Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
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Accession | NC_012032 |
Length | 5,268,950 |
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The map label for this gene is 222523886
Identifier: 222523886
GI number: 222523886
Start: 731492
End: 732334
Strand: Reverse
Name: 222523886
Synonym: Chy400_0595
Alternate gene names: NA
Gene position: 732334-731492 (Counterclockwise)
Preceding gene: 222523887
Following gene: 222523883
Centisome position: 13.9
GC content: 67.73
Gene sequence:
>843_bases ATGGACTTTTCGGTTCTGCGCGTATATCATGACGCTATGACACGAACAGCCTATCCCAGTGATGGTTCTGATGAAGAGTG GGCATTCGTCGCGCCCTCTGTGACGCTGATGGACGAAGCAGCGCCGCAGCGAAACTACCCCCTGCGCGACGTCGCCAACG GGCTGCGCTCCATGCTGCGCACGGGTGCACCGTGGCGAATGCTGCCCACCGCCGTGCCGCCGTGGCCCGTGGTGTATCAC CAGCCCCAGCGCTGGCTGAAAGCGGGCGTGGGTGCGCAGATGGTGCACGACGTGCGGATGCTGCTGCGCGACATCACCGA CCGTGCGCCCCAGCCCCGTGCCGTCATGGTGGACAGCCGGACGCTTCAGTCGACGCCGGAACGCGGGGGCCGTGCTGGGT ACGATGGACACAACCGCCGGAACGGCGCGACGGTACATCTGGCCGTGGCTACGCTGGGGCACCTGCCGGCAGTAGTGGTC ACCCCGGCCACCGACCACGATCGGGCGCAGGTGGCGGCGCTGGCGCAACGCATGCAGGAGATACCTGGTGACACGGTAGC GGTGGCCGTCGTTGACCAGGGGTACACCGGTGCGCAACCGGCAGCCGAGGCCGCCGCCCACGGCAGTCGCCTGGCGGTGG TCACGCTGCCGACCGCCACGCGCGGCGTTGGCGTGCTGCCGCGGCGCTGGGTGGTCGAGCGCAGGTTCGCCTGGATGACG CGCTTCCGTCGCTTGGTGCGTGACGACGACCGTGTGGCGGCGACGCTGGCCGGCTTGCATGTCGTTGCTGTTGCCATCGT GGTGGCCCATCGGTTTGTCTCGCTCATGGTTCAACGTTCATAA
Upstream 100 bases:
>100_bases TCTATCGGCTGTGCGCCTCGTGTCGCGAGCAAATCGAAATCATCGGTGACGGCCCACCTCCTGAAACCAGCCAGGACATC TACATCATCTAGAGCCTGTT
Downstream 100 bases:
>100_bases CAGGCTCTAAGCGTCGTCCGGGCAAACATCTACCCCTGAATGGCGCGGGATCGGATTGCAATGAGCAAAAACAGTACTCG TTTCTCTCCAGATGGCGTAA
Product: transposase IS5 family protein-like protein
Products: NA
Alternate protein names: Transposase IS4 Family Protein; IS4 Family Transposase; Transposase IS5 Family Protein; IS5 Family Transposase; IS4 Insertion Sequence Transposase Protein; Transposase And Inactivated Derivatives-Like Protein; Transposase-Like Protein; Transposase Of; Transposase Protein; Transposase And Inactivated Derivatives; Is4 Transposase Protein; Transposase IS5 Family Protein-Like Protein; Family Transposase; Transposon; IS Transposase; ISPsy19 Transposase; Transposase IS5 Family
Number of amino acids: Translated: 280; Mature: 280
Protein sequence:
>280_residues MDFSVLRVYHDAMTRTAYPSDGSDEEWAFVAPSVTLMDEAAPQRNYPLRDVANGLRSMLRTGAPWRMLPTAVPPWPVVYH QPQRWLKAGVGAQMVHDVRMLLRDITDRAPQPRAVMVDSRTLQSTPERGGRAGYDGHNRRNGATVHLAVATLGHLPAVVV TPATDHDRAQVAALAQRMQEIPGDTVAVAVVDQGYTGAQPAAEAAAHGSRLAVVTLPTATRGVGVLPRRWVVERRFAWMT RFRRLVRDDDRVAATLAGLHVVAVAIVVAHRFVSLMVQRS
Sequences:
>Translated_280_residues MDFSVLRVYHDAMTRTAYPSDGSDEEWAFVAPSVTLMDEAAPQRNYPLRDVANGLRSMLRTGAPWRMLPTAVPPWPVVYH QPQRWLKAGVGAQMVHDVRMLLRDITDRAPQPRAVMVDSRTLQSTPERGGRAGYDGHNRRNGATVHLAVATLGHLPAVVV TPATDHDRAQVAALAQRMQEIPGDTVAVAVVDQGYTGAQPAAEAAAHGSRLAVVTLPTATRGVGVLPRRWVVERRFAWMT RFRRLVRDDDRVAATLAGLHVVAVAIVVAHRFVSLMVQRS >Mature_280_residues MDFSVLRVYHDAMTRTAYPSDGSDEEWAFVAPSVTLMDEAAPQRNYPLRDVANGLRSMLRTGAPWRMLPTAVPPWPVVYH QPQRWLKAGVGAQMVHDVRMLLRDITDRAPQPRAVMVDSRTLQSTPERGGRAGYDGHNRRNGATVHLAVATLGHLPAVVV TPATDHDRAQVAALAQRMQEIPGDTVAVAVVDQGYTGAQPAAEAAAHGSRLAVVTLPTATRGVGVLPRRWVVERRFAWMT RFRRLVRDDDRVAATLAGLHVVAVAIVVAHRFVSLMVQRS
Specific function: Unknown
COG id: COG3293
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30751; Mature: 30751
Theoretical pI: Translated: 11.02; Mature: 11.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDFSVLRVYHDAMTRTAYPSDGSDEEWAFVAPSVTLMDEAAPQRNYPLRDVANGLRSMLR CCHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCHHHHHCCCCCCCCCHHHHHHHHHHHHH TGAPWRMLPTAVPPWPVVYHQPQRWLKAGVGAQMVHDVRMLLRDITDRAPQPRAVMVDSR CCCCCEECCCCCCCCCCEEECHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECH TLQSTPERGGRAGYDGHNRRNGATVHLAVATLGHLPAVVVTPATDHDRAQVAALAQRMQE HHHCCCCCCCCCCCCCCCCCCCCEEEEHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHH IPGDTVAVAVVDQGYTGAQPAAEAAAHGSRLAVVTLPTATRGVGVLPRRWVVERRFAWMT CCCCEEEEEEEECCCCCCCHHHHHHHCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHH RFRRLVRDDDRVAATLAGLHVVAVAIVVAHRFVSLMVQRS HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MDFSVLRVYHDAMTRTAYPSDGSDEEWAFVAPSVTLMDEAAPQRNYPLRDVANGLRSMLR CCHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCHHHHHCCCCCCCCCHHHHHHHHHHHHH TGAPWRMLPTAVPPWPVVYHQPQRWLKAGVGAQMVHDVRMLLRDITDRAPQPRAVMVDSR CCCCCEECCCCCCCCCCEEECHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECH TLQSTPERGGRAGYDGHNRRNGATVHLAVATLGHLPAVVVTPATDHDRAQVAALAQRMQE HHHCCCCCCCCCCCCCCCCCCCCEEEEHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHH IPGDTVAVAVVDQGYTGAQPAAEAAAHGSRLAVVTLPTATRGVGVLPRRWVVERRFAWMT CCCCEEEEEEEECCCCCCCHHHHHHHCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHH RFRRLVRDDDRVAATLAGLHVVAVAIVVAHRFVSLMVQRS HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA