| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222523858
Identifier: 222523858
GI number: 222523858
Start: 677171
End: 677746
Strand: Reverse
Name: 222523858
Synonym: Chy400_0566
Alternate gene names: NA
Gene position: 677746-677171 (Counterclockwise)
Preceding gene: 222523866
Following gene: 222523854
Centisome position: 12.86
GC content: 66.49
Gene sequence:
>576_bases GTGCCTCCAGCTCCGCCAGGTGCGGCTGGGAGCACGTACCTCCGGCACGCCCTTCCGCCAGGCGCGGCAGGAAGTGAGTG CCTCCAGCTCCGCCAGGTGCGGCTGGGAGCACGTACCTCCGGCGCGCCCCTCCACCAGGCGCGGTTGGGAGCGTGTGCCT CCGGTGCGGCTGGGAGCGCGTACCTCCGGTGCGCCCTTCACCTGGAACTGTCCGCCACCCTGATCCTGCTACACCGTTCC CTTCCGTTCCCGACAGGGTCGCACACGCCTGCGCCACTCACAGCAGTGGACAAACCCGGTACTGGCGACTCCCGCCCCCA GCGGGGGCGGGTTGGGGTGGGGGCGTGTCGCAGAATTAGCACTGGGAGCAGCGCACGCGCAACTCGCTCACAAACCCGCT CCCCGGCATTGCACCTGAGCGTGAATGTACGGAACTGGTCAGTCTGCCTGCAACAACCCACCAGCGAGCCGCGGGTGGCA CATCTGGCAGCGCTCCAGCACGGGTCTGACAACCTGAATGAGGCACAGCGTCAGGCAAGATTTGACATACATCAATGCAG CAAGTACACGCTTTGA
Upstream 100 bases:
>100_bases GCTTCCGGTGCGGCTGGGAGCGCGTACCTCCAGCTCCGTTATGCGCGGCTGGGAGTGCGTACCTCCGGCACGCCCTTCCG CCAGGCGCGGCAGGAAGTGA
Downstream 100 bases:
>100_bases ATCGGTACCCTTCCACGCTCTGTGATGGGTGTGGTGTAGCGGGTGGTGGTGGGGAAGGTGAGGTGTGCCATCAACGGGCG CGCAGCCGTGCGTCCCCAGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 191; Mature: 190
Protein sequence:
>191_residues MPPAPPGAAGSTYLRHALPPGAAGSECLQLRQVRLGARTSGAPLHQARLGACASGAAGSAYLRCALHLELSATLILLHRS LPFPTGSHTPAPLTAVDKPGTGDSRPQRGRVGVGACRRISTGSSARATRSQTRSPALHLSVNVRNWSVCLQQPTSEPRVA HLAALQHGSDNLNEAQRQARFDIHQCSKYTL
Sequences:
>Translated_191_residues MPPAPPGAAGSTYLRHALPPGAAGSECLQLRQVRLGARTSGAPLHQARLGACASGAAGSAYLRCALHLELSATLILLHRS LPFPTGSHTPAPLTAVDKPGTGDSRPQRGRVGVGACRRISTGSSARATRSQTRSPALHLSVNVRNWSVCLQQPTSEPRVA HLAALQHGSDNLNEAQRQARFDIHQCSKYTL >Mature_190_residues PPAPPGAAGSTYLRHALPPGAAGSECLQLRQVRLGARTSGAPLHQARLGACASGAAGSAYLRCALHLELSATLILLHRSL PFPTGSHTPAPLTAVDKPGTGDSRPQRGRVGVGACRRISTGSSARATRSQTRSPALHLSVNVRNWSVCLQQPTSEPRVAH LAALQHGSDNLNEAQRQARFDIHQCSKYTL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20085; Mature: 19954
Theoretical pI: Translated: 11.44; Mature: 11.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPAPPGAAGSTYLRHALPPGAAGSECLQLRQVRLGARTSGAPLHQARLGACASGAAGSA CCCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCE YLRCALHLELSATLILLHRSLPFPTGSHTPAPLTAVDKPGTGDSRPQRGRVGVGACRRIS EEEEEEEEEHHHEEEEEECCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCHHHHHCCC TGSSARATRSQTRSPALHLSVNVRNWSVCLQQPTSEPRVAHLAALQHGSDNLNEAQRQAR CCCCCHHHHHHCCCCEEEEEEECCCEEEEEECCCCCCHHHHHHHHHCCCCCHHHHHHHHH FDIHQCSKYTL CCHHHHCCCCC >Mature Secondary Structure PPAPPGAAGSTYLRHALPPGAAGSECLQLRQVRLGARTSGAPLHQARLGACASGAAGSA CCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCE YLRCALHLELSATLILLHRSLPFPTGSHTPAPLTAVDKPGTGDSRPQRGRVGVGACRRIS EEEEEEEEEHHHEEEEEECCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCHHHHHCCC TGSSARATRSQTRSPALHLSVNVRNWSVCLQQPTSEPRVAHLAALQHGSDNLNEAQRQAR CCCCCHHHHHHCCCCEEEEEEECCCEEEEEECCCCCCHHHHHHHHHCCCCCHHHHHHHHH FDIHQCSKYTL CCHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA