Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
---|---|
Accession | NC_012032 |
Length | 5,268,950 |
Click here to switch to the map view.
The map label for this gene is 222523874
Identifier: 222523874
GI number: 222523874
Start: 696711
End: 698399
Strand: Direct
Name: 222523874
Synonym: Chy400_0583
Alternate gene names: NA
Gene position: 696711-698399 (Clockwise)
Preceding gene: 222523867
Following gene: 222523875
Centisome position: 13.22
GC content: 57.31
Gene sequence:
>1689_bases ATGAGCCAAACACTTTCCTTCACATTAACTATTCTTCTCATCCTCACTGCGTGCGCTACACCTACTTCTGCGCTCACGCC CACTCCGCAGCCTTCGCCACAGCCAACCGCCCTTACTGAAACGCCTGACTCTAAGCTCACCCCTATCCCCGACCCCACTC TTTCTACCTTACCCACTGAGCCAGCCCAACCATTGCCTGCCGGTGCCTACGACCCTGGCGCGTATGTCGTCAGCGACATC TGGGTTGACCCAATCAACGGCGACGACACCCGCGCGGGCTTCCCGCAAGATCAAGCTGTGCGCACCCTCGCCGAAGCGTG GAATCGCATCCCGCGAGATACACCACTCAACGAAACTGGCTACCGCATCAACCTTTTCCCCGGCACCTACACCCCTGAAT ACACGCCCAACTATTGGGAGTCGCGCTACGGTAGTGCGCAGTTCCCCATCATCATCCAACCTGCGGGCGGCAACGGCACT GTCACCCTGCCTTCGGTCAACATCTATGATGTCCGCTACCTGTACATCTTCGGCATTAACTTCCAATCTGAAAACGATGT CTTTCACTGCGAGAAGTGCGATCACATCTTGCTCCGTGGTGTGACCATCACCGGCACGCCGCCCGAAACTGGCTCAACCC AAGAAGCCGTCAAATTCAACCAATCGCAAAACATCTTCATCGAGAACAGCGCTATCTCTGGCGGCTGGGACAACGCTGTT GACTTTGTCGCCGTGCAATACGGGCATGTGCTCGACAGCGAAATTTTCGGCTCAGGCGATTGGTGTATGTACGCCAAAGG CGGCTCTGCTTACCTTCGTGTGGAGGGGAATGAGTTCCACAGTTGCGGCACGGGCGGCTTCACTGCCGGACAAGGCACAG GCTTTCAGTTCATGGTCGCGCCGTGGTTGCAATACGAAGCCTACGATGTGAAAGTGGTCAACAACATCTTCCACGATCTG GAAGGCGCGGCGTTCGGCGTTAATGGCGGCTACAACATCCTGATTGCCTACAACACCGCCTACCGCGTCGGGGCGCGCAG TCACGTTATCGAAGTCGCCTTCGGCGGGCGTTCCTGCGATGGGCAACCCGGTGATGAAGGACGGGAGCGTTGCGATGAGT ACGCCGCCCAAGGCGGTTGGGGCAACAACCTGGTCCCCGACGGCAACAACTATGTGCGCATCCCCAACCGCAACGTGTTC ATCTACAACAACCTTATCTTCAACCCGGATGGCTACCAGTCGCAATGGCAACACTTCTTCATACCAGGTCCAGCACCGGC CAGCGGCGGCGTGCCTGCCCCCGTCACCGCTGATAATAACCTGGTAATCAAAGGCAACGTAATCTGGAACGGCCCCGCCA CGCATCCGCTAGGCGTGGATGATACAACAGGTTGTGCGGCTGAAAACCCCACCTGCAATCCAACACAGATATTGAGCGAT AATGCCATCAACACCGTCAAGCCCGAACTGAGGGCGCCCGATAGCGGCGACTATCACCTCTTCAATCGGCTTAATGTCAC ACCCGCCGTCATCCCGCCGTTTGTATGGGAGATCGGCACAGTGCCCCAGGGCAATCTGGATAACTCCGTGCCAACCGACC GTGATGGGTACCCGCGCACCAATAGCGACAATGCTCCGGGTGCGTATCTGGAACGATGGTTGGTCTGGCTGAGTTTGCTC TTCGGATGA
Upstream 100 bases:
>100_bases TCGGTATTCACTACGGTGCAAGAGCTGCGGATGAGTGTACCCTATTGCACTGAGTTTAAACATGAGCCAACGAGTAATAC GTCTTGCACTGAGTTTGAGC
Downstream 100 bases:
>100_bases CTCCTGGGCTGAAATGCGGCAAGCCTGGCCGCTTCGAGTGAATAGCTGCCTGAATGGGGTCGCCGGGCAAAGCCGGGAGC TACCAATGGATAAATCATTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 562; Mature: 561
Protein sequence:
>562_residues MSQTLSFTLTILLILTACATPTSALTPTPQPSPQPTALTETPDSKLTPIPDPTLSTLPTEPAQPLPAGAYDPGAYVVSDI WVDPINGDDTRAGFPQDQAVRTLAEAWNRIPRDTPLNETGYRINLFPGTYTPEYTPNYWESRYGSAQFPIIIQPAGGNGT VTLPSVNIYDVRYLYIFGINFQSENDVFHCEKCDHILLRGVTITGTPPETGSTQEAVKFNQSQNIFIENSAISGGWDNAV DFVAVQYGHVLDSEIFGSGDWCMYAKGGSAYLRVEGNEFHSCGTGGFTAGQGTGFQFMVAPWLQYEAYDVKVVNNIFHDL EGAAFGVNGGYNILIAYNTAYRVGARSHVIEVAFGGRSCDGQPGDEGRERCDEYAAQGGWGNNLVPDGNNYVRIPNRNVF IYNNLIFNPDGYQSQWQHFFIPGPAPASGGVPAPVTADNNLVIKGNVIWNGPATHPLGVDDTTGCAAENPTCNPTQILSD NAINTVKPELRAPDSGDYHLFNRLNVTPAVIPPFVWEIGTVPQGNLDNSVPTDRDGYPRTNSDNAPGAYLERWLVWLSLL FG
Sequences:
>Translated_562_residues MSQTLSFTLTILLILTACATPTSALTPTPQPSPQPTALTETPDSKLTPIPDPTLSTLPTEPAQPLPAGAYDPGAYVVSDI WVDPINGDDTRAGFPQDQAVRTLAEAWNRIPRDTPLNETGYRINLFPGTYTPEYTPNYWESRYGSAQFPIIIQPAGGNGT VTLPSVNIYDVRYLYIFGINFQSENDVFHCEKCDHILLRGVTITGTPPETGSTQEAVKFNQSQNIFIENSAISGGWDNAV DFVAVQYGHVLDSEIFGSGDWCMYAKGGSAYLRVEGNEFHSCGTGGFTAGQGTGFQFMVAPWLQYEAYDVKVVNNIFHDL EGAAFGVNGGYNILIAYNTAYRVGARSHVIEVAFGGRSCDGQPGDEGRERCDEYAAQGGWGNNLVPDGNNYVRIPNRNVF IYNNLIFNPDGYQSQWQHFFIPGPAPASGGVPAPVTADNNLVIKGNVIWNGPATHPLGVDDTTGCAAENPTCNPTQILSD NAINTVKPELRAPDSGDYHLFNRLNVTPAVIPPFVWEIGTVPQGNLDNSVPTDRDGYPRTNSDNAPGAYLERWLVWLSLL FG >Mature_561_residues SQTLSFTLTILLILTACATPTSALTPTPQPSPQPTALTETPDSKLTPIPDPTLSTLPTEPAQPLPAGAYDPGAYVVSDIW VDPINGDDTRAGFPQDQAVRTLAEAWNRIPRDTPLNETGYRINLFPGTYTPEYTPNYWESRYGSAQFPIIIQPAGGNGTV TLPSVNIYDVRYLYIFGINFQSENDVFHCEKCDHILLRGVTITGTPPETGSTQEAVKFNQSQNIFIENSAISGGWDNAVD FVAVQYGHVLDSEIFGSGDWCMYAKGGSAYLRVEGNEFHSCGTGGFTAGQGTGFQFMVAPWLQYEAYDVKVVNNIFHDLE GAAFGVNGGYNILIAYNTAYRVGARSHVIEVAFGGRSCDGQPGDEGRERCDEYAAQGGWGNNLVPDGNNYVRIPNRNVFI YNNLIFNPDGYQSQWQHFFIPGPAPASGGVPAPVTADNNLVIKGNVIWNGPATHPLGVDDTTGCAAENPTCNPTQILSDN AINTVKPELRAPDSGDYHLFNRLNVTPAVIPPFVWEIGTVPQGNLDNSVPTDRDGYPRTNSDNAPGAYLERWLVWLSLLF G
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 61063; Mature: 60932
Theoretical pI: Translated: 4.26; Mature: 4.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQTLSFTLTILLILTACATPTSALTPTPQPSPQPTALTETPDSKLTPIPDPTLSTLPTE CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCHHCCCCC PAQPLPAGAYDPGAYVVSDIWVDPINGDDTRAGFPQDQAVRTLAEAWNRIPRDTPLNETG CCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCC YRINLFPGTYTPEYTPNYWESRYGSAQFPIIIQPAGGNGTVTLPSVNIYDVRYLYIFGIN CEEEECCCCCCCCCCCCHHHHCCCCCCCCEEEEECCCCCEEEECCCEEEEEEEEEEEEEE FQSENDVFHCEKCDHILLRGVTITGTPPETGSTQEAVKFNQSQNIFIENSAISGGWDNAV ECCCCCEEECCCCCEEEEEEEEEECCCCCCCCCHHHHEECCCCCEEEECCCCCCCCCCCE DFVAVQYGHVLDSEIFGSGDWCMYAKGGSAYLRVEGNEFHSCGTGGFTAGQGTGFQFMVA EEEEEECCCHHHHHHCCCCCEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCEEEEEE PWLQYEAYDVKVVNNIFHDLEGAAFGVNGGYNILIAYNTAYRVGARSHVIEVAFGGRSCD CCEEEEEEEEHHHHHHHHHCCCCEEECCCCEEEEEEECCEEEECCCCEEEEEEECCCCCC GQPGDEGRERCDEYAAQGGWGNNLVPDGNNYVRIPNRNVFIYNNLIFNPDGYQSQWQHFF CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCEEEEEEEEECCCCCCCCCCEEE IPGPAPASGGVPAPVTADNNLVIKGNVIWNGPATHPLGVDDTTGCAAENPTCNPTQILSD ECCCCCCCCCCCCCEECCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHEEECC NAINTVKPELRAPDSGDYHLFNRLNVTPAVIPPFVWEIGTVPQGNLDNSVPTDRDGYPRT CCCCCCCCCCCCCCCCCEEEEEECCCCHHHCCCHHHHCCCCCCCCCCCCCCCCCCCCCCC NSDNAPGAYLERWLVWLSLLFG CCCCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure SQTLSFTLTILLILTACATPTSALTPTPQPSPQPTALTETPDSKLTPIPDPTLSTLPTE CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCHHCCCCC PAQPLPAGAYDPGAYVVSDIWVDPINGDDTRAGFPQDQAVRTLAEAWNRIPRDTPLNETG CCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCC YRINLFPGTYTPEYTPNYWESRYGSAQFPIIIQPAGGNGTVTLPSVNIYDVRYLYIFGIN CEEEECCCCCCCCCCCCHHHHCCCCCCCCEEEEECCCCCEEEECCCEEEEEEEEEEEEEE FQSENDVFHCEKCDHILLRGVTITGTPPETGSTQEAVKFNQSQNIFIENSAISGGWDNAV ECCCCCEEECCCCCEEEEEEEEEECCCCCCCCCHHHHEECCCCCEEEECCCCCCCCCCCE DFVAVQYGHVLDSEIFGSGDWCMYAKGGSAYLRVEGNEFHSCGTGGFTAGQGTGFQFMVA EEEEEECCCHHHHHHCCCCCEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCEEEEEE PWLQYEAYDVKVVNNIFHDLEGAAFGVNGGYNILIAYNTAYRVGARSHVIEVAFGGRSCD CCEEEEEEEEHHHHHHHHHCCCCEEECCCCEEEEEEECCEEEECCCCEEEEEEECCCCCC GQPGDEGRERCDEYAAQGGWGNNLVPDGNNYVRIPNRNVFIYNNLIFNPDGYQSQWQHFF CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCEEEEEEEEECCCCCCCCCCEEE IPGPAPASGGVPAPVTADNNLVIKGNVIWNGPATHPLGVDDTTGCAAENPTCNPTQILSD ECCCCCCCCCCCCCEECCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHEEECC NAINTVKPELRAPDSGDYHLFNRLNVTPAVIPPFVWEIGTVPQGNLDNSVPTDRDGYPRT CCCCCCCCCCCCCCCCCEEEEEECCCCHHHCCCHHHHCCCCCCCCCCCCCCCCCCCCCCC NSDNAPGAYLERWLVWLSLLFG CCCCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA