Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
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Accession | NC_012032 |
Length | 5,268,950 |
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The map label for this gene is 222523881
Identifier: 222523881
GI number: 222523881
Start: 704511
End: 705680
Strand: Reverse
Name: 222523881
Synonym: Chy400_0590
Alternate gene names: NA
Gene position: 705680-704511 (Counterclockwise)
Preceding gene: 222523883
Following gene: 222523879
Centisome position: 13.39
GC content: 55.81
Gene sequence:
>1170_bases ATGAAGCGACCGCTTCTTCTCACCACATTCCTGACTCTCGTACTGGTAGCTTGCAGCACGAGTTCTGTTCAGGTGACATC CACGTCAACACCCGCCAATCCAACTGCATTGGCGTCATTGTTGGCAGACTTGCCAGATGGGGCTGGTCAGTTTCGCACCG ACTTTAGCCGTCATTCCGTGCCGTTTGCCGAAATTCGCTCTGGTGGCCCGCCAAAAGATGGCATCCCTGCGATAGACAAT CCACGCTTCGTCTCGGTAACAGCAGCGAACGAGTGGCTTCGGCCACGCGAGCCGGTAATCGCGTTGGTAATTGGGCAGGA AGCTCGTGCCTACCCGATCCAGATTCTAATGTGGCACGAAATTGTTAACGATACGGTCAATGATATACCGGTAACAGTCA CCTTCTGCCCACTCTGTAACACCGCCATCGTCTTCGAGCGACGCCTCAGTTCGCAGATACTTGATTTCGGCACTACCGGT CTGCTGCGTTACAGCAACCTCGTGATGTACGACCGTCAGACCGAGAGCTGGTGGCAGCAGGCAACTGGTGAGGCGATTGT TGGTGAATTGACCGGTCATCGGCTCGCTTTCATTCCCGCCGCTATAGTGGCCTGGGAGACCTTCGCCGCCGGCTACCCTG ATGGGAGAGTGCTCTCCCGTGAAACGGGTTATGTTCGCGACTATGGTCGTAACCCCTATCTCGGCTACGATGATATTGAG CGCTCGCCCTTTCTGTACGACGGCCCGCCTACTCCGGATGCCTTACCGGCTATGGCTCGTGTTCTAACCGTCGATCACAA TGGTGAGGCGGTTGCGTACCCCTTCGATACGCTCGCTGCGATGCAGGTCATCCACGATGAAGTAGGTGGATTGCCAATTG TAGTCGTGTGGCGCGCCGGTGCTGCTTCGGCGCTCGACAGTGCGCAAATCGCTGATGGCCGTGATGTGGGGATGGCGATA GCCTATCAACGGATCGTCAATGGTCAAACTGTACAATTCACTATTGCCGACGATCATCTGATAGACAGTGAAACTGGCAC CAGGTGGGATCTCTTCGGGCGAGCAATAGATGGCCCCCTGGCAGGAGTGACACTGACCCCCGTACCGGCGATTGATCATT TCTGGTTCTCCTGGGCTGCATTTCGCCCCGATACACGCATCTATCGCTAA
Upstream 100 bases:
>100_bases AAGACAAGAAAAGAGGCTTGCTCAACGCACCAGACCTCTATCCCCTACCCCATGCTCCTGCTTCCTGCGTTCTACTTTCT CCTGAAAAAAGGACACTGCC
Downstream 100 bases:
>100_bases CCAGGGCAGAGTCTGTTTGACCCAGCTCAACTCGCGACAGCGGCAACCATCCGGAATCGGCAGTTCCCGCCCCCAGCGGA GGCGGGCAAGGGTGGGGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 389; Mature: 389
Protein sequence:
>389_residues MKRPLLLTTFLTLVLVACSTSSVQVTSTSTPANPTALASLLADLPDGAGQFRTDFSRHSVPFAEIRSGGPPKDGIPAIDN PRFVSVTAANEWLRPREPVIALVIGQEARAYPIQILMWHEIVNDTVNDIPVTVTFCPLCNTAIVFERRLSSQILDFGTTG LLRYSNLVMYDRQTESWWQQATGEAIVGELTGHRLAFIPAAIVAWETFAAGYPDGRVLSRETGYVRDYGRNPYLGYDDIE RSPFLYDGPPTPDALPAMARVLTVDHNGEAVAYPFDTLAAMQVIHDEVGGLPIVVVWRAGAASALDSAQIADGRDVGMAI AYQRIVNGQTVQFTIADDHLIDSETGTRWDLFGRAIDGPLAGVTLTPVPAIDHFWFSWAAFRPDTRIYR
Sequences:
>Translated_389_residues MKRPLLLTTFLTLVLVACSTSSVQVTSTSTPANPTALASLLADLPDGAGQFRTDFSRHSVPFAEIRSGGPPKDGIPAIDN PRFVSVTAANEWLRPREPVIALVIGQEARAYPIQILMWHEIVNDTVNDIPVTVTFCPLCNTAIVFERRLSSQILDFGTTG LLRYSNLVMYDRQTESWWQQATGEAIVGELTGHRLAFIPAAIVAWETFAAGYPDGRVLSRETGYVRDYGRNPYLGYDDIE RSPFLYDGPPTPDALPAMARVLTVDHNGEAVAYPFDTLAAMQVIHDEVGGLPIVVVWRAGAASALDSAQIADGRDVGMAI AYQRIVNGQTVQFTIADDHLIDSETGTRWDLFGRAIDGPLAGVTLTPVPAIDHFWFSWAAFRPDTRIYR >Mature_389_residues MKRPLLLTTFLTLVLVACSTSSVQVTSTSTPANPTALASLLADLPDGAGQFRTDFSRHSVPFAEIRSGGPPKDGIPAIDN PRFVSVTAANEWLRPREPVIALVIGQEARAYPIQILMWHEIVNDTVNDIPVTVTFCPLCNTAIVFERRLSSQILDFGTTG LLRYSNLVMYDRQTESWWQQATGEAIVGELTGHRLAFIPAAIVAWETFAAGYPDGRVLSRETGYVRDYGRNPYLGYDDIE RSPFLYDGPPTPDALPAMARVLTVDHNGEAVAYPFDTLAAMQVIHDEVGGLPIVVVWRAGAASALDSAQIADGRDVGMAI AYQRIVNGQTVQFTIADDHLIDSETGTRWDLFGRAIDGPLAGVTLTPVPAIDHFWFSWAAFRPDTRIYR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42635; Mature: 42635
Theoretical pI: Translated: 4.69; Mature: 4.69
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRPLLLTTFLTLVLVACSTSSVQVTSTSTPANPTALASLLADLPDGAGQFRTDFSRHSV CCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCHHHCCHHHCCC PFAEIRSGGPPKDGIPAIDNPRFVSVTAANEWLRPREPVIALVIGQEARAYPIQILMWHE CHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCEEEEEECCCCCCCCEEEEEEHH IVNDTVNDIPVTVTFCPLCNTAIVFERRLSSQILDFGTTGLLRYSNLVMYDRQTESWWQQ HHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHEECCEEEECCCHHHHHHH ATGEAIVGELTGHRLAFIPAAIVAWETFAAGYPDGRVLSRETGYVRDYGRNPYLGYDDIE CCCCEEEECCCCCEEEHHHHHHHHHHHHHCCCCCCCEEECCCCCHHHCCCCCCCCCCCCC RSPFLYDGPPTPDALPAMARVLTVDHNGEAVAYPFDTLAAMQVIHDEVGGLPIVVVWRAG CCCEEECCCCCCHHHHHHEEEEEECCCCCEEEECHHHHHHHHHHHHHHCCCEEEEEECCC AASALDSAQIADGRDVGMAIAYQRIVNGQTVQFTIADDHLIDSETGTRWDLFGRAIDGPL CCHHCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCEEECCCCCCCHHHHHHHCCCCC AGVTLTPVPAIDHFWFSWAAFRPDTRIYR CCEEECCCCCHHHHHHHHEEECCCCCCCC >Mature Secondary Structure MKRPLLLTTFLTLVLVACSTSSVQVTSTSTPANPTALASLLADLPDGAGQFRTDFSRHSV CCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCHHHCCHHHCCC PFAEIRSGGPPKDGIPAIDNPRFVSVTAANEWLRPREPVIALVIGQEARAYPIQILMWHE CHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCEEEEEECCCCCCCCEEEEEEHH IVNDTVNDIPVTVTFCPLCNTAIVFERRLSSQILDFGTTGLLRYSNLVMYDRQTESWWQQ HHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHEECCEEEECCCHHHHHHH ATGEAIVGELTGHRLAFIPAAIVAWETFAAGYPDGRVLSRETGYVRDYGRNPYLGYDDIE CCCCEEEECCCCCEEEHHHHHHHHHHHHHCCCCCCCEEECCCCCHHHCCCCCCCCCCCCC RSPFLYDGPPTPDALPAMARVLTVDHNGEAVAYPFDTLAAMQVIHDEVGGLPIVVVWRAG CCCEEECCCCCCHHHHHHEEEEEECCCCCEEEECHHHHHHHHHHHHHHCCCEEEEEECCC AASALDSAQIADGRDVGMAIAYQRIVNGQTVQFTIADDHLIDSETGTRWDLFGRAIDGPL CCHHCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCEEECCCCCCCHHHHHHHCCCCC AGVTLTPVPAIDHFWFSWAAFRPDTRIYR CCEEECCCCCHHHHHHHHEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA