Definition Chloroflexus sp. Y-400-fl chromosome, complete genome.
Accession NC_012032
Length 5,268,950

Click here to switch to the map view.

The map label for this gene is 222523802

Identifier: 222523802

GI number: 222523802

Start: 608852

End: 610276

Strand: Reverse

Name: 222523802

Synonym: Chy400_0510

Alternate gene names: NA

Gene position: 610276-608852 (Counterclockwise)

Preceding gene: 222523804

Following gene: 222523801

Centisome position: 11.58

GC content: 56.98

Gene sequence:

>1425_bases
ATGGCAGCTATGAGAACATCAACGGTTGCAACACATGATCGATTGGTAGCGCAACGACGTACCTTACGCATTGCGTGGCT
GACGCTTTTCGTCTTTTTTGGTTTGTTCCTCGCCCTGAGTTCGTGGGTGGTGTGGAATATCCGTCAGTGGTATCTGACGG
CGACCGACGTACAGACCGCGATTCTGGTCGTGCGTGGTTCCGATGAAAGTATCGTCTGGCAGCCGGCCGGTCGCACTATT
TTTCAGGGGGTGCGCGATCAGCAACCGCTGAGTGAGGGGGAAGCGGTGCGTACCCTGCCTAATGCCGGCTACGGGCAGGT
GGCCTCGTTACGTCTGTTCGAGGGTAGTCAACTTGATCTGTGGGCCGGCACCGAACTACGGCTGACAACGCTGCGCACCA
CCCGCTGGCATAGTGGTACGTTACAGGTTGCGCTTGAACAGACGAATGGGTACGTGCGCTACGATGTGCGCGGCGATCAA
CCGTTTCAAAATGTGTTCTTCACCGTTACTGTAGGCGATGCCCAGGTCAAATTATTACCCGGTGGGAGTTATAGCATTAA
TCTTTACCCACCCGAACGGCGGGTGATCCGGAGTGATGGTCGCCCGGCATTGATAGCCGATGTTGCTGTGCGCAGCGGGA
GTGCTATCGTTACCGGTGTGGTTGGTCAACCTGTACGCCTGGCCGCCGGACAGCGGATCGAGGTCGACCCGGCTGGAATC
CCCGGTTTGCCGGTACCGGCACGCTGGGAGCTTATCCGCGATGGTGGTTTTTCCCGTTTTTCTGAGGTTGAGTATAACAA
TACCACGCGCACCGATGACCCGACCCTACCGCGTTCAACCACCTGGCAGGTTTCAGGTACACCGAGTCTCCCCTTGCTTG
AACGCGGTTTCTTCCGGTTGGCGCAAATCTGTCGCCCTCCTAACGATACGCTGGTTTGCCCCATCGAAGACTGGCGTACC
GCAGCGTGGTTCTACCGGGTTGGTGGGCAGACCAAAGGCTTTGTCACCAGTATCCGCCAGCCGCTTGGTGTACAGGGGGC
CGGGATTGATGTGTCCGAGTTTCGTTCCCTGGTCTTTTCACTGTGGGCGCGGGTGGATTATCAATCATTACCGGCAGCGG
GTGATCGCGGCACTGAGTGCCCGGTGATGATCCGCATTGTTGCCCGCCGCAGCAGTCCAGCCGATCCCGACGAGGAACGT
GTAGTTTGTATCTACACGGCCACCAGTGATGATGCGTTGCGGGTGCGTGCCGATGGGGTTTTTTACCTGCGCGTCGAACC
ATCAACCTGGACCCAATTCCGGGTTGATTTGCGCGATGAGAACTGGTTGCCCGATTATCGTTATCTGCGCAGTGTTGAGA
TTTATGCCAATGGCCATGATTATGACGCACGAGTGGCCGAGGTGTCATTGGTTGGAACGCAATAG

Upstream 100 bases:

>100_bases
TGTCGCTATCAATCTGAGGAAGAGTATCCTGCCGATAACCATTTCATCGTATCATTGGCAGGGTTGATTTCTGGCAAGCG
CGAGGTTGGCCTGGAGTATA

Downstream 100 bases:

>100_bases
GTTGCCTTATGCTGTATCACGGGGTCGATCTGGTAGAGGTGGCGCGTATCCGGCACGCAGTTGTGCGCTATGGTCAGCGG
TTTGTGCAGCGGGTGTATAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 474; Mature: 473

Protein sequence:

>474_residues
MAAMRTSTVATHDRLVAQRRTLRIAWLTLFVFFGLFLALSSWVVWNIRQWYLTATDVQTAILVVRGSDESIVWQPAGRTI
FQGVRDQQPLSEGEAVRTLPNAGYGQVASLRLFEGSQLDLWAGTELRLTTLRTTRWHSGTLQVALEQTNGYVRYDVRGDQ
PFQNVFFTVTVGDAQVKLLPGGSYSINLYPPERRVIRSDGRPALIADVAVRSGSAIVTGVVGQPVRLAAGQRIEVDPAGI
PGLPVPARWELIRDGGFSRFSEVEYNNTTRTDDPTLPRSTTWQVSGTPSLPLLERGFFRLAQICRPPNDTLVCPIEDWRT
AAWFYRVGGQTKGFVTSIRQPLGVQGAGIDVSEFRSLVFSLWARVDYQSLPAAGDRGTECPVMIRIVARRSSPADPDEER
VVCIYTATSDDALRVRADGVFYLRVEPSTWTQFRVDLRDENWLPDYRYLRSVEIYANGHDYDARVAEVSLVGTQ

Sequences:

>Translated_474_residues
MAAMRTSTVATHDRLVAQRRTLRIAWLTLFVFFGLFLALSSWVVWNIRQWYLTATDVQTAILVVRGSDESIVWQPAGRTI
FQGVRDQQPLSEGEAVRTLPNAGYGQVASLRLFEGSQLDLWAGTELRLTTLRTTRWHSGTLQVALEQTNGYVRYDVRGDQ
PFQNVFFTVTVGDAQVKLLPGGSYSINLYPPERRVIRSDGRPALIADVAVRSGSAIVTGVVGQPVRLAAGQRIEVDPAGI
PGLPVPARWELIRDGGFSRFSEVEYNNTTRTDDPTLPRSTTWQVSGTPSLPLLERGFFRLAQICRPPNDTLVCPIEDWRT
AAWFYRVGGQTKGFVTSIRQPLGVQGAGIDVSEFRSLVFSLWARVDYQSLPAAGDRGTECPVMIRIVARRSSPADPDEER
VVCIYTATSDDALRVRADGVFYLRVEPSTWTQFRVDLRDENWLPDYRYLRSVEIYANGHDYDARVAEVSLVGTQ
>Mature_473_residues
AAMRTSTVATHDRLVAQRRTLRIAWLTLFVFFGLFLALSSWVVWNIRQWYLTATDVQTAILVVRGSDESIVWQPAGRTIF
QGVRDQQPLSEGEAVRTLPNAGYGQVASLRLFEGSQLDLWAGTELRLTTLRTTRWHSGTLQVALEQTNGYVRYDVRGDQP
FQNVFFTVTVGDAQVKLLPGGSYSINLYPPERRVIRSDGRPALIADVAVRSGSAIVTGVVGQPVRLAAGQRIEVDPAGIP
GLPVPARWELIRDGGFSRFSEVEYNNTTRTDDPTLPRSTTWQVSGTPSLPLLERGFFRLAQICRPPNDTLVCPIEDWRTA
AWFYRVGGQTKGFVTSIRQPLGVQGAGIDVSEFRSLVFSLWARVDYQSLPAAGDRGTECPVMIRIVARRSSPADPDEERV
VCIYTATSDDALRVRADGVFYLRVEPSTWTQFRVDLRDENWLPDYRYLRSVEIYANGHDYDARVAEVSLVGTQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 53036; Mature: 52904

Theoretical pI: Translated: 7.92; Mature: 7.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAMRTSTVATHDRLVAQRRTLRIAWLTLFVFFGLFLALSSWVVWNIRQWYLTATDVQTA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEEECCEEE
ILVVRGSDESIVWQPAGRTIFQGVRDQQPLSEGEAVRTLPNAGYGQVASLRLFEGSQLDL
EEEEECCCCEEEEECCCHHHHHCCCCCCCCCCCCCEEECCCCCCCCEEEEEEECCCEEEE
WAGTELRLTTLRTTRWHSGTLQVALEQTNGYVRYDVRGDQPFQNVFFTVTVGDAQVKLLP
EECCEEEEEEEEEEEECCCEEEEEEEECCCEEEEEECCCCCCCCEEEEEEECCEEEEEEC
GGSYSINLYPPERRVIRSDGRPALIADVAVRSGSAIVTGVVGQPVRLAAGQRIEVDPAGI
CCCEEEEEECCCHHHHHCCCCCEEEEEEEECCCCEEEEECCCCCEEECCCCEEEECCCCC
PGLPVPARWELIRDGGFSRFSEVEYNNTTRTDDPTLPRSTTWQVSGTPSLPLLERGFFRL
CCCCCCCCEEEEECCCCCCCEEEECCCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHH
AQICRPPNDTLVCPIEDWRTAAWFYRVGGQTKGFVTSIRQPLGVQGAGIDVSEFRSLVFS
HHHHCCCCCCEEEECHHCCCEEEEEEECCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHH
LWARVDYQSLPAAGDRGTECPVMIRIVARRSSPADPDEERVVCIYTATSDDALRVRADGV
HHHHCCHHHCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCEEEEEEECCCCEEEEEECCE
FYLRVEPSTWTQFRVDLRDENWLPDYRYLRSVEIYANGHDYDARVAEVSLVGTQ
EEEEECCCCCEEEEEEECCCCCCCCCHHHEEEEEEECCCCCCCEEEEEEEEECC
>Mature Secondary Structure 
AAMRTSTVATHDRLVAQRRTLRIAWLTLFVFFGLFLALSSWVVWNIRQWYLTATDVQTA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEEECCEEE
ILVVRGSDESIVWQPAGRTIFQGVRDQQPLSEGEAVRTLPNAGYGQVASLRLFEGSQLDL
EEEEECCCCEEEEECCCHHHHHCCCCCCCCCCCCCEEECCCCCCCCEEEEEEECCCEEEE
WAGTELRLTTLRTTRWHSGTLQVALEQTNGYVRYDVRGDQPFQNVFFTVTVGDAQVKLLP
EECCEEEEEEEEEEEECCCEEEEEEEECCCEEEEEECCCCCCCCEEEEEEECCEEEEEEC
GGSYSINLYPPERRVIRSDGRPALIADVAVRSGSAIVTGVVGQPVRLAAGQRIEVDPAGI
CCCEEEEEECCCHHHHHCCCCCEEEEEEEECCCCEEEEECCCCCEEECCCCEEEECCCCC
PGLPVPARWELIRDGGFSRFSEVEYNNTTRTDDPTLPRSTTWQVSGTPSLPLLERGFFRL
CCCCCCCCEEEEECCCCCCCEEEECCCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHH
AQICRPPNDTLVCPIEDWRTAAWFYRVGGQTKGFVTSIRQPLGVQGAGIDVSEFRSLVFS
HHHHCCCCCCEEEECHHCCCEEEEEEECCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHH
LWARVDYQSLPAAGDRGTECPVMIRIVARRSSPADPDEERVVCIYTATSDDALRVRADGV
HHHHCCHHHCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCEEEEEEECCCCEEEEEECCE
FYLRVEPSTWTQFRVDLRDENWLPDYRYLRSVEIYANGHDYDARVAEVSLVGTQ
EEEEECCCCCEEEEEEECCCCCCCCCHHHEEEEEEECCCCCCCEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA