Click here to switch to the map view.

The map label for this gene is recR [H]

Identifier: 222523849

GI number: 222523849

Start: 664040

End: 664654

Strand: Reverse

Name: recR [H]

Synonym: Chy400_0557

Alternate gene names: 222523849

Gene position: 664654-664040 (Counterclockwise)

Preceding gene: 222523850

Following gene: 222523848

Centisome position: 12.61

GC content: 57.07

Gene sequence:

>615_bases
ATGACCGTTCGCACGGATCAATTGATTGCCGCACCGGTGGCTCGTCTAATCGAGGAATTTGCCAAACTGCCCGGTATCGG
CCCAAAGACGGCGTCACGTCTGACCTTTTATCTCTTACGGGCTGAACCAAAACAGGCGCTGGCGCTGGCGCAAGCTATTC
TCGATGTGAAAGAACAGGTTGGCTACTGCCGACGCTGTTTTAACATCACCGTGGGTGAGCTGTGTGCAATTTGTCTCGAT
CCGTCGCGCGATCAAACCAAAATCTGTGTGGTTGAAGAGCCGCTCGATGTGCTGGCTATCGAGCGCACCGGTGCCTACCG
CGGTCTGTATCATGTCCTCCACGGCCACATTGCTCCGCTCGAAGGTATCTATCGCGAAGATCTCAAGATTGAAGAGCTAC
TCGCGCGGGTTCGCTCCGAACCTGTTCAGGAAGTGATCCTTGCCACAAACCCCAATACCGAGGGTGAGGCCACCGCCTTT
CTGCTGCTTCGCGACCTCGCACCTCTTGGTGTACGGGTGACCCGGCCAGCACGGGGGTTGCCGACCGGTGGCGATCTCGA
ATGGGCCGATCCGGAAACGCTTGGCTCCGCCTTTGAAGGACGACGTGAGTTGTAA

Upstream 100 bases:

>100_bases
GGTCTCAAGGGGTTGTTCTAAACCGGCATTGTCGTCCTGGTGATGAGGGGAATGCGTCGGCATTGCGCATTGTCACCGAC
GAATCTGTGGTGGAGATGAT

Downstream 100 bases:

>100_bases
GCCGGTGCCTGGGTTAGTATTGCCAAATGTCCTTCCTTCCTGTCGAAAGCCAAAAAAGGTACTTCCTCCCCCTCAACGGA
GGGATGTCAGGGGGGGCGTC

Product: recombination protein RecR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 204; Mature: 203

Protein sequence:

>204_residues
MTVRTDQLIAAPVARLIEEFAKLPGIGPKTASRLTFYLLRAEPKQALALAQAILDVKEQVGYCRRCFNITVGELCAICLD
PSRDQTKICVVEEPLDVLAIERTGAYRGLYHVLHGHIAPLEGIYREDLKIEELLARVRSEPVQEVILATNPNTEGEATAF
LLLRDLAPLGVRVTRPARGLPTGGDLEWADPETLGSAFEGRREL

Sequences:

>Translated_204_residues
MTVRTDQLIAAPVARLIEEFAKLPGIGPKTASRLTFYLLRAEPKQALALAQAILDVKEQVGYCRRCFNITVGELCAICLD
PSRDQTKICVVEEPLDVLAIERTGAYRGLYHVLHGHIAPLEGIYREDLKIEELLARVRSEPVQEVILATNPNTEGEATAF
LLLRDLAPLGVRVTRPARGLPTGGDLEWADPETLGSAFEGRREL
>Mature_203_residues
TVRTDQLIAAPVARLIEEFAKLPGIGPKTASRLTFYLLRAEPKQALALAQAILDVKEQVGYCRRCFNITVGELCAICLDP
SRDQTKICVVEEPLDVLAIERTGAYRGLYHVLHGHIAPLEGIYREDLKIEELLARVRSEPVQEVILATNPNTEGEATAFL
LLRDLAPLGVRVTRPARGLPTGGDLEWADPETLGSAFEGRREL

Specific function: May play a role in DNA repair. It seems to be involved in an recBC-independent recombinational process of DNA repair. It may act with recF and recO [H]

COG id: COG0353

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Toprim domain [H]

Homologues:

Organism=Escherichia coli, GI1786678, Length=193, Percent_Identity=42.4870466321244, Blast_Score=162, Evalue=2e-41,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003583
- InterPro:   IPR000093
- InterPro:   IPR006171
- InterPro:   IPR015967 [H]

Pfam domain/function: PF02132 RecR; PF01751 Toprim [H]

EC number: NA

Molecular weight: Translated: 22496; Mature: 22365

Theoretical pI: Translated: 5.15; Mature: 5.15

Prosite motif: PS01300 RECR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVRTDQLIAAPVARLIEEFAKLPGIGPKTASRLTFYLLRAEPKQALALAQAILDVKEQV
CCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHEEEEEECCHHHHHHHHHHHHHHHHHH
GYCRRCFNITVGELCAICLDPSRDQTKICVVEEPLDVLAIERTGAYRGLYHVLHGHIAPL
HHHHHHHCCCHHHHHHHHCCCCCCCCEEEEEECCCCEEEEECCCHHHHHHHHHHCCCCCH
EGIYREDLKIEELLARVRSEPVQEVILATNPNTEGEATAFLLLRDLAPLGVRVTRPARGL
HHHHHHCCCHHHHHHHHHCCHHHHEEEECCCCCCCHHHHHHHHHHHCCCCEEEECCCCCC
PTGGDLEWADPETLGSAFEGRREL
CCCCCCCCCCHHHHHHHHCCCCCC
>Mature Secondary Structure 
TVRTDQLIAAPVARLIEEFAKLPGIGPKTASRLTFYLLRAEPKQALALAQAILDVKEQV
CCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHEEEEEECCHHHHHHHHHHHHHHHHHH
GYCRRCFNITVGELCAICLDPSRDQTKICVVEEPLDVLAIERTGAYRGLYHVLHGHIAPL
HHHHHHHCCCHHHHHHHHCCCCCCCCEEEEEECCCCEEEEECCCHHHHHHHHHHCCCCCH
EGIYREDLKIEELLARVRSEPVQEVILATNPNTEGEATAFLLLRDLAPLGVRVTRPARGL
HHHHHHCCCHHHHHHHHHCCHHHHEEEECCCCCCCHHHHHHHHHHHCCCCEEEECCCCCC
PTGGDLEWADPETLGSAFEGRREL
CCCCCCCCCCHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA