Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
---|---|
Accession | NC_012032 |
Length | 5,268,950 |
Click here to switch to the map view.
The map label for this gene is yhhP [C]
Identifier: 222523907
GI number: 222523907
Start: 753459
End: 753704
Strand: Direct
Name: yhhP [C]
Synonym: Chy400_0616
Alternate gene names: 222523907
Gene position: 753459-753704 (Clockwise)
Preceding gene: 222523906
Following gene: 222523908
Centisome position: 14.3
GC content: 54.07
Gene sequence:
>246_bases ATGACAACCCCAAACGTAACTATCGACAAAGAGATCGATGCCCGTGGTAGCCATTGCCCTGGGCCAATGATGGAACTGAT CCGCGGTATCAAGAGTGTTCCCCTCGGTTCAGTGGTCGCCGTCCTATCGAGTGACCCTGGTTCAGCCAAGGATATTCCGA TCTGGGTGCAGAAGGCCGGTCACGAGTTTATTGGTGCCTTCCCCGAACAAGGCTTCACCCGTTTTGTTGTGCGGAAAGTG CGTTGA
Upstream 100 bases:
>100_bases TACAGAATATGTTGTCACTTCTTTCTGTTTAAGCTCCAGGCAAAATGCTATTCTTATCACAAGAAATGCAATCGGTCAGT GTTGACCGCAGGAGGCAACT
Downstream 100 bases:
>100_bases TGCACATTGATCCGGGTTCGATACGAGTACGCGCCCATCAAAATAATGCGGCGCAAGGTGTATATTGGTTTTAATCTGTA CCTGGAGCCTGTCCGCATGC
Product: SirA family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 81; Mature: 80
Protein sequence:
>81_residues MTTPNVTIDKEIDARGSHCPGPMMELIRGIKSVPLGSVVAVLSSDPGSAKDIPIWVQKAGHEFIGAFPEQGFTRFVVRKV R
Sequences:
>Translated_81_residues MTTPNVTIDKEIDARGSHCPGPMMELIRGIKSVPLGSVVAVLSSDPGSAKDIPIWVQKAGHEFIGAFPEQGFTRFVVRKV R >Mature_80_residues TTPNVTIDKEIDARGSHCPGPMMELIRGIKSVPLGSVVAVLSSDPGSAKDIPIWVQKAGHEFIGAFPEQGFTRFVVRKVR
Specific function: Unknown
COG id: COG0425
COG function: function code O; Predicted redox protein, regulator of disulfide bond formation
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0033 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001455 [H]
Pfam domain/function: PF01206 SirA [H]
EC number: NA
Molecular weight: Translated: 8775; Mature: 8644
Theoretical pI: Translated: 9.46; Mature: 9.46
Prosite motif: PS01148 UPF0033
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTPNVTIDKEIDARGSHCPGPMMELIRGIKSVPLGSVVAVLSSDPGSAKDIPIWVQKAG CCCCCCEECCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHEECCCCCCCCCCCHHEECCC HEFIGAFPEQGFTRFVVRKVR CHHHCCCCCCCHHHHHHHHCC >Mature Secondary Structure TTPNVTIDKEIDARGSHCPGPMMELIRGIKSVPLGSVVAVLSSDPGSAKDIPIWVQKAG CCCCCEECCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHEECCCCCCCCCCCHHEECCC HEFIGAFPEQGFTRFVVRKVR CHHHCCCCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11029001 [H]