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The map label for this gene is yfbS [C]

Identifier: 222523940

GI number: 222523940

Start: 804641

End: 806443

Strand: Reverse

Name: yfbS [C]

Synonym: Chy400_0655

Alternate gene names: 222523940

Gene position: 806443-804641 (Counterclockwise)

Preceding gene: 222523941

Following gene: 222523937

Centisome position: 15.31

GC content: 60.9

Gene sequence:

>1803_bases
ATGTCTGTGCCACTCTTAAGTACTCCAGAGTTGGTGCTCTTTATAATCACGCTTATCGGACTTGGATTGATCGTTAGCAA
TCGGCTCCGCGCCGACCTTGCCGCACTTCTGGTGTTAATCGCTCTCGGAGTCACCCGCGTGCTTACTCCGCAGGAAGCCC
TGAGTGGCTTCAGCAATAGCGCCGTCGTCACCATCGTCGGGCTCTTCGTCATTACGGCGGCACTAGAGCAGACCGGCGTG
GTTGCGTGGCTCGCCTCCCGCCTGGCTGCGCTCAGCGGCCAGGACGAGGGTCGCATGGTTGCTGTGTTCATGGCTGCGGG
GGTCATCCTTTCACTGGTGGTAAACAACATCGCAGCCGGAGCCGTGCTGCTCCCTGCTGCGGTACGTATCGCACACCAGA
ATCGGGTGCCGCCATCGAAACTGCTGATCCCGCTCTCGTTCGGCACCTTGCTCGGCGGTATGGCCACTCTCTTCACGACC
GCAAACATCATTCTCAGCGGCAATCTGGTGGCCCAGGGCCAGCGTGGGCTGACCATGGGCGACTTCCTTCGCTCTGGCGG
GCCGCTGGTCGTCACCGGTATGATCTATATGCTGCTCGTCGGGCGCCGGCTCTTGCCAGCTCGCGAGAGTGTTGGGAGCA
CCGCTGTCTCCACAGTAGATCTTCGCAGCATCTACCGCCTCGACGAACGCCTATGGGAAGTGTGGGTTCCAGAGGGTGCC
GATGTGGTTGGTAAAACCCTGGCTGAGAGTGCAATCGGCACACACACGGGAACCACTGTGCTGGCGATCTGGCGCAGCCA
CGAAGCGAGGCTCAACCCCGCACCAGATGATCGGTTGCTTGCAGGTGACATCCTGCTTCTGTTAGGGCAAGAAGCCAACG
TTCGCCAGCTCGCGTCCATCGGCCTGCAGATTGGCCGCAACGGTGTGTCCGATCTGAACCGGAACGTACCAATCGAGCTT
GCCGAGGTGGTGATCGGGCCACGGGCGCCTGTTATCGGCCAGACGCTCAGGCAACTCCAGTTCCGCACCAGGTTCGGGCT
GACTGCCGTGGCTCTCTGGCGCGATGGACGAAGCTATCGCACCAATGTGGGCGACTTCCCGCTTGAGACTGGCGACGCGC
TGCTGATGACCGGCTCGGCGACGCGGGTACGTCAGCTCGCTGCTGAGCCCGGCTTCATTGTGCTGGATACACCCCATGTT
GCCCCGTCTCCCGGACGGAAGGCCTTCTGGGCGGCACTAATCACTGCTGTGGTGCTGCTCATTGCTGCGGTGGGCTGGGT
TGCGACGTCCGAGGCGATGCTGGCCGGAGCTGCGGCGCTGGTACTGGCCGGCTGCATCAGTATGGACGATGCCTACCGTG
CAATAGAGTGGCGGGTTGTGGTACTGATTGCAGGGTTATTGCCAATTGGCACAGCGCTTGTCTCGACCGGCTTGGGTGCA
CGCTTGGGTTCTATCCTCACTGAAAGTCTGGCAGCATACGGTCCACTTGCGCTGATTGCGGGGTTATTCCTCGCCACCGT
GCTGGTAACGCAACTGGTTGGGGGGCAGGTCGCTGCGTTGATCATTGGCCCTATAGCAGTCAGTGCCGCGATGAGCGCAG
GCACCAACCCACAGGCGGTGGCAGTGGCGGTAGCCATGGGCTGCTCCGTCGCCTTCCTCACTCCGATTGCCCACCCGGTC
AACGTGCTAATGATGGGCCCAGGTAATTACCGCTTCGGCGACTTCTTCCGTGTCGGTTTCGGGCAAACTGTGGTTTGTTT
CATAACTCTGCTGTTGACCATGCCTCTCGTGTGGCAACTCTGA

Upstream 100 bases:

>100_bases
TTTCTGTCAGAGCGATCCTCGTCGCCGAATGGCTGGATATCAATGGTGCAGGTGGGCGTTGTAGTCCTGGTCTTGCAAGC
CTAGCGGTGAGGTATTGATA

Downstream 100 bases:

>100_bases
GCCGCCCTCTCCGATATCCACCACACCTGTATACGGACTGGACTGGTTGCGCTGGCCCAACAGTATGCCCGGCCAGTCGA
ATAGCGCTCGCTACGACTGA

Product: TrkA-C domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 600; Mature: 599

Protein sequence:

>600_residues
MSVPLLSTPELVLFIITLIGLGLIVSNRLRADLAALLVLIALGVTRVLTPQEALSGFSNSAVVTIVGLFVITAALEQTGV
VAWLASRLAALSGQDEGRMVAVFMAAGVILSLVVNNIAAGAVLLPAAVRIAHQNRVPPSKLLIPLSFGTLLGGMATLFTT
ANIILSGNLVAQGQRGLTMGDFLRSGGPLVVTGMIYMLLVGRRLLPARESVGSTAVSTVDLRSIYRLDERLWEVWVPEGA
DVVGKTLAESAIGTHTGTTVLAIWRSHEARLNPAPDDRLLAGDILLLLGQEANVRQLASIGLQIGRNGVSDLNRNVPIEL
AEVVIGPRAPVIGQTLRQLQFRTRFGLTAVALWRDGRSYRTNVGDFPLETGDALLMTGSATRVRQLAAEPGFIVLDTPHV
APSPGRKAFWAALITAVVLLIAAVGWVATSEAMLAGAAALVLAGCISMDDAYRAIEWRVVVLIAGLLPIGTALVSTGLGA
RLGSILTESLAAYGPLALIAGLFLATVLVTQLVGGQVAALIIGPIAVSAAMSAGTNPQAVAVAVAMGCSVAFLTPIAHPV
NVLMMGPGNYRFGDFFRVGFGQTVVCFITLLLTMPLVWQL

Sequences:

>Translated_600_residues
MSVPLLSTPELVLFIITLIGLGLIVSNRLRADLAALLVLIALGVTRVLTPQEALSGFSNSAVVTIVGLFVITAALEQTGV
VAWLASRLAALSGQDEGRMVAVFMAAGVILSLVVNNIAAGAVLLPAAVRIAHQNRVPPSKLLIPLSFGTLLGGMATLFTT
ANIILSGNLVAQGQRGLTMGDFLRSGGPLVVTGMIYMLLVGRRLLPARESVGSTAVSTVDLRSIYRLDERLWEVWVPEGA
DVVGKTLAESAIGTHTGTTVLAIWRSHEARLNPAPDDRLLAGDILLLLGQEANVRQLASIGLQIGRNGVSDLNRNVPIEL
AEVVIGPRAPVIGQTLRQLQFRTRFGLTAVALWRDGRSYRTNVGDFPLETGDALLMTGSATRVRQLAAEPGFIVLDTPHV
APSPGRKAFWAALITAVVLLIAAVGWVATSEAMLAGAAALVLAGCISMDDAYRAIEWRVVVLIAGLLPIGTALVSTGLGA
RLGSILTESLAAYGPLALIAGLFLATVLVTQLVGGQVAALIIGPIAVSAAMSAGTNPQAVAVAVAMGCSVAFLTPIAHPV
NVLMMGPGNYRFGDFFRVGFGQTVVCFITLLLTMPLVWQL
>Mature_599_residues
SVPLLSTPELVLFIITLIGLGLIVSNRLRADLAALLVLIALGVTRVLTPQEALSGFSNSAVVTIVGLFVITAALEQTGVV
AWLASRLAALSGQDEGRMVAVFMAAGVILSLVVNNIAAGAVLLPAAVRIAHQNRVPPSKLLIPLSFGTLLGGMATLFTTA
NIILSGNLVAQGQRGLTMGDFLRSGGPLVVTGMIYMLLVGRRLLPARESVGSTAVSTVDLRSIYRLDERLWEVWVPEGAD
VVGKTLAESAIGTHTGTTVLAIWRSHEARLNPAPDDRLLAGDILLLLGQEANVRQLASIGLQIGRNGVSDLNRNVPIELA
EVVIGPRAPVIGQTLRQLQFRTRFGLTAVALWRDGRSYRTNVGDFPLETGDALLMTGSATRVRQLAAEPGFIVLDTPHVA
PSPGRKAFWAALITAVVLLIAAVGWVATSEAMLAGAAALVLAGCISMDDAYRAIEWRVVVLIAGLLPIGTALVSTGLGAR
LGSILTESLAAYGPLALIAGLFLATVLVTQLVGGQVAALIIGPIAVSAAMSAGTNPQAVAVAVAMGCSVAFLTPIAHPVN
VLMMGPGNYRFGDFFRVGFGQTVVCFITLLLTMPLVWQL

Specific function: Unknown

COG id: COG0471

COG function: function code P; Di- and tricarboxylate transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 RCK C-terminal domains [H]

Homologues:

Organism=Escherichia coli, GI1788629, Length=595, Percent_Identity=30.2521008403361, Blast_Score=235, Evalue=7e-63,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001898
- InterPro:   IPR006037 [H]

Pfam domain/function: PF00939 Na_sulph_symp; PF02080 TrkA_C [H]

EC number: NA

Molecular weight: Translated: 62681; Mature: 62550

Theoretical pI: Translated: 9.18; Mature: 9.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVPLLSTPELVLFIITLIGLGLIVSNRLRADLAALLVLIALGVTRVLTPQEALSGFSNS
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCC
AVVTIVGLFVITAALEQTGVVAWLASRLAALSGQDEGRMVAVFMAAGVILSLVVNNIAAG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHH
AVLLPAAVRIAHQNRVPPSKLLIPLSFGTLLGGMATLFTTANIILSGNLVAQGQRGLTMG
HHHHHHHHHHHHCCCCCHHHEEEEEEHHHHHHHHHHHHHHHHHEEECCEEECCCCCCCHH
DFLRSGGPLVVTGMIYMLLVGRRLLPARESVGSTAVSTVDLRSIYRLDERLWEVWVPEGA
HHHHCCCCEEHHHHHHHHHHCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
DVVGKTLAESAIGTHTGTTVLAIWRSHEARLNPAPDDRLLAGDILLLLGQEANVRQLASI
HHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCHHHHEHEEECCCCCHHHHHHH
GLQIGRNGVSDLNRNVPIELAEVVIGPRAPVIGQTLRQLQFRTRFGLTAVALWRDGRSYR
HHHHCCCCHHHHCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCC
TNVGDFPLETGDALLMTGSATRVRQLAAEPGFIVLDTPHVAPSPGRKAFWAALITAVVLL
CCCCCCCCCCCCEEEEECCHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHH
IAAVGWVATSEAMLAGAAALVLAGCISMDDAYRAIEWRVVVLIAGLLPIGTALVSTGLGA
HHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
RLGSILTESLAAYGPLALIAGLFLATVLVTQLVGGQVAALIIGPIAVSAAMSAGTNPQAV
HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHH
AVAVAMGCSVAFLTPIAHPVNVLMMGPGNYRFGDFFRVGFGQTVVCFITLLLTMPLVWQL
HHHHHHCCHHHHHHHCCCCCEEEEECCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SVPLLSTPELVLFIITLIGLGLIVSNRLRADLAALLVLIALGVTRVLTPQEALSGFSNS
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCC
AVVTIVGLFVITAALEQTGVVAWLASRLAALSGQDEGRMVAVFMAAGVILSLVVNNIAAG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHH
AVLLPAAVRIAHQNRVPPSKLLIPLSFGTLLGGMATLFTTANIILSGNLVAQGQRGLTMG
HHHHHHHHHHHHCCCCCHHHEEEEEEHHHHHHHHHHHHHHHHHEEECCEEECCCCCCCHH
DFLRSGGPLVVTGMIYMLLVGRRLLPARESVGSTAVSTVDLRSIYRLDERLWEVWVPEGA
HHHHCCCCEEHHHHHHHHHHCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
DVVGKTLAESAIGTHTGTTVLAIWRSHEARLNPAPDDRLLAGDILLLLGQEANVRQLASI
HHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCHHHHEHEEECCCCCHHHHHHH
GLQIGRNGVSDLNRNVPIELAEVVIGPRAPVIGQTLRQLQFRTRFGLTAVALWRDGRSYR
HHHHCCCCHHHHCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCC
TNVGDFPLETGDALLMTGSATRVRQLAAEPGFIVLDTPHVAPSPGRKAFWAALITAVVLL
CCCCCCCCCCCCEEEEECCHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHH
IAAVGWVATSEAMLAGAAALVLAGCISMDDAYRAIEWRVVVLIAGLLPIGTALVSTGLGA
HHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
RLGSILTESLAAYGPLALIAGLFLATVLVTQLVGGQVAALIIGPIAVSAAMSAGTNPQAV
HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHH
AVAVAMGCSVAFLTPIAHPVNVLMMGPGNYRFGDFFRVGFGQTVVCFITLLLTMPLVWQL
HHHHHHCCHHHHHHHCCCCCEEEEECCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]