| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222523682
Identifier: 222523682
GI number: 222523682
Start: 455776
End: 458634
Strand: Reverse
Name: 222523682
Synonym: Chy400_0388
Alternate gene names: NA
Gene position: 458634-455776 (Counterclockwise)
Preceding gene: 222523683
Following gene: 222523681
Centisome position: 8.7
GC content: 48.69
Gene sequence:
>2859_bases ATGTCATATGAACAGTTGTCTACTTCTCAGTCTCAAGTTAGCAGACTCATTGTGCGTGTTGAACACTATCAGTCCACACT TGGTATTGGCAATCCTTGTCCTCGCCTGTCCTGGATCATTGAAACAAATGCTACAAACTGGCTCCAGACTGCGTATGAGA TTGAATGCTACACCAAAGACGGCCGGGTCAGAGGTCGAACCGGCTGGATACACTCCCCGGAATCCGTTCTGGTACCCTGG CCGTTTGAACCGCTTACTTCGCGTGAGCAGGTATTAGTACGGGTTCGTGTGCGCGACAACAAAGGCGACATTTCACCCTG GAGCGAGATGCTGCCGATAGAAGCTGGTTTACTGAAAGTGGGTGATTGGAGTGCACGATTTATTACACCTGATTGGGATG ACGATATCTTAAAACCCCAGCCTTGTCCAATGCTACGGCATGAATTTCGTGTTGATAACGATGTAATTCAGGCACGCCTG TATATTACATCGTTAGGGGTATATGAAGCTCAAATCAATGGTGTTGTTGTAGGTGATCAGGTTTTAGCTCCTGGTTGGAC AGTCTATGATCGACGATTACGCTATCAGACATTTGATGTCACGATGCACTTGCGCGAAGGAATCAATGCGATTGGCGTGA TTTTAGGTGATGGGTGGTTTCGTGGGCGGCTTGGGTTTGGCGGGGGAAGACGTAATATCTACGGTAATCGACTTGCAGTG CTGGCTCAGCTTGAGATCACGTATCGTGATGGATCAACTCAACAGGTTTGCACCGATCAAACCTGGCGATCTACAACTGG GCCGATTCTGGCGAGCGATATTTATGATGGCGAAATATACGATGCACGTCTTGAATTGCCCAATTGGTCAAAACCTGGTT TTGCAGATCATCAATGGTCAGGCGTGCGTCTTCTTGAGTGGGATTTTAGTACGCTGGTAGCTCCTATCAGTCCACCAATA CGCAGGATTGAAATGGTACTACCAGTTGCCATCTTTTCTTCTCCCTCTGGACGTACCATTGTTGATTTTGGTCAAAATCT GGTTGGGCGAGTTCGTCTTACTGTAAGCGGTCCGCCTGGACAAATGATTACCGTGCGTCATGCTGAAGTGTTGGAAGGTG GTGAATTAAGCACGCGCCCTCTCCGCTTTGCTGCTGCCACTGATCGGTATATTTTGCGTGGAGATGGTACCGAGGTTTGG GAACCACGCTTTACGTTTCATGGATTTCGTTATGCTGAAATTGATGGTTGGCCCGGTGAACTACGTACAACAGATATTGT TGCGGTTGTAATCCATTCCGATATGGAGCGAATCGGCTGGTTTACATGCTCTGATCAACTGCTCAATCGGTTTCATGAGA ACGTCGTCTGGAGCATGCGCGGAAATTTTCTTGATGTACCAACCGATTGCCCTCAACGTGATGAACGCCTGGGATGGACG GGTGATATTCAGGTTTTTGCCCCTACAGCCGTATTTCTTTATGATGTTGCAGGATTGTTGCAATCGTGGTTGATTGATCT GGCTATTGAGCAGGAAAAATTGGGGGGGGCAGTGCCGCATGTCGTGCCAAATGTGTTAGGCCCCTCTGCTGCCGGTGCTG CGGCCTGGGGAGATGCAGCTACAGTAGTGCCATGGGTGCTGTTTCAACGCTACGGGGACAAAAGGGTCTTGGAAACTCAG TATAAGAGCATGCGATCATGGGTTGATTACATTGCTACCAAAGCTGGCCATACATATTTGTGGGATCGTGGCTTTCAGTT TGGCGACTGGCTGGACCCAACTGCACCACCAGATAAACCAGGGCAAGCACGTACTGATAAAGCGATAGTTGCGAGTGCCT ATTTCATTTTTTCGGCGACATTAGTTGCCAAAGCCGCACACGTGCTGGGTTATGATGCTGATGCTGATTTTTACGCAGAT CTTGCGCATAAAGCACGCTTTGCATTTGCTAAAGAGTATATTACCCCGGCCGGTCGTCTTATGTGTGATACAGAAACTGC GTATGCACTGGCACTGGTTTTCGATCTCTTCCCAACGGATACACAACGTCGTTATGCAGGTGAGCGATTGGCAGCATTGG TGCGTGATAGCGGCTATCATATCCGTACCGGCTTTGTGGGTACCCCTTTAATCTGCGATGCGTTGTGCAGTGTAGGGCAC TGTCGAGTCGCCTATCGGCTATTAATGCAACGTGAATGTCCTTCATGGCTTTATCCGGTAACGATGGGGGCAACAACCAT TTGGGAACGATGGGACTCAATGTTACCTGATGGTTCGATTAATCCAGGTGAGATGACATCATTCAATCATTATGCACTAG GAGCGGTAGCCGATTGGATGCATCGTACCATTGGAGGATTGATCCCCGTCGAACCTGGCTATCGCCGTATTGAATTTCGC CCTCAACCTGGTGGCGAAATTGTGTATGCACGGGTGTCGCATCGCACACCCTATGGATTGGCTGAGTGTTTCTGGCGTAT TGAAGAGGGTGTGTTTTACCTGCGCGTGGTAGTGCCACCGAATACAACTGCACAGGTTTTCCTTCCTGGACGTGATGATC AACCTCTTGATGTGGGTTCTGGTATCTGGCAATGGTCGATTCCTTGTCAGGATACAGCGACTCGTGGTTCGTACACAGTG GATGACTTGGTCGACGAGATTATAGACGATGAGGTAGCTCGTGAAGCTGTCAATCAGGTTTTGTCTCAAGTAGATGCCTG GCGTCTTTTTGGTAATTTACTGCTCAATGAGCGTAGCGCGTCATTGCGGGAAGCTATACAGGCACTTCCAAATAGCGAGA TAGTCATTGAGCGGTTGAATGCACTTCTGACCCGTATTCCTAAAAAGGATGGCATATAA
Upstream 100 bases:
>100_bases ATACTCTTCTTGTATCTAATTTTGAATAATGCGATTATGAAGGGACTTACTTCTGGAGCAGTTAAGGGTTAGATTGTTTT GCTTGAATGGAGCTATAACC
Downstream 100 bases:
>100_bases GGTCGGAAGAGGGCCGTTATGTTGGAGTCTTGTTGTCGAAGCTATGCTGGTAATCAATCTTTAGTATAGGGTGAGGTTGA TTCTAGATCCTGCTATGTGT
Product: alpha-L-rhamnosidase
Products: NA
Alternate protein names: Alpha-Rhamnosidase; Alfa-L-Rhamnosidase; Rhamnosidase; Glycoside Hydrolase Family; Hydrolase; Rhamnosidase A; Exported Rhamnosidase A; Secreted Hydrolase; Exported Rhamnosidase Protein; Alpha-L-Rhamnosidase Protein; Secreted Protein; Glycolsyl Hydrolase Family; Exported Rhamnosidase; Basic Proline-Rich Protein; Bacterial Alpha-L-Rhamnosidase Family; Alpha-L-Rhamnosidase N-Terminal Domain-Containing Protein; Glycosyl Hydrolase; Alpha-L-Rhamnosidase Domain-Containing Protein; Alpha-L-Rhamnosidase Domain Protein
Number of amino acids: Translated: 952; Mature: 951
Protein sequence:
>952_residues MSYEQLSTSQSQVSRLIVRVEHYQSTLGIGNPCPRLSWIIETNATNWLQTAYEIECYTKDGRVRGRTGWIHSPESVLVPW PFEPLTSREQVLVRVRVRDNKGDISPWSEMLPIEAGLLKVGDWSARFITPDWDDDILKPQPCPMLRHEFRVDNDVIQARL YITSLGVYEAQINGVVVGDQVLAPGWTVYDRRLRYQTFDVTMHLREGINAIGVILGDGWFRGRLGFGGGRRNIYGNRLAV LAQLEITYRDGSTQQVCTDQTWRSTTGPILASDIYDGEIYDARLELPNWSKPGFADHQWSGVRLLEWDFSTLVAPISPPI RRIEMVLPVAIFSSPSGRTIVDFGQNLVGRVRLTVSGPPGQMITVRHAEVLEGGELSTRPLRFAAATDRYILRGDGTEVW EPRFTFHGFRYAEIDGWPGELRTTDIVAVVIHSDMERIGWFTCSDQLLNRFHENVVWSMRGNFLDVPTDCPQRDERLGWT GDIQVFAPTAVFLYDVAGLLQSWLIDLAIEQEKLGGAVPHVVPNVLGPSAAGAAAWGDAATVVPWVLFQRYGDKRVLETQ YKSMRSWVDYIATKAGHTYLWDRGFQFGDWLDPTAPPDKPGQARTDKAIVASAYFIFSATLVAKAAHVLGYDADADFYAD LAHKARFAFAKEYITPAGRLMCDTETAYALALVFDLFPTDTQRRYAGERLAALVRDSGYHIRTGFVGTPLICDALCSVGH CRVAYRLLMQRECPSWLYPVTMGATTIWERWDSMLPDGSINPGEMTSFNHYALGAVADWMHRTIGGLIPVEPGYRRIEFR PQPGGEIVYARVSHRTPYGLAECFWRIEEGVFYLRVVVPPNTTAQVFLPGRDDQPLDVGSGIWQWSIPCQDTATRGSYTV DDLVDEIIDDEVAREAVNQVLSQVDAWRLFGNLLLNERSASLREAIQALPNSEIVIERLNALLTRIPKKDGI
Sequences:
>Translated_952_residues MSYEQLSTSQSQVSRLIVRVEHYQSTLGIGNPCPRLSWIIETNATNWLQTAYEIECYTKDGRVRGRTGWIHSPESVLVPW PFEPLTSREQVLVRVRVRDNKGDISPWSEMLPIEAGLLKVGDWSARFITPDWDDDILKPQPCPMLRHEFRVDNDVIQARL YITSLGVYEAQINGVVVGDQVLAPGWTVYDRRLRYQTFDVTMHLREGINAIGVILGDGWFRGRLGFGGGRRNIYGNRLAV LAQLEITYRDGSTQQVCTDQTWRSTTGPILASDIYDGEIYDARLELPNWSKPGFADHQWSGVRLLEWDFSTLVAPISPPI RRIEMVLPVAIFSSPSGRTIVDFGQNLVGRVRLTVSGPPGQMITVRHAEVLEGGELSTRPLRFAAATDRYILRGDGTEVW EPRFTFHGFRYAEIDGWPGELRTTDIVAVVIHSDMERIGWFTCSDQLLNRFHENVVWSMRGNFLDVPTDCPQRDERLGWT GDIQVFAPTAVFLYDVAGLLQSWLIDLAIEQEKLGGAVPHVVPNVLGPSAAGAAAWGDAATVVPWVLFQRYGDKRVLETQ YKSMRSWVDYIATKAGHTYLWDRGFQFGDWLDPTAPPDKPGQARTDKAIVASAYFIFSATLVAKAAHVLGYDADADFYAD LAHKARFAFAKEYITPAGRLMCDTETAYALALVFDLFPTDTQRRYAGERLAALVRDSGYHIRTGFVGTPLICDALCSVGH CRVAYRLLMQRECPSWLYPVTMGATTIWERWDSMLPDGSINPGEMTSFNHYALGAVADWMHRTIGGLIPVEPGYRRIEFR PQPGGEIVYARVSHRTPYGLAECFWRIEEGVFYLRVVVPPNTTAQVFLPGRDDQPLDVGSGIWQWSIPCQDTATRGSYTV DDLVDEIIDDEVAREAVNQVLSQVDAWRLFGNLLLNERSASLREAIQALPNSEIVIERLNALLTRIPKKDGI >Mature_951_residues SYEQLSTSQSQVSRLIVRVEHYQSTLGIGNPCPRLSWIIETNATNWLQTAYEIECYTKDGRVRGRTGWIHSPESVLVPWP FEPLTSREQVLVRVRVRDNKGDISPWSEMLPIEAGLLKVGDWSARFITPDWDDDILKPQPCPMLRHEFRVDNDVIQARLY ITSLGVYEAQINGVVVGDQVLAPGWTVYDRRLRYQTFDVTMHLREGINAIGVILGDGWFRGRLGFGGGRRNIYGNRLAVL AQLEITYRDGSTQQVCTDQTWRSTTGPILASDIYDGEIYDARLELPNWSKPGFADHQWSGVRLLEWDFSTLVAPISPPIR RIEMVLPVAIFSSPSGRTIVDFGQNLVGRVRLTVSGPPGQMITVRHAEVLEGGELSTRPLRFAAATDRYILRGDGTEVWE PRFTFHGFRYAEIDGWPGELRTTDIVAVVIHSDMERIGWFTCSDQLLNRFHENVVWSMRGNFLDVPTDCPQRDERLGWTG DIQVFAPTAVFLYDVAGLLQSWLIDLAIEQEKLGGAVPHVVPNVLGPSAAGAAAWGDAATVVPWVLFQRYGDKRVLETQY KSMRSWVDYIATKAGHTYLWDRGFQFGDWLDPTAPPDKPGQARTDKAIVASAYFIFSATLVAKAAHVLGYDADADFYADL AHKARFAFAKEYITPAGRLMCDTETAYALALVFDLFPTDTQRRYAGERLAALVRDSGYHIRTGFVGTPLICDALCSVGHC RVAYRLLMQRECPSWLYPVTMGATTIWERWDSMLPDGSINPGEMTSFNHYALGAVADWMHRTIGGLIPVEPGYRRIEFRP QPGGEIVYARVSHRTPYGLAECFWRIEEGVFYLRVVVPPNTTAQVFLPGRDDQPLDVGSGIWQWSIPCQDTATRGSYTVD DLVDEIIDDEVAREAVNQVLSQVDAWRLFGNLLLNERSASLREAIQALPNSEIVIERLNALLTRIPKKDGI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 107120; Mature: 106989
Theoretical pI: Translated: 5.33; Mature: 5.33
Prosite motif: PS00094 C5_MTASE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYEQLSTSQSQVSRLIVRVEHYQSTLGIGNPCPRLSWIIETNATNWLQTAYEIECYTKD CCHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCHHHCEEEEEEEEECC GRVRGRTGWIHSPESVLVPWPFEPLTSREQVLVRVRVRDNKGDISPWSEMLPIEAGLLKV CEEECCCCCCCCCCCEEEECCCCCCCCCCEEEEEEEEECCCCCCCCHHHCCCCCCCEEEE GDWSARFITPDWDDDILKPQPCPMLRHEFRVDNDVIQARLYITSLGVYEAQINGVVVGDQ CCCCEEEECCCCCCCCCCCCCCHHHHHHHCCCHHHHEEEEEEEECCEEEEEECCEEECCC VLAPGWTVYDRRLRYQTFDVTMHLREGINAIGVILGDGWFRGRLGFGGGRRNIYGNRLAV EECCCCCEEHHEEEEEEEEEEEEHHCCCCEEEEEEECCEEEEEECCCCCCCCCCCCEEEE LAQLEITYRDGSTQQVCTDQTWRSTTGPILASDIYDGEIYDARLELPNWSKPGFADHQWS EEEEEEEEECCCCCCCCCCCCCCCCCCCEEEECCCCCCEEEEEEECCCCCCCCCCCCCCC GVRLLEWDFSTLVAPISPPIRRIEMVLPVAIFSSPSGRTIVDFGQNLVGRVRLTVSGPPG CEEEEEECHHHHEECCCCHHHHHHHHEEEEEECCCCCCCHHHHCCCCEEEEEEEEECCCC QMITVRHAEVLEGGELSTRPLRFAAATDRYILRGDGTEVWEPRFTFHGFRYAEIDGWPGE CEEEEEEHHHHCCCCCCCCCEEEEECCCCEEEECCCCCCCCCCEEECCEEEEEECCCCCC LRTTDIVAVVIHSDMERIGWFTCSDQLLNRFHENVVWSMRGNFLDVPTDCPQRDERLGWT CCCCEEEEEEECCCHHHHCEEECHHHHHHHHHHHEEEEECCCEEECCCCCCCCHHCCCCC GDIQVFAPTAVFLYDVAGLLQSWLIDLAIEQEKLGGAVPHVVPNVLGPSAAGAAAWGDAA CCEEEEECHHHHHHHHHHHHHHHHHHHHEEHHHHCCCCCHHHHHHCCCCCCCCCCCCCCH TVVPWVLFQRYGDKRVLETQYKSMRSWVDYIATKAGHTYLWDRGFQFGDWLDPTAPPDKP HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCC GQARTDKAIVASAYFIFSATLVAKAAHVLGYDADADFYADLAHKARFAFAKEYITPAGRL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCE MCDTETAYALALVFDLFPTDTQRRYAGERLAALVRDSGYHIRTGFVGTPLICDALCSVGH EECCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHCCCH CRVAYRLLMQRECPSWLYPVTMGATTIWERWDSMLPDGSINPGEMTSFNHYALGAVADWM HHHHHHHHHHHCCCCCEEEHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHH HRTIGGLIPVEPGYRRIEFRPQPGGEIVYARVSHRTPYGLAECFWRIEEGVFYLRVVVPP HHHHCCCCCCCCCCEEEEEECCCCCCEEEEEECCCCCCCHHHHHHHHHCCEEEEEEEECC NTTAQVFLPGRDDQPLDVGSGIWQWSIPCQDTATRGSYTVDDLVDEIIDDEVAREAVNQV CCCEEEEECCCCCCCCCCCCCCEEEECCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHH LSQVDAWRLFGNLLLNERSASLREAIQALPNSEIVIERLNALLTRIPKKDGI HHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure SYEQLSTSQSQVSRLIVRVEHYQSTLGIGNPCPRLSWIIETNATNWLQTAYEIECYTKD CHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCHHHCEEEEEEEEECC GRVRGRTGWIHSPESVLVPWPFEPLTSREQVLVRVRVRDNKGDISPWSEMLPIEAGLLKV CEEECCCCCCCCCCCEEEECCCCCCCCCCEEEEEEEEECCCCCCCCHHHCCCCCCCEEEE GDWSARFITPDWDDDILKPQPCPMLRHEFRVDNDVIQARLYITSLGVYEAQINGVVVGDQ CCCCEEEECCCCCCCCCCCCCCHHHHHHHCCCHHHHEEEEEEEECCEEEEEECCEEECCC VLAPGWTVYDRRLRYQTFDVTMHLREGINAIGVILGDGWFRGRLGFGGGRRNIYGNRLAV EECCCCCEEHHEEEEEEEEEEEEHHCCCCEEEEEEECCEEEEEECCCCCCCCCCCCEEEE LAQLEITYRDGSTQQVCTDQTWRSTTGPILASDIYDGEIYDARLELPNWSKPGFADHQWS EEEEEEEEECCCCCCCCCCCCCCCCCCCEEEECCCCCCEEEEEEECCCCCCCCCCCCCCC GVRLLEWDFSTLVAPISPPIRRIEMVLPVAIFSSPSGRTIVDFGQNLVGRVRLTVSGPPG CEEEEEECHHHHEECCCCHHHHHHHHEEEEEECCCCCCCHHHHCCCCEEEEEEEEECCCC QMITVRHAEVLEGGELSTRPLRFAAATDRYILRGDGTEVWEPRFTFHGFRYAEIDGWPGE CEEEEEEHHHHCCCCCCCCCEEEEECCCCEEEECCCCCCCCCCEEECCEEEEEECCCCCC LRTTDIVAVVIHSDMERIGWFTCSDQLLNRFHENVVWSMRGNFLDVPTDCPQRDERLGWT CCCCEEEEEEECCCHHHHCEEECHHHHHHHHHHHEEEEECCCEEECCCCCCCCHHCCCCC GDIQVFAPTAVFLYDVAGLLQSWLIDLAIEQEKLGGAVPHVVPNVLGPSAAGAAAWGDAA CCEEEEECHHHHHHHHHHHHHHHHHHHHEEHHHHCCCCCHHHHHHCCCCCCCCCCCCCCH TVVPWVLFQRYGDKRVLETQYKSMRSWVDYIATKAGHTYLWDRGFQFGDWLDPTAPPDKP HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCC GQARTDKAIVASAYFIFSATLVAKAAHVLGYDADADFYADLAHKARFAFAKEYITPAGRL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCE MCDTETAYALALVFDLFPTDTQRRYAGERLAALVRDSGYHIRTGFVGTPLICDALCSVGH EECCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHCCCH CRVAYRLLMQRECPSWLYPVTMGATTIWERWDSMLPDGSINPGEMTSFNHYALGAVADWM HHHHHHHHHHHCCCCCEEEHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHH HRTIGGLIPVEPGYRRIEFRPQPGGEIVYARVSHRTPYGLAECFWRIEEGVFYLRVVVPP HHHHCCCCCCCCCCEEEEEECCCCCCEEEEEECCCCCCCHHHHHHHHHCCEEEEEEEECC NTTAQVFLPGRDDQPLDVGSGIWQWSIPCQDTATRGSYTVDDLVDEIIDDEVAREAVNQV CCCEEEEECCCCCCCCCCCCCCEEEECCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHH LSQVDAWRLFGNLLLNERSASLREAIQALPNSEIVIERLNALLTRIPKKDGI HHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA