| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222523802
Identifier: 222523802
GI number: 222523802
Start: 608852
End: 610276
Strand: Reverse
Name: 222523802
Synonym: Chy400_0510
Alternate gene names: NA
Gene position: 610276-608852 (Counterclockwise)
Preceding gene: 222523804
Following gene: 222523801
Centisome position: 11.58
GC content: 56.98
Gene sequence:
>1425_bases ATGGCAGCTATGAGAACATCAACGGTTGCAACACATGATCGATTGGTAGCGCAACGACGTACCTTACGCATTGCGTGGCT GACGCTTTTCGTCTTTTTTGGTTTGTTCCTCGCCCTGAGTTCGTGGGTGGTGTGGAATATCCGTCAGTGGTATCTGACGG CGACCGACGTACAGACCGCGATTCTGGTCGTGCGTGGTTCCGATGAAAGTATCGTCTGGCAGCCGGCCGGTCGCACTATT TTTCAGGGGGTGCGCGATCAGCAACCGCTGAGTGAGGGGGAAGCGGTGCGTACCCTGCCTAATGCCGGCTACGGGCAGGT GGCCTCGTTACGTCTGTTCGAGGGTAGTCAACTTGATCTGTGGGCCGGCACCGAACTACGGCTGACAACGCTGCGCACCA CCCGCTGGCATAGTGGTACGTTACAGGTTGCGCTTGAACAGACGAATGGGTACGTGCGCTACGATGTGCGCGGCGATCAA CCGTTTCAAAATGTGTTCTTCACCGTTACTGTAGGCGATGCCCAGGTCAAATTATTACCCGGTGGGAGTTATAGCATTAA TCTTTACCCACCCGAACGGCGGGTGATCCGGAGTGATGGTCGCCCGGCATTGATAGCCGATGTTGCTGTGCGCAGCGGGA GTGCTATCGTTACCGGTGTGGTTGGTCAACCTGTACGCCTGGCCGCCGGACAGCGGATCGAGGTCGACCCGGCTGGAATC CCCGGTTTGCCGGTACCGGCACGCTGGGAGCTTATCCGCGATGGTGGTTTTTCCCGTTTTTCTGAGGTTGAGTATAACAA TACCACGCGCACCGATGACCCGACCCTACCGCGTTCAACCACCTGGCAGGTTTCAGGTACACCGAGTCTCCCCTTGCTTG AACGCGGTTTCTTCCGGTTGGCGCAAATCTGTCGCCCTCCTAACGATACGCTGGTTTGCCCCATCGAAGACTGGCGTACC GCAGCGTGGTTCTACCGGGTTGGTGGGCAGACCAAAGGCTTTGTCACCAGTATCCGCCAGCCGCTTGGTGTACAGGGGGC CGGGATTGATGTGTCCGAGTTTCGTTCCCTGGTCTTTTCACTGTGGGCGCGGGTGGATTATCAATCATTACCGGCAGCGG GTGATCGCGGCACTGAGTGCCCGGTGATGATCCGCATTGTTGCCCGCCGCAGCAGTCCAGCCGATCCCGACGAGGAACGT GTAGTTTGTATCTACACGGCCACCAGTGATGATGCGTTGCGGGTGCGTGCCGATGGGGTTTTTTACCTGCGCGTCGAACC ATCAACCTGGACCCAATTCCGGGTTGATTTGCGCGATGAGAACTGGTTGCCCGATTATCGTTATCTGCGCAGTGTTGAGA TTTATGCCAATGGCCATGATTATGACGCACGAGTGGCCGAGGTGTCATTGGTTGGAACGCAATAG
Upstream 100 bases:
>100_bases TGTCGCTATCAATCTGAGGAAGAGTATCCTGCCGATAACCATTTCATCGTATCATTGGCAGGGTTGATTTCTGGCAAGCG CGAGGTTGGCCTGGAGTATA
Downstream 100 bases:
>100_bases GTTGCCTTATGCTGTATCACGGGGTCGATCTGGTAGAGGTGGCGCGTATCCGGCACGCAGTTGTGCGCTATGGTCAGCGG TTTGTGCAGCGGGTGTATAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 474; Mature: 473
Protein sequence:
>474_residues MAAMRTSTVATHDRLVAQRRTLRIAWLTLFVFFGLFLALSSWVVWNIRQWYLTATDVQTAILVVRGSDESIVWQPAGRTI FQGVRDQQPLSEGEAVRTLPNAGYGQVASLRLFEGSQLDLWAGTELRLTTLRTTRWHSGTLQVALEQTNGYVRYDVRGDQ PFQNVFFTVTVGDAQVKLLPGGSYSINLYPPERRVIRSDGRPALIADVAVRSGSAIVTGVVGQPVRLAAGQRIEVDPAGI PGLPVPARWELIRDGGFSRFSEVEYNNTTRTDDPTLPRSTTWQVSGTPSLPLLERGFFRLAQICRPPNDTLVCPIEDWRT AAWFYRVGGQTKGFVTSIRQPLGVQGAGIDVSEFRSLVFSLWARVDYQSLPAAGDRGTECPVMIRIVARRSSPADPDEER VVCIYTATSDDALRVRADGVFYLRVEPSTWTQFRVDLRDENWLPDYRYLRSVEIYANGHDYDARVAEVSLVGTQ
Sequences:
>Translated_474_residues MAAMRTSTVATHDRLVAQRRTLRIAWLTLFVFFGLFLALSSWVVWNIRQWYLTATDVQTAILVVRGSDESIVWQPAGRTI FQGVRDQQPLSEGEAVRTLPNAGYGQVASLRLFEGSQLDLWAGTELRLTTLRTTRWHSGTLQVALEQTNGYVRYDVRGDQ PFQNVFFTVTVGDAQVKLLPGGSYSINLYPPERRVIRSDGRPALIADVAVRSGSAIVTGVVGQPVRLAAGQRIEVDPAGI PGLPVPARWELIRDGGFSRFSEVEYNNTTRTDDPTLPRSTTWQVSGTPSLPLLERGFFRLAQICRPPNDTLVCPIEDWRT AAWFYRVGGQTKGFVTSIRQPLGVQGAGIDVSEFRSLVFSLWARVDYQSLPAAGDRGTECPVMIRIVARRSSPADPDEER VVCIYTATSDDALRVRADGVFYLRVEPSTWTQFRVDLRDENWLPDYRYLRSVEIYANGHDYDARVAEVSLVGTQ >Mature_473_residues AAMRTSTVATHDRLVAQRRTLRIAWLTLFVFFGLFLALSSWVVWNIRQWYLTATDVQTAILVVRGSDESIVWQPAGRTIF QGVRDQQPLSEGEAVRTLPNAGYGQVASLRLFEGSQLDLWAGTELRLTTLRTTRWHSGTLQVALEQTNGYVRYDVRGDQP FQNVFFTVTVGDAQVKLLPGGSYSINLYPPERRVIRSDGRPALIADVAVRSGSAIVTGVVGQPVRLAAGQRIEVDPAGIP GLPVPARWELIRDGGFSRFSEVEYNNTTRTDDPTLPRSTTWQVSGTPSLPLLERGFFRLAQICRPPNDTLVCPIEDWRTA AWFYRVGGQTKGFVTSIRQPLGVQGAGIDVSEFRSLVFSLWARVDYQSLPAAGDRGTECPVMIRIVARRSSPADPDEERV VCIYTATSDDALRVRADGVFYLRVEPSTWTQFRVDLRDENWLPDYRYLRSVEIYANGHDYDARVAEVSLVGTQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53036; Mature: 52904
Theoretical pI: Translated: 7.92; Mature: 7.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAMRTSTVATHDRLVAQRRTLRIAWLTLFVFFGLFLALSSWVVWNIRQWYLTATDVQTA CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEEECCEEE ILVVRGSDESIVWQPAGRTIFQGVRDQQPLSEGEAVRTLPNAGYGQVASLRLFEGSQLDL EEEEECCCCEEEEECCCHHHHHCCCCCCCCCCCCCEEECCCCCCCCEEEEEEECCCEEEE WAGTELRLTTLRTTRWHSGTLQVALEQTNGYVRYDVRGDQPFQNVFFTVTVGDAQVKLLP EECCEEEEEEEEEEEECCCEEEEEEEECCCEEEEEECCCCCCCCEEEEEEECCEEEEEEC GGSYSINLYPPERRVIRSDGRPALIADVAVRSGSAIVTGVVGQPVRLAAGQRIEVDPAGI CCCEEEEEECCCHHHHHCCCCCEEEEEEEECCCCEEEEECCCCCEEECCCCEEEECCCCC PGLPVPARWELIRDGGFSRFSEVEYNNTTRTDDPTLPRSTTWQVSGTPSLPLLERGFFRL CCCCCCCCEEEEECCCCCCCEEEECCCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHH AQICRPPNDTLVCPIEDWRTAAWFYRVGGQTKGFVTSIRQPLGVQGAGIDVSEFRSLVFS HHHHCCCCCCEEEECHHCCCEEEEEEECCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHH LWARVDYQSLPAAGDRGTECPVMIRIVARRSSPADPDEERVVCIYTATSDDALRVRADGV HHHHCCHHHCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCEEEEEEECCCCEEEEEECCE FYLRVEPSTWTQFRVDLRDENWLPDYRYLRSVEIYANGHDYDARVAEVSLVGTQ EEEEECCCCCEEEEEEECCCCCCCCCHHHEEEEEEECCCCCCCEEEEEEEEECC >Mature Secondary Structure AAMRTSTVATHDRLVAQRRTLRIAWLTLFVFFGLFLALSSWVVWNIRQWYLTATDVQTA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEEECCEEE ILVVRGSDESIVWQPAGRTIFQGVRDQQPLSEGEAVRTLPNAGYGQVASLRLFEGSQLDL EEEEECCCCEEEEECCCHHHHHCCCCCCCCCCCCCEEECCCCCCCCEEEEEEECCCEEEE WAGTELRLTTLRTTRWHSGTLQVALEQTNGYVRYDVRGDQPFQNVFFTVTVGDAQVKLLP EECCEEEEEEEEEEEECCCEEEEEEEECCCEEEEEECCCCCCCCEEEEEEECCEEEEEEC GGSYSINLYPPERRVIRSDGRPALIADVAVRSGSAIVTGVVGQPVRLAAGQRIEVDPAGI CCCEEEEEECCCHHHHHCCCCCEEEEEEEECCCCEEEEECCCCCEEECCCCEEEECCCCC PGLPVPARWELIRDGGFSRFSEVEYNNTTRTDDPTLPRSTTWQVSGTPSLPLLERGFFRL CCCCCCCCEEEEECCCCCCCEEEECCCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHH AQICRPPNDTLVCPIEDWRTAAWFYRVGGQTKGFVTSIRQPLGVQGAGIDVSEFRSLVFS HHHHCCCCCCEEEECHHCCCEEEEEEECCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHH LWARVDYQSLPAAGDRGTECPVMIRIVARRSSPADPDEERVVCIYTATSDDALRVRADGV HHHHCCHHHCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCEEEEEEECCCCEEEEEECCE FYLRVEPSTWTQFRVDLRDENWLPDYRYLRSVEIYANGHDYDARVAEVSLVGTQ EEEEECCCCCEEEEEEECCCCCCCCCHHHEEEEEEECCCCCCCEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA