| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222523795
Identifier: 222523795
GI number: 222523795
Start: 601917
End: 603290
Strand: Reverse
Name: 222523795
Synonym: Chy400_0503
Alternate gene names: NA
Gene position: 603290-601917 (Counterclockwise)
Preceding gene: 222523796
Following gene: 222523792
Centisome position: 11.45
GC content: 58.66
Gene sequence:
>1374_bases ATGACTCGCCTGTTCCGCACGATATTTCTGGCTGCGTTTGAAGCAACGGTTGTCGGGTTGCCGTTCCTGGCGCTGACGAC CATTGCCTTGTCGTGGCCGGGGCTATTCAGCGCCGTCGTGCTGGGACGGGTGGCTGATGAGGTCGGGAGTCGTCTGCGCT GGCCGTTTAATCGCTCGCTGCTCGTGCTGGCGCCAATAGTCGCGGCAGCCTGGCTGAGTTGGTTGACGTTCGGCCTCGAT CCGCTTACATTGCTCGCAGCGTTGCGTCCCGGCCAACCCCAAAGCGGCCCGATCTACCTGGCAGTGCTGGTTGCATTCTT TTTGGTCTGGCGTGGTGTGCGACTCGCTGACCACGACAGTGCTACTATTTTGACCCTGGCCGGACGTGGTGTGATCGGTG CGGTACTGGCACTCATCCTCGGTCCACTGTTGCGCGCAGGTGAAGCGGTTAGTAATGATCTGCTGCTGGTCTACATCATT GTCTTCGTGGGCAGTGGTCTTGCTGCGCTGGCGCTGACCCACGTTGTTGAGATGACATCCGATCAGGCTCAGTCACTGGA TGCAAGGTGGAGTCTTCTGCTTTTGGGCGTAATCGGTGCCGTGCTCGCTCTTGGTCTCAGTTTAGCCGCTCTCCTGAGCG GTGATCTGGCCCTTGAAGGAATGATCGCGCTTTTGCAACTGCTCCTCTTGCCGTTTGCACTCATCGGTGCCGCACTTGTC TATCTCATTACCGTTGTCTTTGGTGATGTGATACGTGCGCTCCTGGGGGTATTAGGCCGGGCACTGGCTCAGATGAATCT CCGTCCAGAGCCACCACCAACACCCGATACCGCAGTGGTTGATGATACTGCTGCAGAGACAGTTGTCGCCATTGCCCAAC AGGCAACCTTCCTGCTGGCACTGATCCCACTGGTAGCACTGGTTATCATCATCGTGCTTTGGCGACGACGGCACCGTCGT TCGGTGACCGATGAAGAACGTCAGTCGCTTGACATCGGGCAGAGTTTGATTGCCGACCTCCGCGATCTGTTTGGTTCGTT CCGGCGTCCCTTCCGGCGACACTTGCACGGCTTGCAAGCCGCACTGGCTGCCTTGCGAGGGGCAGACGCGGTATCGCGTG TGCGGCGAGCGTATATTCAGGCACTGCTCGCCCTGGAAGCTCAGGGCTGGCGACGCCCACCAGATCAGACACCGTCCGAA TGGTGTACACACGTCTCATCGGTGCTGCCCGACCAGCAGCCATTTATCGATCTGACCGCGACGTATGAACGGGCACGCTA TCGACCAGATGGGGTTGACGCCGATGAAGCTGATGCCGCCGAGCGTTCGTTACAGGGACTGCGTACATCACTATCATCAC AGCGTGCGCAATAA
Upstream 100 bases:
>100_bases GCGATATAACCGCTCCCGGTATTTTCTTTGCGCCGGTTGCGATCACTACGGTTTGCTGAGGTACGCCTTTTCCCACACCT GATCTGAAATCTGTTTTTTC
Downstream 100 bases:
>100_bases CTGTACCTGCTGTGACGTAGCTTCAGCGCCGGTATGGTTCTTCGGTATTCTGAGCAGTGATGCGATCCCGGAATGCCAGC CCACGAAGCTGGCGTAATGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 457; Mature: 456
Protein sequence:
>457_residues MTRLFRTIFLAAFEATVVGLPFLALTTIALSWPGLFSAVVLGRVADEVGSRLRWPFNRSLLVLAPIVAAAWLSWLTFGLD PLTLLAALRPGQPQSGPIYLAVLVAFFLVWRGVRLADHDSATILTLAGRGVIGAVLALILGPLLRAGEAVSNDLLLVYII VFVGSGLAALALTHVVEMTSDQAQSLDARWSLLLLGVIGAVLALGLSLAALLSGDLALEGMIALLQLLLLPFALIGAALV YLITVVFGDVIRALLGVLGRALAQMNLRPEPPPTPDTAVVDDTAAETVVAIAQQATFLLALIPLVALVIIIVLWRRRHRR SVTDEERQSLDIGQSLIADLRDLFGSFRRPFRRHLHGLQAALAALRGADAVSRVRRAYIQALLALEAQGWRRPPDQTPSE WCTHVSSVLPDQQPFIDLTATYERARYRPDGVDADEADAAERSLQGLRTSLSSQRAQ
Sequences:
>Translated_457_residues MTRLFRTIFLAAFEATVVGLPFLALTTIALSWPGLFSAVVLGRVADEVGSRLRWPFNRSLLVLAPIVAAAWLSWLTFGLD PLTLLAALRPGQPQSGPIYLAVLVAFFLVWRGVRLADHDSATILTLAGRGVIGAVLALILGPLLRAGEAVSNDLLLVYII VFVGSGLAALALTHVVEMTSDQAQSLDARWSLLLLGVIGAVLALGLSLAALLSGDLALEGMIALLQLLLLPFALIGAALV YLITVVFGDVIRALLGVLGRALAQMNLRPEPPPTPDTAVVDDTAAETVVAIAQQATFLLALIPLVALVIIIVLWRRRHRR SVTDEERQSLDIGQSLIADLRDLFGSFRRPFRRHLHGLQAALAALRGADAVSRVRRAYIQALLALEAQGWRRPPDQTPSE WCTHVSSVLPDQQPFIDLTATYERARYRPDGVDADEADAAERSLQGLRTSLSSQRAQ >Mature_456_residues TRLFRTIFLAAFEATVVGLPFLALTTIALSWPGLFSAVVLGRVADEVGSRLRWPFNRSLLVLAPIVAAAWLSWLTFGLDP LTLLAALRPGQPQSGPIYLAVLVAFFLVWRGVRLADHDSATILTLAGRGVIGAVLALILGPLLRAGEAVSNDLLLVYIIV FVGSGLAALALTHVVEMTSDQAQSLDARWSLLLLGVIGAVLALGLSLAALLSGDLALEGMIALLQLLLLPFALIGAALVY LITVVFGDVIRALLGVLGRALAQMNLRPEPPPTPDTAVVDDTAAETVVAIAQQATFLLALIPLVALVIIIVLWRRRHRRS VTDEERQSLDIGQSLIADLRDLFGSFRRPFRRHLHGLQAALAALRGADAVSRVRRAYIQALLALEAQGWRRPPDQTPSEW CTHVSSVLPDQQPFIDLTATYERARYRPDGVDADEADAAERSLQGLRTSLSSQRAQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49306; Mature: 49175
Theoretical pI: Translated: 7.77; Mature: 7.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRLFRTIFLAAFEATVVGLPFLALTTIALSWPGLFSAVVLGRVADEVGSRLRWPFNRSL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCCH LVLAPIVAAAWLSWLTFGLDPLTLLAALRPGQPQSGPIYLAVLVAFFLVWRGVRLADHDS HHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCEECCCC ATILTLAGRGVIGAVLALILGPLLRAGEAVSNDLLLVYIIVFVGSGLAALALTHVVEMTS CEEEEECCCCHHHHHHHHHHHHHHHHCHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHH DQAQSLDARWSLLLLGVIGAVLALGLSLAALLSGDLALEGMIALLQLLLLPFALIGAALV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YLITVVFGDVIRALLGVLGRALAQMNLRPEPPPTPDTAVVDDTAAETVVAIAQQATFLLA HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH LIPLVALVIIIVLWRRRHRRSVTDEERQSLDIGQSLIADLRDLFGSFRRPFRRHLHGLQA HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALAALRGADAVSRVRRAYIQALLALEAQGWRRPPDQTPSEWCTHVSSVLPDQQPFIDLTA HHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHH TYERARYRPDGVDADEADAAERSLQGLRTSLSSQRAQ HHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TRLFRTIFLAAFEATVVGLPFLALTTIALSWPGLFSAVVLGRVADEVGSRLRWPFNRSL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCCH LVLAPIVAAAWLSWLTFGLDPLTLLAALRPGQPQSGPIYLAVLVAFFLVWRGVRLADHDS HHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCEECCCC ATILTLAGRGVIGAVLALILGPLLRAGEAVSNDLLLVYIIVFVGSGLAALALTHVVEMTS CEEEEECCCCHHHHHHHHHHHHHHHHCHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHH DQAQSLDARWSLLLLGVIGAVLALGLSLAALLSGDLALEGMIALLQLLLLPFALIGAALV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YLITVVFGDVIRALLGVLGRALAQMNLRPEPPPTPDTAVVDDTAAETVVAIAQQATFLLA HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH LIPLVALVIIIVLWRRRHRRSVTDEERQSLDIGQSLIADLRDLFGSFRRPFRRHLHGLQA HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALAALRGADAVSRVRRAYIQALLALEAQGWRRPPDQTPSEWCTHVSSVLPDQQPFIDLTA HHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHH TYERARYRPDGVDADEADAAERSLQGLRTSLSSQRAQ HHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA