| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is yjcG [C]
Identifier: 222523872
GI number: 222523872
Start: 692441
End: 694594
Strand: Reverse
Name: yjcG [C]
Synonym: Chy400_0580
Alternate gene names: 222523872
Gene position: 694594-692441 (Counterclockwise)
Preceding gene: 222523873
Following gene: 222523871
Centisome position: 13.18
GC content: 55.9
Gene sequence:
>2154_bases ATGTCCACTTCAGCTCAGAGCGTCTTCCGCAATCGGATGGCGCGCTACTACGGCTACTTTACGATTGGCTTCATCGCTGT CAGCCTCCTGATGCTGTTGCTTGAAGTCTTTGCCGGTCTACCTACGCAACTTATCGGTTGGGCTTTCCTTCTGCTTACCT TCGCTTTGTATGCAACGATTGGTGTTCTCTCGCGCACGAAAGTGCTTGATGAGTATTACGTTGCAGGACGCAATGTTCCG GCAGTGTTCAACGGTATGGCAACCGGTGCAGACTGGATGAGTGCGGCGTCATTCATCTCAATGGCCGGTACGCTCTGGTT GATTGGCTACGATGGTCTGGCCTACATTATGGGTTGGACTGGTGGCTATGTGCTGCTGGCACTGCTCTTTGCTCCGTACC TGCGCAAGTTCGGTCAGTACACCATTCCCGACTTTGTCGGTGCCCGTTTCGGTGGTAACACCGCACGTGTGGTGGCTGCA ATCTGCGCCATCATCGTCTCGCTGACCTACGTGACCGCTCAGGTCGTGGGTGTCGGTATCATCATGCAGCGCTTCGTTGG CGTTGATTACATGATCGGTGTTATCCTCGGCCTCTCAGGTGTGCTGGTCTGTTCGTTCCTGGGTGGTATGAAGGCGGTGA CCTGGACGCAAGTGGCCCAGTACATTATTCTGATTACCGCCTATCTGATCCCGGTGACTGCGTTGTCAATCCAGCTTACC GGCTTCCCGCTTCCTCAGTTGAGTTATGGTCAGGCGCTTCAGCGCATTCAAGTGCTGGAACAGGAACAGGGCCTGTCGAA GGCATCTGAGTCGCCGGTCGTACCAGGTAAGTTTGTTACCAGTGGATATATTCCACCGTTCAATGAAGGTCTGAGCAACG TTGCTGCAATTGATGCGGTTCGGCAGCTCAATACGCAGTTTGGTCTGAATGTTACCCCACCCGCTGCGCAGGCAATTCCT GATGCTAATAAGCCAGAGCTGGGCGACTGGCGTGGAACGCCGTGGAACTTCCTGGCTCTGATGGCGTGTCTGATGCTGGG TACTGCCGGTCTGCCCCACATTCTGATCCGCTTCTACACGGTGCCTAGCGTGCGTGAGAGCCGCTTGAGTGTGGGTTGGT CGCTCTTCTTCATATTCCTGCTCTACTTCACCGCCCCGGCTTATGCCGCGTTCTCGCGCTGGCAGATTCTTGAGAATGTG GTGGGCAAGGAGATCAGCCAGTTGCCGGAGTGGACATCCACCTGGGCGCGGAACGGCTTGATCGTGATCCGCGACCTGAA GGTGCTGGATGGGGTGGAGGTTGGTAAGGAACCAACCTGGGTGAAGAACCTGATCAACGCCGGTTCGGTTGTGGTCGAAG ATGCTAATGGAAATGGCAGAATCGATCTTGCCGCCTGGGAAGATGCCGGTGATGGCAAAGGCCGCGCTGGTGAGATCTCC GGTTCGGCAGTAACCAAGGCGCGTGTTGATGGTATCTTGCAGCTCAATGAGTTAGGGCGCACGGCTGGTGATGGTATCGA TGGCGACCTTGTCGTGCTCTCGACACCTGACATCGCCGGTCTGCCCTTCACTATCGGCGCCCTCATCGCCGCCGGTGGTC TGGCTGCCGCTCTGAGCACCGCTGACGGTCTGCTGGTCGTGATCGCATCGGCTGTTGCTCACGATATCTATTTCCGCACG ATCAATCCGAAAGCCAGCCTCAATACTCGTATCGTGCTGGGCAAGACAATGATTGTTGTCGCCGCAGTGATCGCTGCACT GCTCGCTATTCCACGCCTCGCCCTGATCGCGCAGATGGTGGCCTGGGCCTTCTCAATGGCTGCGTCCACCTTCTTCCCGG TCGTCTTGCTGGGCATCTTCTGGAAGCGAGCAAATGGGGCTGGTGCGATTGCCGGTATGATCGGCGGTTTGGCTGTGACC ATCTTCTACATGGCGAACAACTATCTCAATCCGGCCTTTAATGTGCTCGGTATCTCGCACCTCGGTTCCGGTATCTTCGG TCTGCCGGTGGCGATTATTTTGATCGTGGTCGTGAGCCTGCTCACGAAAGAACCCTCGAAGGAGATTCAGGATCTGGTTG AGAACTTGCGCAACCCGATTACTGACGACGAGGGTATGACCAAGATGATCGATAAGATGGCACCGGCGAAGTAA
Upstream 100 bases:
>100_bases CTACGCTTATGCGATGAACAAGCTCGATGCAAAGTACGGACTGAGTGATCGCGACCGCTAAGCTGTTACCGGTGTCTTCA GTTGTAGAGGAGAAGAGCGC
Downstream 100 bases:
>100_bases TCACTCATTCTCGTCTGGGAAGGCGCGGAGTCTATGCTCCGCGCCTTTTTTATTGGTTGCCGTGGAAGGTCGATAGGGGT TCGAGGGCGGACAGAAAGTA
Product: Na+/solute symporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 717; Mature: 716
Protein sequence:
>717_residues MSTSAQSVFRNRMARYYGYFTIGFIAVSLLMLLLEVFAGLPTQLIGWAFLLLTFALYATIGVLSRTKVLDEYYVAGRNVP AVFNGMATGADWMSAASFISMAGTLWLIGYDGLAYIMGWTGGYVLLALLFAPYLRKFGQYTIPDFVGARFGGNTARVVAA ICAIIVSLTYVTAQVVGVGIIMQRFVGVDYMIGVILGLSGVLVCSFLGGMKAVTWTQVAQYIILITAYLIPVTALSIQLT GFPLPQLSYGQALQRIQVLEQEQGLSKASESPVVPGKFVTSGYIPPFNEGLSNVAAIDAVRQLNTQFGLNVTPPAAQAIP DANKPELGDWRGTPWNFLALMACLMLGTAGLPHILIRFYTVPSVRESRLSVGWSLFFIFLLYFTAPAYAAFSRWQILENV VGKEISQLPEWTSTWARNGLIVIRDLKVLDGVEVGKEPTWVKNLINAGSVVVEDANGNGRIDLAAWEDAGDGKGRAGEIS GSAVTKARVDGILQLNELGRTAGDGIDGDLVVLSTPDIAGLPFTIGALIAAGGLAAALSTADGLLVVIASAVAHDIYFRT INPKASLNTRIVLGKTMIVVAAVIAALLAIPRLALIAQMVAWAFSMAASTFFPVVLLGIFWKRANGAGAIAGMIGGLAVT IFYMANNYLNPAFNVLGISHLGSGIFGLPVAIILIVVVSLLTKEPSKEIQDLVENLRNPITDDEGMTKMIDKMAPAK
Sequences:
>Translated_717_residues MSTSAQSVFRNRMARYYGYFTIGFIAVSLLMLLLEVFAGLPTQLIGWAFLLLTFALYATIGVLSRTKVLDEYYVAGRNVP AVFNGMATGADWMSAASFISMAGTLWLIGYDGLAYIMGWTGGYVLLALLFAPYLRKFGQYTIPDFVGARFGGNTARVVAA ICAIIVSLTYVTAQVVGVGIIMQRFVGVDYMIGVILGLSGVLVCSFLGGMKAVTWTQVAQYIILITAYLIPVTALSIQLT GFPLPQLSYGQALQRIQVLEQEQGLSKASESPVVPGKFVTSGYIPPFNEGLSNVAAIDAVRQLNTQFGLNVTPPAAQAIP DANKPELGDWRGTPWNFLALMACLMLGTAGLPHILIRFYTVPSVRESRLSVGWSLFFIFLLYFTAPAYAAFSRWQILENV VGKEISQLPEWTSTWARNGLIVIRDLKVLDGVEVGKEPTWVKNLINAGSVVVEDANGNGRIDLAAWEDAGDGKGRAGEIS GSAVTKARVDGILQLNELGRTAGDGIDGDLVVLSTPDIAGLPFTIGALIAAGGLAAALSTADGLLVVIASAVAHDIYFRT INPKASLNTRIVLGKTMIVVAAVIAALLAIPRLALIAQMVAWAFSMAASTFFPVVLLGIFWKRANGAGAIAGMIGGLAVT IFYMANNYLNPAFNVLGISHLGSGIFGLPVAIILIVVVSLLTKEPSKEIQDLVENLRNPITDDEGMTKMIDKMAPAK >Mature_716_residues STSAQSVFRNRMARYYGYFTIGFIAVSLLMLLLEVFAGLPTQLIGWAFLLLTFALYATIGVLSRTKVLDEYYVAGRNVPA VFNGMATGADWMSAASFISMAGTLWLIGYDGLAYIMGWTGGYVLLALLFAPYLRKFGQYTIPDFVGARFGGNTARVVAAI CAIIVSLTYVTAQVVGVGIIMQRFVGVDYMIGVILGLSGVLVCSFLGGMKAVTWTQVAQYIILITAYLIPVTALSIQLTG FPLPQLSYGQALQRIQVLEQEQGLSKASESPVVPGKFVTSGYIPPFNEGLSNVAAIDAVRQLNTQFGLNVTPPAAQAIPD ANKPELGDWRGTPWNFLALMACLMLGTAGLPHILIRFYTVPSVRESRLSVGWSLFFIFLLYFTAPAYAAFSRWQILENVV GKEISQLPEWTSTWARNGLIVIRDLKVLDGVEVGKEPTWVKNLINAGSVVVEDANGNGRIDLAAWEDAGDGKGRAGEISG SAVTKARVDGILQLNELGRTAGDGIDGDLVVLSTPDIAGLPFTIGALIAAGGLAAALSTADGLLVVIASAVAHDIYFRTI NPKASLNTRIVLGKTMIVVAAVIAALLAIPRLALIAQMVAWAFSMAASTFFPVVLLGIFWKRANGAGAIAGMIGGLAVTI FYMANNYLNPAFNVLGISHLGSGIFGLPVAIILIVVVSLLTKEPSKEIQDLVENLRNPITDDEGMTKMIDKMAPAK
Specific function: Unknown
COG id: COG4147
COG function: function code R; Predicted symporter
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family [H]
Homologues:
Organism=Homo sapiens, GI4507035, Length=194, Percent_Identity=25.7731958762887, Blast_Score=70, Evalue=6e-12, Organism=Escherichia coli, GI1790503, Length=335, Percent_Identity=28.955223880597, Blast_Score=124, Evalue=2e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001734 - InterPro: IPR019899 [H]
Pfam domain/function: PF00474 SSF [H]
EC number: NA
Molecular weight: Translated: 76592; Mature: 76461
Theoretical pI: Translated: 7.98; Mature: 7.98
Prosite motif: PS00457 NA_SOLUT_SYMP_2 ; PS50283 NA_SOLUT_SYMP_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTSAQSVFRNRMARYYGYFTIGFIAVSLLMLLLEVFAGLPTQLIGWAFLLLTFALYATI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH GVLSRTKVLDEYYVAGRNVPAVFNGMATGADWMSAASFISMAGTLWLIGYDGLAYIMGWT HHHHHHHHHHHHHHCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHEEEEECCCHHHHHHCH GGYVLLALLFAPYLRKFGQYTIPDFVGARFGGNTARVVAAICAIIVSLTYVTAQVVGVGI HHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH IMQRFVGVDYMIGVILGLSGVLVCSFLGGMKAVTWTQVAQYIILITAYLIPVTALSIQLT HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEE GFPLPQLSYGQALQRIQVLEQEQGLSKASESPVVPGKFVTSGYIPPFNEGLSNVAAIDAV CCCCCCCHHHHHHHHHHHHHHHHCHHHCCCCCCCCCCHHCCCCCCCHHHHHHHHHHHHHH RQLNTQFGLNVTPPAAQAIPDANKPELGDWRGTPWNFLALMACLMLGTAGLPHILIRFYT HHHHHHCCCCCCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHC VPSVRESRLSVGWSLFFIFLLYFTAPAYAAFSRWQILENVVGKEISQLPEWTSTWARNGL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCE IVIRDLKVLDGVEVGKEPTWVKNLINAGSVVVEDANGNGRIDLAAWEDAGDGKGRAGEIS EEEECCHHHCCCCCCCCCHHHHHHHCCCCEEEEECCCCCEEEEEEECCCCCCCCCCCCCC GSAVTKARVDGILQLNELGRTAGDGIDGDLVVLSTPDIAGLPFTIGALIAAGGLAAALST CCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHH ADGLLVVIASAVAHDIYFRTINPKASLNTRIVLGKTMIVVAAVIAALLAIPRLALIAQMV CCHHHHHHHHHHHHHHHEEECCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHH AWAFSMAASTFFPVVLLGIFWKRANGAGAIAGMIGGLAVTIFYMANNYLNPAFNVLGISH HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH LGSGIFGLPVAIILIVVVSLLTKEPSKEIQDLVENLRNPITDDEGMTKMIDKMAPAK HCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCC >Mature Secondary Structure STSAQSVFRNRMARYYGYFTIGFIAVSLLMLLLEVFAGLPTQLIGWAFLLLTFALYATI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH GVLSRTKVLDEYYVAGRNVPAVFNGMATGADWMSAASFISMAGTLWLIGYDGLAYIMGWT HHHHHHHHHHHHHHCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHEEEEECCCHHHHHHCH GGYVLLALLFAPYLRKFGQYTIPDFVGARFGGNTARVVAAICAIIVSLTYVTAQVVGVGI HHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH IMQRFVGVDYMIGVILGLSGVLVCSFLGGMKAVTWTQVAQYIILITAYLIPVTALSIQLT HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEE GFPLPQLSYGQALQRIQVLEQEQGLSKASESPVVPGKFVTSGYIPPFNEGLSNVAAIDAV CCCCCCCHHHHHHHHHHHHHHHHCHHHCCCCCCCCCCHHCCCCCCCHHHHHHHHHHHHHH RQLNTQFGLNVTPPAAQAIPDANKPELGDWRGTPWNFLALMACLMLGTAGLPHILIRFYT HHHHHHCCCCCCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHC VPSVRESRLSVGWSLFFIFLLYFTAPAYAAFSRWQILENVVGKEISQLPEWTSTWARNGL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCE IVIRDLKVLDGVEVGKEPTWVKNLINAGSVVVEDANGNGRIDLAAWEDAGDGKGRAGEIS EEEECCHHHCCCCCCCCCHHHHHHHCCCCEEEEECCCCCEEEEEEECCCCCCCCCCCCCC GSAVTKARVDGILQLNELGRTAGDGIDGDLVVLSTPDIAGLPFTIGALIAAGGLAAALST CCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHH ADGLLVVIASAVAHDIYFRTINPKASLNTRIVLGKTMIVVAAVIAALLAIPRLALIAQMV CCHHHHHHHHHHHHHHHEEECCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHH AWAFSMAASTFFPVVLLGIFWKRANGAGAIAGMIGGLAVTIFYMANNYLNPAFNVLGISH HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH LGSGIFGLPVAIILIVVVSLLTKEPSKEIQDLVENLRNPITDDEGMTKMIDKMAPAK HCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1356967 [H]