Definition Chloroflexus sp. Y-400-fl chromosome, complete genome.
Accession NC_012032
Length 5,268,950

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The map label for this gene is 222523886

Identifier: 222523886

GI number: 222523886

Start: 731492

End: 732334

Strand: Reverse

Name: 222523886

Synonym: Chy400_0595

Alternate gene names: NA

Gene position: 732334-731492 (Counterclockwise)

Preceding gene: 222523887

Following gene: 222523883

Centisome position: 13.9

GC content: 67.73

Gene sequence:

>843_bases
ATGGACTTTTCGGTTCTGCGCGTATATCATGACGCTATGACACGAACAGCCTATCCCAGTGATGGTTCTGATGAAGAGTG
GGCATTCGTCGCGCCCTCTGTGACGCTGATGGACGAAGCAGCGCCGCAGCGAAACTACCCCCTGCGCGACGTCGCCAACG
GGCTGCGCTCCATGCTGCGCACGGGTGCACCGTGGCGAATGCTGCCCACCGCCGTGCCGCCGTGGCCCGTGGTGTATCAC
CAGCCCCAGCGCTGGCTGAAAGCGGGCGTGGGTGCGCAGATGGTGCACGACGTGCGGATGCTGCTGCGCGACATCACCGA
CCGTGCGCCCCAGCCCCGTGCCGTCATGGTGGACAGCCGGACGCTTCAGTCGACGCCGGAACGCGGGGGCCGTGCTGGGT
ACGATGGACACAACCGCCGGAACGGCGCGACGGTACATCTGGCCGTGGCTACGCTGGGGCACCTGCCGGCAGTAGTGGTC
ACCCCGGCCACCGACCACGATCGGGCGCAGGTGGCGGCGCTGGCGCAACGCATGCAGGAGATACCTGGTGACACGGTAGC
GGTGGCCGTCGTTGACCAGGGGTACACCGGTGCGCAACCGGCAGCCGAGGCCGCCGCCCACGGCAGTCGCCTGGCGGTGG
TCACGCTGCCGACCGCCACGCGCGGCGTTGGCGTGCTGCCGCGGCGCTGGGTGGTCGAGCGCAGGTTCGCCTGGATGACG
CGCTTCCGTCGCTTGGTGCGTGACGACGACCGTGTGGCGGCGACGCTGGCCGGCTTGCATGTCGTTGCTGTTGCCATCGT
GGTGGCCCATCGGTTTGTCTCGCTCATGGTTCAACGTTCATAA

Upstream 100 bases:

>100_bases
TCTATCGGCTGTGCGCCTCGTGTCGCGAGCAAATCGAAATCATCGGTGACGGCCCACCTCCTGAAACCAGCCAGGACATC
TACATCATCTAGAGCCTGTT

Downstream 100 bases:

>100_bases
CAGGCTCTAAGCGTCGTCCGGGCAAACATCTACCCCTGAATGGCGCGGGATCGGATTGCAATGAGCAAAAACAGTACTCG
TTTCTCTCCAGATGGCGTAA

Product: transposase IS5 family protein-like protein

Products: NA

Alternate protein names: Transposase IS4 Family Protein; IS4 Family Transposase; Transposase IS5 Family Protein; IS5 Family Transposase; IS4 Insertion Sequence Transposase Protein; Transposase And Inactivated Derivatives-Like Protein; Transposase-Like Protein; Transposase Of; Transposase Protein; Transposase And Inactivated Derivatives; Is4 Transposase Protein; Transposase IS5 Family Protein-Like Protein; Family Transposase; Transposon; IS Transposase; ISPsy19 Transposase; Transposase IS5 Family

Number of amino acids: Translated: 280; Mature: 280

Protein sequence:

>280_residues
MDFSVLRVYHDAMTRTAYPSDGSDEEWAFVAPSVTLMDEAAPQRNYPLRDVANGLRSMLRTGAPWRMLPTAVPPWPVVYH
QPQRWLKAGVGAQMVHDVRMLLRDITDRAPQPRAVMVDSRTLQSTPERGGRAGYDGHNRRNGATVHLAVATLGHLPAVVV
TPATDHDRAQVAALAQRMQEIPGDTVAVAVVDQGYTGAQPAAEAAAHGSRLAVVTLPTATRGVGVLPRRWVVERRFAWMT
RFRRLVRDDDRVAATLAGLHVVAVAIVVAHRFVSLMVQRS

Sequences:

>Translated_280_residues
MDFSVLRVYHDAMTRTAYPSDGSDEEWAFVAPSVTLMDEAAPQRNYPLRDVANGLRSMLRTGAPWRMLPTAVPPWPVVYH
QPQRWLKAGVGAQMVHDVRMLLRDITDRAPQPRAVMVDSRTLQSTPERGGRAGYDGHNRRNGATVHLAVATLGHLPAVVV
TPATDHDRAQVAALAQRMQEIPGDTVAVAVVDQGYTGAQPAAEAAAHGSRLAVVTLPTATRGVGVLPRRWVVERRFAWMT
RFRRLVRDDDRVAATLAGLHVVAVAIVVAHRFVSLMVQRS
>Mature_280_residues
MDFSVLRVYHDAMTRTAYPSDGSDEEWAFVAPSVTLMDEAAPQRNYPLRDVANGLRSMLRTGAPWRMLPTAVPPWPVVYH
QPQRWLKAGVGAQMVHDVRMLLRDITDRAPQPRAVMVDSRTLQSTPERGGRAGYDGHNRRNGATVHLAVATLGHLPAVVV
TPATDHDRAQVAALAQRMQEIPGDTVAVAVVDQGYTGAQPAAEAAAHGSRLAVVTLPTATRGVGVLPRRWVVERRFAWMT
RFRRLVRDDDRVAATLAGLHVVAVAIVVAHRFVSLMVQRS

Specific function: Unknown

COG id: COG3293

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30751; Mature: 30751

Theoretical pI: Translated: 11.02; Mature: 11.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFSVLRVYHDAMTRTAYPSDGSDEEWAFVAPSVTLMDEAAPQRNYPLRDVANGLRSMLR
CCHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCHHHHHCCCCCCCCCHHHHHHHHHHHHH
TGAPWRMLPTAVPPWPVVYHQPQRWLKAGVGAQMVHDVRMLLRDITDRAPQPRAVMVDSR
CCCCCEECCCCCCCCCCEEECHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECH
TLQSTPERGGRAGYDGHNRRNGATVHLAVATLGHLPAVVVTPATDHDRAQVAALAQRMQE
HHHCCCCCCCCCCCCCCCCCCCCEEEEHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHH
IPGDTVAVAVVDQGYTGAQPAAEAAAHGSRLAVVTLPTATRGVGVLPRRWVVERRFAWMT
CCCCEEEEEEEECCCCCCCHHHHHHHCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHH
RFRRLVRDDDRVAATLAGLHVVAVAIVVAHRFVSLMVQRS
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDFSVLRVYHDAMTRTAYPSDGSDEEWAFVAPSVTLMDEAAPQRNYPLRDVANGLRSMLR
CCHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCHHHHHCCCCCCCCCHHHHHHHHHHHHH
TGAPWRMLPTAVPPWPVVYHQPQRWLKAGVGAQMVHDVRMLLRDITDRAPQPRAVMVDSR
CCCCCEECCCCCCCCCCEEECHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECH
TLQSTPERGGRAGYDGHNRRNGATVHLAVATLGHLPAVVVTPATDHDRAQVAALAQRMQE
HHHCCCCCCCCCCCCCCCCCCCCEEEEHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHH
IPGDTVAVAVVDQGYTGAQPAAEAAAHGSRLAVVTLPTATRGVGVLPRRWVVERRFAWMT
CCCCEEEEEEEECCCCCCCHHHHHHHCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHH
RFRRLVRDDDRVAATLAGLHVVAVAIVVAHRFVSLMVQRS
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA