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The map label for this gene is csoR [H]

Identifier: 222523917

GI number: 222523917

Start: 765593

End: 765865

Strand: Reverse

Name: csoR [H]

Synonym: Chy400_0627

Alternate gene names: 222523917

Gene position: 765865-765593 (Counterclockwise)

Preceding gene: 222523918

Following gene: 222523916

Centisome position: 14.54

GC content: 51.28

Gene sequence:

>273_bases
ATGGATCAAGACCAAAAACAGCAGATTCTCAATCGTCTGAATATCATTGAGGGTCATATTCGCGGCGTGAAGCGCATGGT
CGAAGAGGACGCCTATTGTATCGATGTCCTGAATCAGACGCGGGCGATTGCGCAGGCGCTGGCAAAGCTGGATGCGCTGA
TTTTGAACCGTCACCTCCATAGTTGTGTGATCACGGCTATTCGGAGCGAGGATGTTGGTGAGCGCGAGCGGGTGATTGCT
GAGTTGATGCAGGTGTTTGAGCGTATTCATTAG

Upstream 100 bases:

>100_bases
GCTTGAGATGGGCGATGGCGGTCAAATCTCTCTAGGACCATGGGGCATGCTGGCGAGTACTACCACCCAAAGGCTGTTTT
CACTCGAAGAAGGGTTGAAT

Downstream 100 bases:

>100_bases
CCAATAAGGAGATGAGCAATGGTAACTGAGCAATTCCGTGTTCCTGGGGTGTCGTGTCAGCACTGTGTGCACGCGGTGCG
CAAGGAAGTCAGTGCTTTGC

Product: hypothetical protein

Products: NA

Alternate protein names: Copper-sensitive operon repressor [H]

Number of amino acids: Translated: 90; Mature: 90

Protein sequence:

>90_residues
MDQDQKQQILNRLNIIEGHIRGVKRMVEEDAYCIDVLNQTRAIAQALAKLDALILNRHLHSCVITAIRSEDVGERERVIA
ELMQVFERIH

Sequences:

>Translated_90_residues
MDQDQKQQILNRLNIIEGHIRGVKRMVEEDAYCIDVLNQTRAIAQALAKLDALILNRHLHSCVITAIRSEDVGERERVIA
ELMQVFERIH
>Mature_90_residues
MDQDQKQQILNRLNIIEGHIRGVKRMVEEDAYCIDVLNQTRAIAQALAKLDALILNRHLHSCVITAIRSEDVGERERVIA
ELMQVFERIH

Specific function: Copper-sensitive repressor that has a key role in copper homeostasis. Negatively regulates expression of the copZA operon and of ycnJ. In the absence of copper ions, binds with high affinity to the copZA promoter and represses the transcription. In the pr

COG id: COG1937

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CsoR family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003735 [H]

Pfam domain/function: PF02583 DUF156 [H]

EC number: NA

Molecular weight: Translated: 10417; Mature: 10417

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDQDQKQQILNRLNIIEGHIRGVKRMVEEDAYCIDVLNQTRAIAQALAKLDALILNRHLH
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SCVITAIRSEDVGERERVIAELMQVFERIH
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MDQDQKQQILNRLNIIEGHIRGVKRMVEEDAYCIDVLNQTRAIAQALAKLDALILNRHLH
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SCVITAIRSEDVGERERVIAELMQVFERIH
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]