSDLKQPDSVGATPTSDEIDQEKVREYLEQEEKPTRSLGRFWGIVVTLIAVGMAGFYIYTAGTLPAPVQWQRGIYVMLTY
ILVLLLYPAVGKKSPLQPWLSGLAERLPGPLRAVIVPRGGPTILDLALIVITVIVVGYFIINYPALQRRAGAYNPTDFTV
SVIGLIISLEIARRVLGWSMTLIGLFFILYLRFGFVLYDIPILDTFAHRGQPWQRVATVLFLDQEGVFGVMANVLVSYVI
LFIFFGAFLSKAGASRFFIDLPLALAGRSTGGPAKVAVLSSALFGSISGSAIANTVSTGTFTIPLMKRAGFRPHVAGAIE
PSASIGGAFMPPVMGAGAFLMSELTNTPYSVIVAISIVPAILYFLSVLTMVHFEAKKFGLSGIKTEQTAWQIIRNEWYLS
LPLLVVIFMLAQGFSPGYAAFWSILSCIPLMYLLPENLADFKNPAAQGGTVVNAFLRSTVRVIKTINEAIQKGVRDTLVI
GATVGVIGMIVGTIYATGVGQRFANIIVSLSGGNLLIAVLLIGIASLILGMGVPVTAAYLITAVIAVPALNDLGVAILAA
HMIVYWFSQDSNITPPVCVAAYAGAAIAGADPWKTGWTSFKFAKLLYVMPLLFAFTPEILMIGESGQPLVDVEWSKVAMS
WFSATLGTIAFSAVSMFYLVRKTTWWEWVIAAFGTFLCFWPSLLTDAIGVLIVGGVWFWQWYDVRRQRQAEVRSSMAD

Sequences:

>Translated_718_residues
MSDLKQPDSVGATPTSDEIDQEKVREYLEQEEKPTRSLGRFWGIVVTLIAVGMAGFYIYTAGTLPAPVQWQRGIYVMLTY
ILVLLLYPAVGKKSPLQPWLSGLAERLPGPLRAVIVPRGGPTILDLALIVITVIVVGYFIINYPALQRRAGAYNPTDFTV
SVIGLIISLEIARRVLGWSMTLIGLFFILYLRFGFVLYDIPILDTFAHRGQPWQRVATVLFLDQEGVFGVMANVLVSYVI
LFIFFGAFLSKAGASRFFIDLPLALAGRSTGGPAKVAVLSSALFGSISGSAIANTVSTGTFTIPLMKRAGFRPHVAGAIE
PSASIGGAFMPPVMGAGAFLMSELTNTPYSVIVAISIVPAILYFLSVLTMVHFEAKKFGLSGIKTEQTAWQIIRNEWYLS
LPLLVVIFMLAQGFSPGYAAFWSILSCIPLMYLLPENLADFKNPAAQGGTVVNAFLRSTVRVIKTINEAIQKGVRDTLVI
GATVGVIGMIVGTIYATGVGQRFANIIVSLSGGNLLIAVLLIGIASLILGMGVPVTAAYLITAVIAVPALNDLGVAILAA
HMIVYWFSQDSNITPPVCVAAYAGAAIAGADPWKTGWTSFKFAKLLYVMPLLFAFTPEILMIGESGQPLVDVEWSKVAMS
WFSATLGTIAFSAVSMFYLVRKTTWWEWVIAAFGTFLCFWPSLLTDAIGVLIVGGVWFWQWYDVRRQRQAEVRSSMAD
>Mature_717_residues
SDLKQPDSVGATPTSDEIDQEKVREYLEQEEKPTRSLGRFWGIVVTLIAVGMAGFYIYTAGTLPAPVQWQRGIYVMLTYI
LVLLLYPAVGKKSPLQPWLSGLAERLPGPLRAVIVPRGGPTILDLALIVITVIVVGYFIINYPALQRRAGAYNPTDFTVS
VIGLIISLEIARRVLGWSMTLIGLFFILYLRFGFVLYDIPILDTFAHRGQPWQRVATVLFLDQEGVFGVMANVLVSYVIL
FIFFGAFLSKAGASRFFIDLPLALAGRSTGGPAKVAVLSSALFGSISGSAIANTVSTGTFTIPLMKRAGFRPHVAGAIEP
SASIGGAFMPPVMGAGAFLMSELTNTPYSVIVAISIVPAILYFLSVLTMVHFEAKKFGLSGIKTEQTAWQIIRNEWYLSL
PLLVVIFMLAQGFSPGYAAFWSILSCIPLMYLLPENLADFKNPAAQGGTVVNAFLRSTVRVIKTINEAIQKGVRDTLVIG
ATVGVIGMIVGTIYATGVGQRFANIIVSLSGGNLLIAVLLIGIASLILGMGVPVTAAYLITAVIAVPALNDLGVAILAAH
MIVYWFSQDSNITPPVCVAAYAGAAIAGADPWKTGWTSFKFAKLLYVMPLLFAFTPEILMIGESGQPLVDVEWSKVAMSW
FSATLGTIAFSAVSMFYLVRKTTWWEWVIAAFGTFLCFWPSLLTDAIGVLIVGGVWFWQWYDVRRQRQAEVRSSMAD

Specific function: Unknown

COG id: COG4666

COG function: function code R; TRAP-type uncharacterized transport system, fused permease components

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 77893; Mature: 77762

Theoretical pI: Translated: 9.27; Mature: 9.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDLKQPDSVGATPTSDEIDQEKVREYLEQEEKPTRSLGRFWGIVVTLIAVGMAGFYIYT
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHEEE
AGTLPAPVQWQRGIYVMLTYILVLLLYPAVGKKSPLQPWLSGLAERLPGPLRAVIVPRGG
CCCCCCCCCHHCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCC
PTILDLALIVITVIVVGYFIINYPALQRRAGAYNPTDFTVSVIGLIISLEIARRVLGWSM
CHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
TLIGLFFILYLRFGFVLYDIPILDTFAHRGQPWQRVATVLFLDQEGVFGVMANVLVSYVI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHEECCCCHHHHHHHHHHHHHH
LFIFFGAFLSKAGASRFFIDLPLALAGRSTGGPAKVAVLSSALFGSISGSAIANTVSTGT
HHHHHHHHHHHCCCCEEEEECCHHHCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCE
FTIPLMKRAGFRPHVAGAIEPSASIGGAFMPPVMGAGAFLMSELTNTPYSVIVAISIVPA
EEEEHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
ILYFLSVLTMVHFEAKKFGLSGIKTEQTAWQIIRNEWYLSLPLLVVIFMLAQGFSPGYAA
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCHHHH
FWSILSCIPLMYLLPENLADFKNPAAQGGTVVNAFLRSTVRVIKTINEAIQKGVRDTLVI
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
GATVGVIGMIVGTIYATGVGQRFANIIVSLSGGNLLIAVLLIGIASLILGMGVPVTAAYL
HHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHCCCHHHHHHH
ITAVIAVPALNDLGVAILAAHMIVYWFSQDSNITPPVCVAAYAGAAIAGADPWKTGWTSF
HHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCHH
KFAKLLYVMPLLFAFTPEILMIGESGQPLVDVEWSKVAMSWFSATLGTIAFSAVSMFYLV
HHHHHHHHHHHHHHCCCCEEEECCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RKTTWWEWVIAAFGTFLCFWPSLLTDAIGVLIVGGVWFWQWYDVRRQRQAEVRSSMAD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SDLKQPDSVGATPTSDEIDQEKVREYLEQEEKPTRSLGRFWGIVVTLIAVGMAGFYIYT
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHEEE
AGTLPAPVQWQRGIYVMLTYILVLLLYPAVGKKSPLQPWLSGLAERLPGPLRAVIVPRGG
CCCCCCCCCHHCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCC
PTILDLALIVITVIVVGYFIINYPALQRRAGAYNPTDFTVSVIGLIISLEIARRVLGWSM
CHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
TLIGLFFILYLRFGFVLYDIPILDTFAHRGQPWQRVATVLFLDQEGVFGVMANVLVSYVI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHEECCCCHHHHHHHHHHHHHH
LFIFFGAFLSKAGASRFFIDLPLALAGRSTGGPAKVAVLSSALFGSISGSAIANTVSTGT
HHHHHHHHHHHCCCCEEEEECCHHHCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCE
FTIPLMKRAGFRPHVAGAIEPSASIGGAFMPPVMGAGAFLMSELTNTPYSVIVAISIVPA
EEEEHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
ILYFLSVLTMVHFEAKKFGLSGIKTEQTAWQIIRNEWYLSLPLLVVIFMLAQGFSPGYAA
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCHHHH
FWSILSCIPLMYLLPENLADFKNPAAQGGTVVNAFLRSTVRVIKTINEAIQKGVRDTLVI
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
GATVGVIGMIVGTIYATGVGQRFANIIVSLSGGNLLIAVLLIGIASLILGMGVPVTAAYL
HHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHCCCHHHHHHH
ITAVIAVPALNDLGVAILAAHMIVYWFSQDSNITPPVCVAAYAGAAIAGADPWKTGWTSF
HHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCHH
KFAKLLYVMPLLFAFTPEILMIGESGQPLVDVEWSKVAMSWFSATLGTIAFSAVSMFYLV
HHHHHHHHHHHHHHCCCCEEEECCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RKTTWWEWVIAAFGTFLCFWPSLLTDAIGVLIVGGVWFWQWYDVRRQRQAEVRSSMAD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA