| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is hyi [C]
Identifier: 222523688
GI number: 222523688
Start: 464835
End: 465605
Strand: Reverse
Name: hyi [C]
Synonym: Chy400_0394
Alternate gene names: 222523688
Gene position: 465605-464835 (Counterclockwise)
Preceding gene: 222523689
Following gene: 222523687
Centisome position: 8.84
GC content: 56.68
Gene sequence:
>771_bases ATGTCGGCCCTCGCACCCCTCCGCTTCTCAGTCTGTCTCGATATGATCTTCACCGATCGCCCGTTTGAGCAGCGACTCGA ACACATTGCCGATCTCGGCTTCCGCGCCTATGAATTCTGGACGCGGAAGGGCAAGGACATGAACATCACCATTGCTCTGC AAACCGCCTTACGCCTGCATTGTGTGGCTATTTTCGGCAGCGAAGCAGCCCCCAATGATCCCGATCAGCGAGCACGCTTT CGTGATGAAGTGACGCGCAGTGCCGCGCTGGCAGTTGATCTGGCCTGTGATAACCTCATCGTTCACGGTGGGATTACCCG GACAGACCTCGATTATGCCACGCAACGCGCCCATCTGGTTGATGCGCTGCATGAGGCTGCCGAGACTGCGGCTGATGCCG GTCTTAATCTACTCCTCGAACCGCGCAACCCGGTCGATCATCCGGGTAGTTTTCTCTGGTCATCTGACGAAGGCTTTGCC ATCGTGCGCGAGCTTGGTCAACCGCACGTCAAACTGTTGTTTGATTGTTACCATCAACAGATCAGCGAAGGAAACCTGAC CCGTCGCATCCTGGCCAATCTCGATCTTATCGGCCACATCCACGTCGCCGACGTCCCCGGTCGCCATGAGCCGGGCACCG GTGAAATCAATTACGAGCACATCTTTGGCGTTTTGCGTGAACATGGGTATAGTGGCTATGTCGGTCTTGAATATACCCCG CGAATCGATGCGGCGGCCAGTCTGCGGGTGGTGCGGATGATGAGTCAGTGA
Upstream 100 bases:
>100_bases ACGATTTGACCGACCAGCCAGTCAGATGCATCATGATCGCCAGCGCTGCAACGGGTCGGTTGCGCCATAGGAGCTCTTGT GCAGAAAAGTGAGGTTGAAG
Downstream 100 bases:
>100_bases GCGTGAAGGGTGACATATTGTCACTACTGTGGTTCACTCAGAATGCTATAATAAAGCTAGCCAACGTTCCGACACTGCAT CGTAATCACTTTCTGGAGGC
Product: xylose isomerase domain-containing protein
Products: 2-hydroxy-3-oxopropanoate
Alternate protein names: ORF4 [H]
Number of amino acids: Translated: 256; Mature: 255
Protein sequence:
>256_residues MSALAPLRFSVCLDMIFTDRPFEQRLEHIADLGFRAYEFWTRKGKDMNITIALQTALRLHCVAIFGSEAAPNDPDQRARF RDEVTRSAALAVDLACDNLIVHGGITRTDLDYATQRAHLVDALHEAAETAADAGLNLLLEPRNPVDHPGSFLWSSDEGFA IVRELGQPHVKLLFDCYHQQISEGNLTRRILANLDLIGHIHVADVPGRHEPGTGEINYEHIFGVLREHGYSGYVGLEYTP RIDAAASLRVVRMMSQ
Sequences:
>Translated_256_residues MSALAPLRFSVCLDMIFTDRPFEQRLEHIADLGFRAYEFWTRKGKDMNITIALQTALRLHCVAIFGSEAAPNDPDQRARF RDEVTRSAALAVDLACDNLIVHGGITRTDLDYATQRAHLVDALHEAAETAADAGLNLLLEPRNPVDHPGSFLWSSDEGFA IVRELGQPHVKLLFDCYHQQISEGNLTRRILANLDLIGHIHVADVPGRHEPGTGEINYEHIFGVLREHGYSGYVGLEYTP RIDAAASLRVVRMMSQ >Mature_255_residues SALAPLRFSVCLDMIFTDRPFEQRLEHIADLGFRAYEFWTRKGKDMNITIALQTALRLHCVAIFGSEAAPNDPDQRARFR DEVTRSAALAVDLACDNLIVHGGITRTDLDYATQRAHLVDALHEAAETAADAGLNLLLEPRNPVDHPGSFLWSSDEGFAI VRELGQPHVKLLFDCYHQQISEGNLTRRILANLDLIGHIHVADVPGRHEPGTGEINYEHIFGVLREHGYSGYVGLEYTPR IDAAASLRVVRMMSQ
Specific function: Catalyzes The Reversible Isomerization Between Hydroxypyruvate And 2-Hydroxy-3-Oxopropanoate (Also Termed Tartronate Semialdehyde). [C]
COG id: COG3622
COG function: function code G; Hydroxypyruvate isomerase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the hyi family [H]
Homologues:
Organism=Homo sapiens, GI300068962, Length=267, Percent_Identity=31.0861423220974, Blast_Score=116, Evalue=2e-26, Organism=Homo sapiens, GI300068964, Length=250, Percent_Identity=30.4, Blast_Score=104, Evalue=6e-23, Organism=Escherichia coli, GI1786718, Length=253, Percent_Identity=33.201581027668, Blast_Score=128, Evalue=4e-31, Organism=Escherichia coli, GI1789095, Length=245, Percent_Identity=30.2040816326531, Blast_Score=110, Evalue=6e-26, Organism=Escherichia coli, GI87081874, Length=123, Percent_Identity=37.3983739837398, Blast_Score=66, Evalue=3e-12, Organism=Caenorhabditis elegans, GI17552022, Length=263, Percent_Identity=26.615969581749, Blast_Score=76, Evalue=2e-14, Organism=Drosophila melanogaster, GI17530883, Length=262, Percent_Identity=26.3358778625954, Blast_Score=100, Evalue=1e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013022 - InterPro: IPR012307 [H]
Pfam domain/function: PF01261 AP_endonuc_2 [H]
EC number: 5.3.1.22
Molecular weight: Translated: 28581; Mature: 28450
Theoretical pI: Translated: 5.87; Mature: 5.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSALAPLRFSVCLDMIFTDRPFEQRLEHIADLGFRAYEFWTRKGKDMNITIALQTALRLH CCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHCCCCEEEEEEEEHHHHHH CVAIFGSEAAPNDPDQRARFRDEVTRSAALAVDLACDNLIVHGGITRTDLDYATQRAHLV HHEEECCCCCCCCHHHHHHHHHHHHHHHHHEEEEECCCEEEECCCCCCHHHHHHHHHHHH DALHEAAETAADAGLNLLLEPRNPVDHPGSFLWSSDEGFAIVRELGQPHVKLLFDCYHQQ HHHHHHHHHHHHCCCEEEECCCCCCCCCCCEEEECCCCHHHHHHHCCHHHHHHHHHHHHH ISEGNLTRRILANLDLIGHIHVADVPGRHEPGTGEINYEHIFGVLREHGYSGYVGLEYTP HCCCCHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCEECCEECC RIDAAASLRVVRMMSQ CCCHHHHHHHHHHHCC >Mature Secondary Structure SALAPLRFSVCLDMIFTDRPFEQRLEHIADLGFRAYEFWTRKGKDMNITIALQTALRLH CCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHCCCCEEEEEEEEHHHHHH CVAIFGSEAAPNDPDQRARFRDEVTRSAALAVDLACDNLIVHGGITRTDLDYATQRAHLV HHEEECCCCCCCCHHHHHHHHHHHHHHHHHEEEEECCCEEEECCCCCCHHHHHHHHHHHH DALHEAAETAADAGLNLLLEPRNPVDHPGSFLWSSDEGFAIVRELGQPHVKLLFDCYHQQ HHHHHHHHHHHHCCCEEEECCCCCCCCCCCEEEECCCCHHHHHHHCCHHHHHHHHHHHHH ISEGNLTRRILANLDLIGHIHVADVPGRHEPGTGEINYEHIFGVLREHGYSGYVGLEYTP HCCCCHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCEECCEECC RIDAAASLRVVRMMSQ CCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): 10 {hydroxypyruvate}} [C]
Substrates: hydroxypyruvate
Specific reaction: hydroxypyruvate = 2-hydroxy-3-oxopropanoate; Other Name(s): hydroxypyruvate ketol-isomerase
General reaction: Intramolecular oxidoreduction; Isomerization [C]
Inhibitor: Cu2+; Fe2+; Hydroxy l amine; Iodoacetate; NaCN [C]
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7851418 [H]